RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 HMCN2Q8NDA2 5059 aa7.37□□□□□ -1.23
SMAD3-205ENST00000558428 KRTAP4-16G5E9R7 235 aaPredicted RBP7.37□□□□□ -1.23
SMAD3-205ENST00000558428 RPL13AP40429 203 aaKnown RBP7.36□□□□□ -1.23
SMAD3-205ENST00000558428 MUSTN1Q8IVN3 82 aa7.36□□□□□ -1.23
SMAD3-205ENST00000558428 LINC00518Q8N0U6 118 aa7.36□□□□□ -1.23
SMAD3-205ENST00000558428 PPDPFQ9H3Y8 114 aa7.36□□□□□ -1.23
SMAD3-205ENST00000558428 CBY1Q9Y3M2 126 aa7.36□□□□□ -1.23
SMAD3-205ENST00000558428 B5MCH6 92 aa7.35□□□□□ -1.23
SMAD3-205ENST00000558428 JOSD1Q15040 202 aaPredicted RBP7.35□□□□□ -1.23
SMAD3-205ENST00000558428 ANAPC11Q9NYG5 84 aa7.35□□□□□ -1.23
SMAD3-205ENST00000558428 A0A087X002 238 aa7.34□□□□□ -1.23
SMAD3-205ENST00000558428 ZNF73O43830 326 aaPredicted RBP7.34□□□□□ -1.23
SMAD3-205ENST00000558428 COX8AP10176 69 aa7.34□□□□□ -1.23
SMAD3-205ENST00000558428 CRYGAP11844 174 aa7.34□□□□□ -1.23
SMAD3-205ENST00000558428 SPATA45Q537H7 98 aa7.34□□□□□ -1.23
SMAD3-205ENST00000558428 PAM16Q9Y3D7 125 aa7.34□□□□□ -1.23
SMAD3-205ENST00000558428 SMCR5Q8TEV8 140 aa7.33□□□□□ -1.24
SMAD3-205ENST00000558428 VAMP8Q9BV40 100 aa7.33□□□□□ -1.24
SMAD3-205ENST00000558428 HINT1P49773 126 aaPredicted RBP7.32□□□□□ -1.24
SMAD3-205ENST00000558428 FAM229BQ4G0N7 80 aa7.32□□□□□ -1.24
SMAD3-205ENST00000558428 Q6ZRX8 168 aa7.32□□□□□ -1.24
SMAD3-205ENST00000558428 ZNF706Q9Y5V0 76 aaPredicted RBP7.32□□□□□ -1.24
SMAD3-205ENST00000558428 C14orf144Q96I85 54 aa7.31□□□□□ -1.24
SMAD3-205ENST00000558428 SPRR4Q96PI1 79 aa7.31□□□□□ -1.24
SMAD3-205ENST00000558428 Q9BRP9 147 aa7.31□□□□□ -1.24
SMAD3-205ENST00000558428 A6NDN8 102 aa7.3□□□□□ -1.24
SMAD3-205ENST00000558428 DLEU1O43261 78 aa7.3□□□□□ -1.24
SMAD3-205ENST00000558428 TYMSOSQ8TAI1 123 aa7.3□□□□□ -1.24
SMAD3-205ENST00000558428 TRAV13-2A0A0B4J235 113 aa7.29□□□□□ -1.24
SMAD3-205ENST00000558428 ERC2-IT1O76042 136 aa7.29□□□□□ -1.24
SMAD3-205ENST00000558428 KRTAP13-2Q52LG2 175 aa7.29□□□□□ -1.24
SMAD3-205ENST00000558428 PYY3Q5JQD4 70 aa7.29□□□□□ -1.24
SMAD3-205ENST00000558428 HIST1H4GQ99525 98 aa7.29□□□□□ -1.24
SMAD3-205ENST00000558428 C6orf99Q4VX62 202 aa7.28□□□□□ -1.24
SMAD3-205ENST00000558428 SLC25A34Q6PIV7 304 aa7.28□□□□□ -1.24
SMAD3-205ENST00000558428 A4D1N5 150 aa7.27□□□□□ -1.25
SMAD3-205ENST00000558428 COX7BP24311 80 aa7.26□□□□□ -1.25
SMAD3-205ENST00000558428 GAGE2AQ6NT46 116 aa7.26□□□□□ -1.25
SMAD3-205ENST00000558428 ELOF1P60002 83 aaKnown RBP7.25□□□□□ -1.25
SMAD3-205ENST00000558428 C3orf22Q8N5N4 141 aa7.25□□□□□ -1.25
SMAD3-205ENST00000558428 HIGD1BQ9P298 99 aa7.25□□□□□ -1.25
SMAD3-205ENST00000558428 LINC00483Q53H64 154 aa7.24□□□□□ -1.25
SMAD3-205ENST00000558428 C12orf57Q99622 126 aa7.24□□□□□ -1.25
SMAD3-205ENST00000558428 DHRS4-AS1Q9P1J3 65 aa7.24□□□□□ -1.25
SMAD3-205ENST00000558428 TRBV7-6A0A0J9YX20 115 aa7.23□□□□□ -1.25
SMAD3-205ENST00000558428 C2orf91Q6ZV80 131 aa7.23□□□□□ -1.25
SMAD3-205ENST00000558428 SMIM11BQ8TCY0 68 aa7.23□□□□□ -1.25
SMAD3-205ENST00000558428 A0A1B0GWB2 263 aa7.22□□□□□ -1.25
SMAD3-205ENST00000558428 TSPAN13O95857 204 aa7.22□□□□□ -1.25
SMAD3-205ENST00000558428 LINC00304Q8N9R0 145 aa7.22□□□□□ -1.25
SMAD3-205ENST00000558428 ST20-AS1Q8NBB2 130 aa7.22□□□□□ -1.25
SMAD3-205ENST00000558428 LRP2P98164 4655 aa7.21□□□□□ -1.26
SMAD3-205ENST00000558428 IGLV9-49A0A0B4J1Y8 123 aa7.19□□□□□ -1.26
SMAD3-205ENST00000558428 TAL2Q16559 108 aa7.19□□□□□ -1.26
SMAD3-205ENST00000558428 CFC1BP0CG36 223 aa7.18□□□□□ -1.26
SMAD3-205ENST00000558428 CFC1P0CG37 223 aa7.18□□□□□ -1.26
SMAD3-205ENST00000558428 MOBPQ13875 183 aa7.18□□□□□ -1.26
SMAD3-205ENST00000558428 VAMP3Q15836 100 aa7.18□□□□□ -1.26
SMAD3-205ENST00000558428 CEND1Q8N111 149 aa7.18□□□□□ -1.26
SMAD3-205ENST00000558428 RAB37Q96AX2 223 aa7.18□□□□□ -1.26
SMAD3-205ENST00000558428 Q8NBF4 154 aa7.17□□□□□ -1.26
SMAD3-205ENST00000558428 C4orf48Q5BLP8 95 aa7.16□□□□□ -1.26
SMAD3-205ENST00000558428 C9orf153Q5TBE3 101 aa7.16□□□□□ -1.26
SMAD3-205ENST00000558428 DEFB105AQ8NG35 78 aa7.16□□□□□ -1.26
SMAD3-205ENST00000558428 NHP2Q9NX24 153 aaKnown RBP7.16□□□□□ -1.26
SMAD3-205ENST00000558428 A0A0B4J2C4 111 aa7.15□□□□□ -1.26
SMAD3-205ENST00000558428 TMEM238LA0A1B0GVL6 79 aa7.15□□□□□ -1.26
SMAD3-205ENST00000558428 A6NJY4 79 aa7.15□□□□□ -1.26
SMAD3-205ENST00000558428 H7C2G1 150 aa7.15□□□□□ -1.26
SMAD3-205ENST00000558428 SLC25A20O43772 301 aa7.15□□□□□ -1.26
SMAD3-205ENST00000558428 SPRR1BP22528 89 aa7.15□□□□□ -1.26
SMAD3-205ENST00000558428 SPAG11AQ6PDA7 123 aa7.15□□□□□ -1.26
SMAD3-205ENST00000558428 UQCR10Q9UDW1 63 aa7.15□□□□□ -1.26
SMAD3-205ENST00000558428 FXYD2P54710 66 aa7.14□□□□□ -1.27
SMAD3-205ENST00000558428 HSD52Q0P140 79 aa7.14□□□□□ -1.27
SMAD3-205ENST00000558428 PRR4Q16378 134 aa7.14□□□□□ -1.27
SMAD3-205ENST00000558428 SSBP3-AS1Q7Z2R9 100 aa7.14□□□□□ -1.27
SMAD3-205ENST00000558428 UBR4Q5T4S7 5183 aa7.14□□□□□ -1.27
SMAD3-205ENST00000558428 TEX49A0A1B0GTD5 131 aa7.13□□□□□ -1.27
SMAD3-205ENST00000558428 CTAG1AP78358 180 aa7.13□□□□□ -1.27
SMAD3-205ENST00000558428 BVES-AS1Q5T3Y7 98 aa7.13□□□□□ -1.27
SMAD3-205ENST00000558428 LINC00575Q6W349 94 aa7.13□□□□□ -1.27
SMAD3-205ENST00000558428 LAMTOR3Q9UHA4 124 aa7.13□□□□□ -1.27
SMAD3-205ENST00000558428 LPAP08519 4548 aa7.13□□□□□ -1.27
SMAD3-205ENST00000558428 IGLV5-48A0A075B6I7 105 aa7.11□□□□□ -1.27
SMAD3-205ENST00000558428 hADV29S1A0JD25 119 aa7.11□□□□□ -1.27
SMAD3-205ENST00000558428 LINC01547P58512 204 aaPredicted RBP7.11□□□□□ -1.27
SMAD3-205ENST00000558428 Q1RN00 199 aa7.11□□□□□ -1.27
SMAD3-205ENST00000558428 PRO1854Q9UHT4 67 aa7.11□□□□□ -1.27
SMAD3-205ENST00000558428 SPINK1P00995 79 aa7.1□□□□□ -1.27
SMAD3-205ENST00000558428 RETNLBQ9BQ08 111 aa7.1□□□□□ -1.27
SMAD3-205ENST00000558428 SMIM6P0DI80 62 aa7.09□□□□□ -1.27
SMAD3-205ENST00000558428 PRO1933Q9H354 126 aa7.09□□□□□ -1.27
SMAD3-205ENST00000558428 Q6ZQY7 126 aa7.08□□□□□ -1.28
SMAD3-205ENST00000558428 Q8N377 158 aa7.08□□□□□ -1.28
SMAD3-205ENST00000558428 SMIM29Q86T20 159 aa7.07□□□□□ -1.28
SMAD3-205ENST00000558428 H0YGX0 51 aa7.06□□□□□ -1.28
SMAD3-205ENST00000558428 K7ERJ3 54 aa7.06□□□□□ -1.28
SMAD3-205ENST00000558428 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.06□□□□□ -1.28
SMAD3-205ENST00000558428 RPS29P62273 56 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms