RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 REG3GQ6UW15 175 aa5.79□□□□□ -1.48
ACTN1-218ENST00000556343 SCXQ7RTU7 201 aa5.79□□□□□ -1.48
ACTN1-218ENST00000556343 KRTAP7-1Q8IUC3 87 aa5.79□□□□□ -1.48
ACTN1-218ENST00000556343 DYNC1H1Q14204 4646 aaKnown RBP5.78□□□□□ -1.48
ACTN1-218ENST00000556343 TAX1BP3O14907 124 aa5.78□□□□□ -1.48
ACTN1-218ENST00000556343 SLC25A20O43772 301 aa5.77□□□□□ -1.49
ACTN1-218ENST00000556343 COX7BP24311 80 aa5.77□□□□□ -1.49
ACTN1-218ENST00000556343 C6orf99Q4VX62 202 aa5.77□□□□□ -1.49
ACTN1-218ENST00000556343 LRP1BQ9NZR2 4599 aa5.77□□□□□ -1.49
ACTN1-218ENST00000556343 H3BUT2 72 aa5.76□□□□□ -1.49
ACTN1-218ENST00000556343 INAFM2P0DMQ5 153 aa5.76□□□□□ -1.49
ACTN1-218ENST00000556343 FABP2P12104 132 aa5.76□□□□□ -1.49
ACTN1-218ENST00000556343 PKHD1P08F94 4074 aa5.76□□□□□ -1.49
ACTN1-218ENST00000556343 TRBV20-1A0A075B6N2 111 aa5.75□□□□□ -1.49
ACTN1-218ENST00000556343 TRIAP1O43715 76 aa5.75□□□□□ -1.49
ACTN1-218ENST00000556343 BCE1O60756 84 aa5.75□□□□□ -1.49
ACTN1-218ENST00000556343 UBE2AP49459 152 aa5.75□□□□□ -1.49
ACTN1-218ENST00000556343 FAM19A1Q7Z5A9 133 aa5.75□□□□□ -1.49
ACTN1-218ENST00000556343 A0A1W2PPM0 123 aa5.74□□□□□ -1.49
ACTN1-218ENST00000556343 GHRHP01286 108 aa5.74□□□□□ -1.49
ACTN1-218ENST00000556343 SPRR1AP35321 89 aa5.74□□□□□ -1.49
ACTN1-218ENST00000556343 C1orf137Q5JT78 98 aa5.74□□□□□ -1.49
ACTN1-218ENST00000556343 DHRS4-AS1Q9P1J3 65 aa5.74□□□□□ -1.49
ACTN1-218ENST00000556343 A0A1B0GX51 115 aa5.73□□□□□ -1.49
ACTN1-218ENST00000556343 B5MCH6 92 aa5.73□□□□□ -1.49
ACTN1-218ENST00000556343 H0Y9J4 135 aa5.73□□□□□ -1.49
ACTN1-218ENST00000556343 CDK2AP2O75956 126 aa5.73□□□□□ -1.49
ACTN1-218ENST00000556343 XGP55808 180 aa5.73□□□□□ -1.49
ACTN1-218ENST00000556343 ELOF1P60002 83 aaKnown RBP5.73□□□□□ -1.49
ACTN1-218ENST00000556343 ATXN8Q156A1 80 aa5.73□□□□□ -1.49
ACTN1-218ENST00000556343 PSORS1C2Q9UIG4 136 aa5.73□□□□□ -1.49
ACTN1-218ENST00000556343 DNAL4O96015 105 aa5.72□□□□□ -1.49
ACTN1-218ENST00000556343 GTF2H5Q6ZYL4 71 aa5.72□□□□□ -1.49
ACTN1-218ENST00000556343 NAA38Q9BRA0 125 aaKnown RBP5.72□□□□□ -1.49
ACTN1-218ENST00000556343 hADV29S1A0JD25 119 aa5.71□□□□□ -1.5
ACTN1-218ENST00000556343 H3BQ85 93 aa5.71□□□□□ -1.5
ACTN1-218ENST00000556343 FAM229AH3BQW9 127 aa5.71□□□□□ -1.5
ACTN1-218ENST00000556343 RPL37AP61513 92 aaKnown RBP5.71□□□□□ -1.5
ACTN1-218ENST00000556343 HAMPP81172 84 aa5.71□□□□□ -1.5
ACTN1-218ENST00000556343 LINC00575Q6W349 94 aa5.71□□□□□ -1.5
ACTN1-218ENST00000556343 Q6ZRX8 168 aa5.71□□□□□ -1.5
ACTN1-218ENST00000556343 SPCS1Q9Y6A9 102 aa5.71□□□□□ -1.5
ACTN1-218ENST00000556343 KRTAP4-16G5E9R7 235 aaPredicted RBP5.7□□□□□ -1.5
ACTN1-218ENST00000556343 OCIAD2Q56VL3 154 aa5.7□□□□□ -1.5
ACTN1-218ENST00000556343 LINC00528Q8N1L1 170 aa5.7□□□□□ -1.5
ACTN1-218ENST00000556343 LST1O00453 97 aa5.69□□□□□ -1.5
ACTN1-218ENST00000556343 ZNF861PO60384 105 aa5.69□□□□□ -1.5
ACTN1-218ENST00000556343 TRACP01848 142 aa5.69□□□□□ -1.5
ACTN1-218ENST00000556343 PLA2G1BP04054 148 aaKnown RBP5.69□□□□□ -1.5
ACTN1-218ENST00000556343 IGLV7-43P04211 117 aa5.69□□□□□ -1.5
ACTN1-218ENST00000556343 KRTAP11-1Q8IUC1 163 aa5.69□□□□□ -1.5
ACTN1-218ENST00000556343 TCL1BO95988 128 aa5.68□□□□□ -1.5
ACTN1-218ENST00000556343 SMR3BP02814 79 aaPredicted RBP5.68□□□□□ -1.5
ACTN1-218ENST00000556343 PRLHP81277 87 aa5.68□□□□□ -1.5
ACTN1-218ENST00000556343 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.68□□□□□ -1.5
ACTN1-218ENST00000556343 CLEC2BQ92478 149 aa5.68□□□□□ -1.5
ACTN1-218ENST00000556343 HIGD2AQ9BW72 106 aa5.68□□□□□ -1.5
ACTN1-218ENST00000556343 ZNF706Q9Y5V0 76 aaPredicted RBP5.68□□□□□ -1.5
ACTN1-218ENST00000556343 K7EP34 96 aa5.67□□□□□ -1.5
ACTN1-218ENST00000556343 SMCR5Q8TEV8 140 aa5.67□□□□□ -1.5
ACTN1-218ENST00000556343 APOBP04114 4563 aaKnown RBP5.66□□□□□ -1.5
ACTN1-218ENST00000556343 ORMDL1Q9P0S3 153 aa5.66□□□□□ -1.5
ACTN1-218ENST00000556343 PPDPFLQ8WWR9 84 aa5.65□□□□□ -1.5
ACTN1-218ENST00000556343 FAM218AQ96MZ4 157 aa5.65□□□□□ -1.5
ACTN1-218ENST00000556343 Q9BRP9 147 aa5.65□□□□□ -1.5
ACTN1-218ENST00000556343 VPS13BQ7Z7G8 4022 aa5.64□□□□□ -1.51
ACTN1-218ENST00000556343 H3BMG7 143 aa5.64□□□□□ -1.51
ACTN1-218ENST00000556343 TMEM256-PLSCR3K7ERE1 68 aa5.64□□□□□ -1.51
ACTN1-218ENST00000556343 SPINK6Q6UWN8 80 aa5.64□□□□□ -1.51
ACTN1-218ENST00000556343 KRTAP13-1Q8IUC0 172 aa5.64□□□□□ -1.51
ACTN1-218ENST00000556343 A0A1B0GV90 55 aa5.63□□□□□ -1.51
ACTN1-218ENST00000556343 C9JAW5 83 aa5.63□□□□□ -1.51
ACTN1-218ENST00000556343 BAALC-AS2P0C853 105 aa5.63□□□□□ -1.51
ACTN1-218ENST00000556343 UBE2V1Q13404 147 aa5.63□□□□□ -1.51
ACTN1-218ENST00000556343 Q6ZQY7 126 aa5.63□□□□□ -1.51
ACTN1-218ENST00000556343 TEX49A0A1B0GTD5 131 aa5.62□□□□□ -1.51
ACTN1-218ENST00000556343 DEFB105AQ8NG35 78 aa5.62□□□□□ -1.51
ACTN1-218ENST00000556343 F8W1H4 67 aa5.61□□□□□ -1.51
ACTN1-218ENST00000556343 H3BT86 120 aa5.61□□□□□ -1.51
ACTN1-218ENST00000556343 ERC2-IT1O76042 136 aa5.61□□□□□ -1.51
ACTN1-218ENST00000556343 Q5VSD8 79 aa5.61□□□□□ -1.51
ACTN1-218ENST00000556343 GAGE2AQ6NT46 116 aa5.61□□□□□ -1.51
ACTN1-218ENST00000556343 LAMTOR3Q9UHA4 124 aa5.61□□□□□ -1.51
ACTN1-218ENST00000556343 Q8N1X5 172 aa5.6□□□□□ -1.51
ACTN1-218ENST00000556343 ANKRD29Q8N6D5 301 aa5.6□□□□□ -1.51
ACTN1-218ENST00000556343 IGLV5-48A0A075B6I7 105 aa5.59□□□□□ -1.51
ACTN1-218ENST00000556343 F8WEM9 126 aa5.59□□□□□ -1.51
ACTN1-218ENST00000556343 ST20-AS1Q8NBB2 130 aa5.59□□□□□ -1.51
ACTN1-218ENST00000556343 SPRR4Q96PI1 79 aa5.59□□□□□ -1.51
ACTN1-218ENST00000556343 SPRR1BP22528 89 aa5.58□□□□□ -1.52
ACTN1-218ENST00000556343 Q8N377 158 aa5.58□□□□□ -1.52
ACTN1-218ENST00000556343 RYR1P21817 5038 aa5.58□□□□□ -1.52
ACTN1-218ENST00000556343 HSPG2P98160 4391 aa5.57□□□□□ -1.52
ACTN1-218ENST00000556343 JMJD7-PLA2G4BH0Y9G9 81 aa5.57□□□□□ -1.52
ACTN1-218ENST00000556343 EPPK1P58107 5090 aaKnown RBP5.57□□□□□ -1.52
ACTN1-218ENST00000556343 NDUFV3P56181 108 aaKnown RBP5.56□□□□□ -1.52
ACTN1-218ENST00000556343 C21orf62-AS1Q17RA5 79 aa5.56□□□□□ -1.52
ACTN1-218ENST00000556343 FAM229BQ4G0N7 80 aa5.56□□□□□ -1.52
ACTN1-218ENST00000556343 LINC00483Q53H64 154 aa5.56□□□□□ -1.52
ACTN1-218ENST00000556343 FAT1Q14517 4588 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 237 ms