RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 FAM19A3Q7Z5A8 133 aa2.91□□□□□ -1.94
ATXN3-243ENST00000556671 BOD1L2Q8IYS8 172 aa2.91□□□□□ -1.94
ATXN3-243ENST00000556671 PLAC8Q9NZF1 115 aa2.91□□□□□ -1.94
ATXN3-243ENST00000556671 PKHD1P08F94 4074 aa2.91□□□□□ -1.94
ATXN3-243ENST00000556671 FLG2Q5D862 2391 aaPredicted RBP2.9□□□□□ -1.94
ATXN3-243ENST00000556671 NDUFC2-KCTD14E9PQ53 114 aa2.9□□□□□ -1.95
ATXN3-243ENST00000556671 ZNF22P17026 224 aaPredicted RBP2.9□□□□□ -1.95
ATXN3-243ENST00000556671 C1orf137Q5JT78 98 aa2.9□□□□□ -1.95
ATXN3-243ENST00000556671 BVES-AS1Q5T3Y7 98 aa2.9□□□□□ -1.95
ATXN3-243ENST00000556671 GTF2H5Q6ZYL4 71 aa2.9□□□□□ -1.95
ATXN3-243ENST00000556671 TRAV12-1A0A0B4J245 112 aa2.89□□□□□ -1.95
ATXN3-243ENST00000556671 RPL37AP8A6NKH3 93 aa2.89□□□□□ -1.95
ATXN3-243ENST00000556671 K7ERU9 68 aa2.89□□□□□ -1.95
ATXN3-243ENST00000556671 M0QXV9 152 aa2.89□□□□□ -1.95
ATXN3-243ENST00000556671 TAX1BP3O14907 124 aa2.89□□□□□ -1.95
ATXN3-243ENST00000556671 DPM2O94777 84 aa2.89□□□□□ -1.95
ATXN3-243ENST00000556671 KRTAP1-4P0C5Y4 121 aa2.89□□□□□ -1.95
ATXN3-243ENST00000556671 CXCL5P42830 114 aa2.89□□□□□ -1.95
ATXN3-243ENST00000556671 HINT1P49773 126 aaPredicted RBP2.89□□□□□ -1.95
ATXN3-243ENST00000556671 KRTAP10-8P60410 259 aa2.89□□□□□ -1.95
ATXN3-243ENST00000556671 HSD52Q0P140 79 aa2.89□□□□□ -1.95
ATXN3-243ENST00000556671 CIRBPQ14011 172 aaKnown RBP2.89□□□□□ -1.95
ATXN3-243ENST00000556671 VAMP3Q15836 100 aa2.89□□□□□ -1.95
ATXN3-243ENST00000556671 MEIG1Q5JSS6 88 aa2.89□□□□□ -1.95
ATXN3-243ENST00000556671 NKAPP1Q8N9T2 125 aa2.89□□□□□ -1.95
ATXN3-243ENST00000556671 HIGD1BQ9P298 99 aa2.89□□□□□ -1.95
ATXN3-243ENST00000556671 SRRM2Q9UQ35 2752 aaKnown RBP2.89□□□□□ -1.95
ATXN3-243ENST00000556671 TMEM223A0PJW6 202 aa2.88□□□□□ -1.95
ATXN3-243ENST00000556671 IGKCP01834 107 aa2.88□□□□□ -1.95
ATXN3-243ENST00000556671 TLX1NBP0CAT3 122 aa2.88□□□□□ -1.95
ATXN3-243ENST00000556671 LGALS3P17931 250 aaKnown RBP2.88□□□□□ -1.95
ATXN3-243ENST00000556671 NDUFV3P56181 108 aaKnown RBP2.88□□□□□ -1.95
ATXN3-243ENST00000556671 HERVK_113P61574 105 aa2.88□□□□□ -1.95
ATXN3-243ENST00000556671 TAL2Q16559 108 aa2.88□□□□□ -1.95
ATXN3-243ENST00000556671 C9orf129Q5T035 196 aaKnown RBP2.88□□□□□ -1.95
ATXN3-243ENST00000556671 OCR1Q9BZK8 76 aa2.88□□□□□ -1.95
ATXN3-243ENST00000556671 ERG28Q9UKR5 140 aa2.88□□□□□ -1.95
ATXN3-243ENST00000556671 C22orf24Q9Y442 160 aa2.88□□□□□ -1.95
ATXN3-243ENST00000556671 MYMXA0A1B0GTQ4 84 aa2.87□□□□□ -1.95
ATXN3-243ENST00000556671 LEPROTO15243 131 aa2.87□□□□□ -1.95
ATXN3-243ENST00000556671 SMIM13P0DJ93 91 aa2.87□□□□□ -1.95
ATXN3-243ENST00000556671 PLNP26678 52 aa2.87□□□□□ -1.95
ATXN3-243ENST00000556671 PRR3P79522 188 aaKnown RBP2.87□□□□□ -1.95
ATXN3-243ENST00000556671 ATOH7Q8N100 152 aa2.87□□□□□ -1.95
ATXN3-243ENST00000556671 PLEKHB2Q96CS7 222 aa2.87□□□□□ -1.95
ATXN3-243ENST00000556671 NDUFA12Q9UI09 145 aa2.87□□□□□ -1.95
ATXN3-243ENST00000556671 PSORS1C2Q9UIG4 136 aa2.87□□□□□ -1.95
ATXN3-243ENST00000556671 DNAH11Q96DT5 4516 aa2.87□□□□□ -1.95
ATXN3-243ENST00000556671 NPC2P61916 151 aa2.86□□□□□ -1.95
ATXN3-243ENST00000556671 OCIAD2Q56VL3 154 aa2.86□□□□□ -1.95
ATXN3-243ENST00000556671 C2orf91Q6ZV80 131 aa2.86□□□□□ -1.95
ATXN3-243ENST00000556671 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
ATXN3-243ENST00000556671 LINC00167Q96N53 147 aa2.86□□□□□ -1.95
ATXN3-243ENST00000556671 SND1-IT1Q9HBX3 110 aa2.86□□□□□ -1.95
ATXN3-243ENST00000556671 KIAA1109Q2LD37 5005 aa2.85□□□□□ -1.95
ATXN3-243ENST00000556671 DYNC1H1Q14204 4646 aaKnown RBP2.85□□□□□ -1.95
ATXN3-243ENST00000556671 IGKV2-28A0A075B6P5 120 aa2.85□□□□□ -1.95
ATXN3-243ENST00000556671 J3QQQ9 107 aa2.85□□□□□ -1.95
ATXN3-243ENST00000556671 J3QR89 54 aa2.85□□□□□ -1.95
ATXN3-243ENST00000556671 K7EP34 96 aa2.85□□□□□ -1.95
ATXN3-243ENST00000556671 IGKV2D-28P01615 120 aa2.85□□□□□ -1.95
ATXN3-243ENST00000556671 IGLV7-43P04211 117 aa2.85□□□□□ -1.95
ATXN3-243ENST00000556671 FABP2P12104 132 aa2.85□□□□□ -1.95
ATXN3-243ENST00000556671 COX17Q14061 63 aa2.85□□□□□ -1.95
ATXN3-243ENST00000556671 SFTA2Q6UW10 78 aa2.85□□□□□ -1.95
ATXN3-243ENST00000556671 REG3GQ6UW15 175 aa2.85□□□□□ -1.95
ATXN3-243ENST00000556671 SPINK6Q6UWN8 80 aa2.85□□□□□ -1.95
ATXN3-243ENST00000556671 MRPL55Q7Z7F7 128 aaKnown RBP2.85□□□□□ -1.95
ATXN3-243ENST00000556671 KRTAP11-1Q8IUC1 163 aa2.85□□□□□ -1.95
ATXN3-243ENST00000556671 MIR7-3HGQ8N6C7 128 aa2.85□□□□□ -1.95
ATXN3-243ENST00000556671 DAND5Q8N907 189 aa2.85□□□□□ -1.95
ATXN3-243ENST00000556671 A0A1W2PPM0 123 aa2.84□□□□□ -1.95
ATXN3-243ENST00000556671 F8W1H4 67 aa2.84□□□□□ -1.95
ATXN3-243ENST00000556671 NCR3O14931 201 aa2.84□□□□□ -1.95
ATXN3-243ENST00000556671 OXTP01178 125 aa2.84□□□□□ -1.95
ATXN3-243ENST00000556671 SCGB1A1P11684 91 aa2.84□□□□□ -1.95
ATXN3-243ENST00000556671 UBE2AP49459 152 aa2.84□□□□□ -1.95
ATXN3-243ENST00000556671 KRTAP10-4P60372 401 aaPredicted RBP2.84□□□□□ -1.95
ATXN3-243ENST00000556671 DIRC1Q969H9 104 aa2.84□□□□□ -1.95
ATXN3-243ENST00000556671 DNAH5Q8TE73 4624 aa2.83□□□□□ -1.96
ATXN3-243ENST00000556671 A0A1B0GWB2 263 aa2.83□□□□□ -1.96
ATXN3-243ENST00000556671 ZNF815PA8K554 130 aa2.83□□□□□ -1.96
ATXN3-243ENST00000556671 NMUP48645 174 aa2.83□□□□□ -1.96
ATXN3-243ENST00000556671 TSPEAR-AS2P59090 65 aa2.83□□□□□ -1.96
ATXN3-243ENST00000556671 LYRM7Q5U5X0 104 aa2.83□□□□□ -1.96
ATXN3-243ENST00000556671 FAM19A1Q7Z5A9 133 aa2.83□□□□□ -1.96
ATXN3-243ENST00000556671 OR13C6PQ8NH95 151 aa2.83□□□□□ -1.96
ATXN3-243ENST00000556671 VPS25Q9BRG1 176 aa2.83□□□□□ -1.96
ATXN3-243ENST00000556671 HERC2O95714 4834 aa2.82□□□□□ -1.96
ATXN3-243ENST00000556671 TMEM238C9JI98 176 aa2.82□□□□□ -1.96
ATXN3-243ENST00000556671 E9PLD3 99 aa2.82□□□□□ -1.96
ATXN3-243ENST00000556671 H3BUT2 72 aa2.82□□□□□ -1.96
ATXN3-243ENST00000556671 M0R378 163 aa2.82□□□□□ -1.96
ATXN3-243ENST00000556671 RPL13AP40429 203 aaKnown RBP2.82□□□□□ -1.96
ATXN3-243ENST00000556671 RPL28P46779 137 aaKnown RBP2.82□□□□□ -1.96
ATXN3-243ENST00000556671 S100A7L2Q5SY68 101 aa2.82□□□□□ -1.96
ATXN3-243ENST00000556671 SCGB1D4Q6XE38 83 aa2.82□□□□□ -1.96
ATXN3-243ENST00000556671 CEND1Q8N111 149 aa2.82□□□□□ -1.96
ATXN3-243ENST00000556671 TTTY13Q9BZ97 58 aa2.82□□□□□ -1.96
ATXN3-243ENST00000556671 TP73-AS1Q9UF72 201 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms