RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 IGKV2D-28P01615 120 aa5.82□□□□□ -1.48
SRP54-210ENST00000556380 SOSTDC1Q6X4U4 206 aa5.82□□□□□ -1.48
SRP54-210ENST00000556380 ATOH7Q8N100 152 aa5.82□□□□□ -1.48
SRP54-210ENST00000556380 MIEN1Q9BRT3 115 aa5.82□□□□□ -1.48
SRP54-210ENST00000556380 HMCN2Q8NDA2 5059 aa5.82□□□□□ -1.48
SRP54-210ENST00000556380 NDUFC2O95298 119 aa5.81□□□□□ -1.48
SRP54-210ENST00000556380 KRTAP1-4P0C5Y4 121 aa5.81□□□□□ -1.48
SRP54-210ENST00000556380 COPS9Q8WXC6 57 aa5.81□□□□□ -1.48
SRP54-210ENST00000556380 TRBV10-2A0A0K0K1G8 114 aa5.8□□□□□ -1.48
SRP54-210ENST00000556380 ZNF815PA8K554 130 aa5.8□□□□□ -1.48
SRP54-210ENST00000556380 TMEM238C9JI98 176 aa5.8□□□□□ -1.48
SRP54-210ENST00000556380 Q6ZVH6 145 aa5.8□□□□□ -1.48
SRP54-210ENST00000556380 TMEM126AQ9H061 195 aa5.8□□□□□ -1.48
SRP54-210ENST00000556380 PPDPFQ9H3Y8 114 aa5.8□□□□□ -1.48
SRP54-210ENST00000556380 S100A12P80511 92 aa5.79□□□□□ -1.48
SRP54-210ENST00000556380 KCNQ1DNQ9H478 68 aa5.79□□□□□ -1.48
SRP54-210ENST00000556380 KRTAP4-16G5E9R7 235 aaPredicted RBP5.78□□□□□ -1.48
SRP54-210ENST00000556380 NCR3O14931 201 aa5.78□□□□□ -1.48
SRP54-210ENST00000556380 SCGB1D1O95968 90 aa5.78□□□□□ -1.48
SRP54-210ENST00000556380 SPRR1AP35321 89 aa5.78□□□□□ -1.48
SRP54-210ENST00000556380 RPL28P46779 137 aaKnown RBP5.78□□□□□ -1.48
SRP54-210ENST00000556380 SCGB1D4Q6XE38 83 aa5.78□□□□□ -1.48
SRP54-210ENST00000556380 PCP2Q8IVA1 136 aa5.78□□□□□ -1.48
SRP54-210ENST00000556380 LINC00308Q8TCZ7 52 aa5.78□□□□□ -1.48
SRP54-210ENST00000556380 SPANXB1Q9NS25 103 aaPredicted RBP5.78□□□□□ -1.48
SRP54-210ENST00000556380 CBY1Q9Y3M2 126 aa5.78□□□□□ -1.48
SRP54-210ENST00000556380 TRBV10-3A0A0K0K1G6 114 aa5.77□□□□□ -1.49
SRP54-210ENST00000556380 SPANXDQ9BXN6 97 aa5.77□□□□□ -1.49
SRP54-210ENST00000556380 SPANXCQ9NY87 97 aa5.77□□□□□ -1.49
SRP54-210ENST00000556380 PRYO14603 147 aa5.76□□□□□ -1.49
SRP54-210ENST00000556380 IGLV6-57P01721 117 aa5.76□□□□□ -1.49
SRP54-210ENST00000556380 IFITM1P13164 125 aa5.76□□□□□ -1.49
SRP54-210ENST00000556380 UBE2AP49459 152 aa5.76□□□□□ -1.49
SRP54-210ENST00000556380 NPC2P61916 151 aa5.76□□□□□ -1.49
SRP54-210ENST00000556380 PRLHP81277 87 aa5.75□□□□□ -1.49
SRP54-210ENST00000556380 JOSD1Q15040 202 aaPredicted RBP5.75□□□□□ -1.49
SRP54-210ENST00000556380 LINC00518Q8N0U6 118 aa5.75□□□□□ -1.49
SRP54-210ENST00000556380 LINC00337Q8N6G1 96 aa5.75□□□□□ -1.49
SRP54-210ENST00000556380 PRR26Q8N8Z3 221 aa5.75□□□□□ -1.49
SRP54-210ENST00000556380 DDTP30046 118 aa5.74□□□□□ -1.49
SRP54-210ENST00000556380 FAM19A1Q7Z5A9 133 aa5.74□□□□□ -1.49
SRP54-210ENST00000556380 DLEU1O43261 78 aa5.73□□□□□ -1.49
SRP54-210ENST00000556380 S100A7L2Q5SY68 101 aa5.72□□□□□ -1.49
SRP54-210ENST00000556380 A0A087X002 238 aa5.71□□□□□ -1.5
SRP54-210ENST00000556380 B5MCH6 92 aa5.71□□□□□ -1.5
SRP54-210ENST00000556380 COX8AP10176 69 aa5.71□□□□□ -1.5
SRP54-210ENST00000556380 MUSTN1Q8IVN3 82 aa5.71□□□□□ -1.5
SRP54-210ENST00000556380 VAMP8Q9BV40 100 aa5.71□□□□□ -1.5
SRP54-210ENST00000556380 ANAPC11Q9NYG5 84 aa5.71□□□□□ -1.5
SRP54-210ENST00000556380 ETDCA0A1B0GVM5 59 aa5.7□□□□□ -1.5
SRP54-210ENST00000556380 FAM229BQ4G0N7 80 aa5.7□□□□□ -1.5
SRP54-210ENST00000556380 SMCR5Q8TEV8 140 aa5.7□□□□□ -1.5
SRP54-210ENST00000556380 HIGD2AQ9BW72 106 aa5.7□□□□□ -1.5
SRP54-210ENST00000556380 TMA7Q9Y2S6 64 aaKnown RBP5.7□□□□□ -1.5
SRP54-210ENST00000556380 TRAV23DV6A0A075B6W5 121 aa5.69□□□□□ -1.5
SRP54-210ENST00000556380 RPL13AP40429 203 aaKnown RBP5.69□□□□□ -1.5
SRP54-210ENST00000556380 KRTAP13-2Q52LG2 175 aa5.69□□□□□ -1.5
SRP54-210ENST00000556380 ZNF73O43830 326 aaPredicted RBP5.68□□□□□ -1.5
SRP54-210ENST00000556380 ERC2-IT1O76042 136 aa5.68□□□□□ -1.5
SRP54-210ENST00000556380 CRYGAP11844 174 aa5.68□□□□□ -1.5
SRP54-210ENST00000556380 HINT1P49773 126 aaPredicted RBP5.68□□□□□ -1.5
SRP54-210ENST00000556380 SPATA45Q537H7 98 aa5.68□□□□□ -1.5
SRP54-210ENST00000556380 Q6ZRX8 168 aa5.68□□□□□ -1.5
SRP54-210ENST00000556380 SPRR4Q96PI1 79 aa5.68□□□□□ -1.5
SRP54-210ENST00000556380 Q9BRP9 147 aa5.68□□□□□ -1.5
SRP54-210ENST00000556380 HIGD1BQ9P298 99 aa5.68□□□□□ -1.5
SRP54-210ENST00000556380 TRAV13-2A0A0B4J235 113 aa5.67□□□□□ -1.5
SRP54-210ENST00000556380 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
SRP54-210ENST00000556380 PYY3Q5JQD4 70 aa5.67□□□□□ -1.5
SRP54-210ENST00000556380 SLC25A34Q6PIV7 304 aa5.67□□□□□ -1.5
SRP54-210ENST00000556380 OR13C6PQ8NH95 151 aa5.67□□□□□ -1.5
SRP54-210ENST00000556380 PAM16Q9Y3D7 125 aa5.67□□□□□ -1.5
SRP54-210ENST00000556380 ZNF706Q9Y5V0 76 aaPredicted RBP5.67□□□□□ -1.5
SRP54-210ENST00000556380 TRBV7-6A0A0J9YX20 115 aa5.66□□□□□ -1.5
SRP54-210ENST00000556380 LINC00483Q53H64 154 aa5.65□□□□□ -1.5
SRP54-210ENST00000556380 C14orf144Q96I85 54 aa5.65□□□□□ -1.5
SRP54-210ENST00000556380 LRP2P98164 4655 aa5.64□□□□□ -1.51
SRP54-210ENST00000556380 TAL2Q16559 108 aa5.64□□□□□ -1.51
SRP54-210ENST00000556380 KRTAP15-1Q3LI76 137 aa5.64□□□□□ -1.51
SRP54-210ENST00000556380 TYMSOSQ8TAI1 123 aa5.64□□□□□ -1.51
SRP54-210ENST00000556380 HIST1H4GQ99525 98 aa5.64□□□□□ -1.51
SRP54-210ENST00000556380 UBR4Q5T4S7 5183 aa5.64□□□□□ -1.51
SRP54-210ENST00000556380 A4D1N5 150 aa5.63□□□□□ -1.51
SRP54-210ENST00000556380 A6NDN8 102 aa5.63□□□□□ -1.51
SRP54-210ENST00000556380 C6orf99Q4VX62 202 aa5.63□□□□□ -1.51
SRP54-210ENST00000556380 C2orf91Q6ZV80 131 aa5.63□□□□□ -1.51
SRP54-210ENST00000556380 C3orf22Q8N5N4 141 aa5.63□□□□□ -1.51
SRP54-210ENST00000556380 DHRS4-AS1Q9P1J3 65 aa5.63□□□□□ -1.51
SRP54-210ENST00000556380 ELOF1P60002 83 aaKnown RBP5.62□□□□□ -1.51
SRP54-210ENST00000556380 CTAG1AP78358 180 aa5.62□□□□□ -1.51
SRP54-210ENST00000556380 A0A1B0GWB2 263 aa5.61□□□□□ -1.51
SRP54-210ENST00000556380 COX7BP24311 80 aa5.61□□□□□ -1.51
SRP54-210ENST00000556380 GAGE2AQ6NT46 116 aa5.61□□□□□ -1.51
SRP54-210ENST00000556380 SMIM11BQ8TCY0 68 aa5.61□□□□□ -1.51
SRP54-210ENST00000556380 ST20-AS1Q8NBB2 130 aa5.6□□□□□ -1.51
SRP54-210ENST00000556380 SMIM6P0DI80 62 aa5.59□□□□□ -1.51
SRP54-210ENST00000556380 VAMP3Q15836 100 aa5.59□□□□□ -1.51
SRP54-210ENST00000556380 NHP2Q9NX24 153 aaKnown RBP5.59□□□□□ -1.51
SRP54-210ENST00000556380 UQCR10Q9UDW1 63 aa5.59□□□□□ -1.51
SRP54-210ENST00000556380 A0A0B4J2C4 111 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms