RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 C1orf137Q5JT78 98 aa7.69□□□□□ -1.18
SHMT2-221ENST00000555773 PRO1854Q9UHT4 67 aa7.69□□□□□ -1.18
SHMT2-221ENST00000555773 A0A1B0GWB2 263 aa7.68□□□□□ -1.18
SHMT2-221ENST00000555773 HINT1P49773 126 aaPredicted RBP7.68□□□□□ -1.18
SHMT2-221ENST00000555773 KRTAP17-1Q9BYP8 105 aa7.68□□□□□ -1.18
SHMT2-221ENST00000555773 HERC2O95714 4834 aa7.67□□□□□ -1.18
SHMT2-221ENST00000555773 ZNF73O43830 326 aaPredicted RBP7.67□□□□□ -1.18
SHMT2-221ENST00000555773 NHP2Q9NX24 153 aaKnown RBP7.67□□□□□ -1.18
SHMT2-221ENST00000555773 VPS13BQ7Z7G8 4022 aa7.66□□□□□ -1.18
SHMT2-221ENST00000555773 ETDCA0A1B0GVM5 59 aa7.66□□□□□ -1.18
SHMT2-221ENST00000555773 IGLV7-43P04211 117 aa7.66□□□□□ -1.18
SHMT2-221ENST00000555773 RPL13AP40429 203 aaKnown RBP7.66□□□□□ -1.18
SHMT2-221ENST00000555773 Q5VSD8 79 aa7.66□□□□□ -1.18
SHMT2-221ENST00000555773 TRBV7-6A0A0J9YX20 115 aa7.65□□□□□ -1.18
SHMT2-221ENST00000555773 KRTAP4-16G5E9R7 235 aaPredicted RBP7.65□□□□□ -1.18
SHMT2-221ENST00000555773 H0Y9J4 135 aa7.65□□□□□ -1.18
SHMT2-221ENST00000555773 RPL28P46779 137 aaKnown RBP7.65□□□□□ -1.18
SHMT2-221ENST00000555773 KRTAP10-4P60372 401 aaPredicted RBP7.65□□□□□ -1.18
SHMT2-221ENST00000555773 FAM19A1Q7Z5A9 133 aa7.65□□□□□ -1.18
SHMT2-221ENST00000555773 SMIM11BQ8TCY0 68 aa7.65□□□□□ -1.18
SHMT2-221ENST00000555773 DIRC1Q969H9 104 aa7.65□□□□□ -1.18
SHMT2-221ENST00000555773 ZNF861PO60384 105 aa7.64□□□□□ -1.19
SHMT2-221ENST00000555773 UBE2AP49459 152 aa7.64□□□□□ -1.19
SHMT2-221ENST00000555773 VAMP3Q15836 100 aa7.64□□□□□ -1.19
SHMT2-221ENST00000555773 B5MCH6 92 aa7.63□□□□□ -1.19
SHMT2-221ENST00000555773 C6orf99Q4VX62 202 aa7.63□□□□□ -1.19
SHMT2-221ENST00000555773 H7C2G1 150 aa7.62□□□□□ -1.19
SHMT2-221ENST00000555773 KRTAP13-1Q8IUC0 172 aa7.62□□□□□ -1.19
SHMT2-221ENST00000555773 K7ERJ3 54 aa7.61□□□□□ -1.19
SHMT2-221ENST00000555773 INAFM2P0DMQ5 153 aa7.61□□□□□ -1.19
SHMT2-221ENST00000555773 COX7BP24311 80 aa7.61□□□□□ -1.19
SHMT2-221ENST00000555773 Q1RN00 199 aa7.61□□□□□ -1.19
SHMT2-221ENST00000555773 SPINK6Q6UWN8 80 aa7.61□□□□□ -1.19
SHMT2-221ENST00000555773 Q6ZRX8 168 aa7.61□□□□□ -1.19
SHMT2-221ENST00000555773 ELOF1P60002 83 aaKnown RBP7.6□□□□□ -1.19
SHMT2-221ENST00000555773 PRLHP81277 87 aa7.6□□□□□ -1.19
SHMT2-221ENST00000555773 BATFQ16520 125 aa7.6□□□□□ -1.19
SHMT2-221ENST00000555773 DHRS4-AS1Q9P1J3 65 aa7.59□□□□□ -1.19
SHMT2-221ENST00000555773 SRRM2Q9UQ35 2752 aaKnown RBP7.58□□□□□ -1.2
SHMT2-221ENST00000555773 H0YGX0 51 aa7.58□□□□□ -1.2
SHMT2-221ENST00000555773 TSPAN13O95857 204 aa7.57□□□□□ -1.2
SHMT2-221ENST00000555773 COX6CP09669 75 aa7.57□□□□□ -1.2
SHMT2-221ENST00000555773 HIGD2AQ9BW72 106 aa7.57□□□□□ -1.2
SHMT2-221ENST00000555773 SNHG12Q9BXW3 62 aa7.57□□□□□ -1.2
SHMT2-221ENST00000555773 PSMB2P49721 201 aa7.56□□□□□ -1.2
SHMT2-221ENST00000555773 SMCR5Q8TEV8 140 aa7.56□□□□□ -1.2
SHMT2-221ENST00000555773 Q9BRP9 147 aa7.56□□□□□ -1.2
SHMT2-221ENST00000555773 SLC25A20O43772 301 aa7.55□□□□□ -1.2
SHMT2-221ENST00000555773 SNCGO76070 127 aa7.55□□□□□ -1.2
SHMT2-221ENST00000555773 TRIAP1O43715 76 aa7.54□□□□□ -1.2
SHMT2-221ENST00000555773 LINC00575Q6W349 94 aa7.54□□□□□ -1.2
SHMT2-221ENST00000555773 COL5A1-AS1Q5SY13 56 aa7.53□□□□□ -1.2
SHMT2-221ENST00000555773 KRTAP4-5Q9BYR2 181 aa7.53□□□□□ -1.2
SHMT2-221ENST00000555773 ZNF706Q9Y5V0 76 aaPredicted RBP7.53□□□□□ -1.2
SHMT2-221ENST00000555773 A0A1B0GX51 115 aa7.52□□□□□ -1.21
SHMT2-221ENST00000555773 hADV29S1A0JD25 119 aa7.52□□□□□ -1.21
SHMT2-221ENST00000555773 ERC2-IT1O76042 136 aa7.52□□□□□ -1.21
SHMT2-221ENST00000555773 SCGB1C2P0DMR2 95 aa7.52□□□□□ -1.21
SHMT2-221ENST00000555773 C9orf118A6NHY6 69 aa7.5□□□□□ -1.21
SHMT2-221ENST00000555773 TAX1BP3O14907 124 aa7.5□□□□□ -1.21
SHMT2-221ENST00000555773 ABCA13Q86UQ4 5058 aa7.49□□□□□ -1.21
SHMT2-221ENST00000555773 LYRM7Q5U5X0 104 aa7.49□□□□□ -1.21
SHMT2-221ENST00000555773 SPRR4Q96PI1 79 aa7.49□□□□□ -1.21
SHMT2-221ENST00000555773 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.48□□□□□ -1.21
SHMT2-221ENST00000555773 H3BUT2 72 aa7.47□□□□□ -1.21
SHMT2-221ENST00000555773 ST20-AS1Q8NBB2 130 aa7.47□□□□□ -1.21
SHMT2-221ENST00000555773 FAM218AQ96MZ4 157 aa7.47□□□□□ -1.21
SHMT2-221ENST00000555773 GHRHP01286 108 aa7.46□□□□□ -1.22
SHMT2-221ENST00000555773 KRTAP1-4P0C5Y4 121 aa7.46□□□□□ -1.22
SHMT2-221ENST00000555773 FAM229BQ4G0N7 80 aa7.46□□□□□ -1.22
SHMT2-221ENST00000555773 LINC00483Q53H64 154 aa7.46□□□□□ -1.22
SHMT2-221ENST00000555773 OCIAD2Q56VL3 154 aa7.46□□□□□ -1.22
SHMT2-221ENST00000555773 GAGE2AQ6NT46 116 aa7.46□□□□□ -1.22
SHMT2-221ENST00000555773 CLEC2BQ92478 149 aa7.46□□□□□ -1.22
SHMT2-221ENST00000555773 NAA38Q9BRA0 125 aaKnown RBP7.46□□□□□ -1.22
SHMT2-221ENST00000555773 PKHD1L1Q86WI1 4243 aa7.45□□□□□ -1.22
SHMT2-221ENST00000555773 FLG2Q5D862 2391 aaPredicted RBP7.45□□□□□ -1.22
SHMT2-221ENST00000555773 IGLV5-48A0A075B6I7 105 aa7.45□□□□□ -1.22
SHMT2-221ENST00000555773 TRBV20-1A0A075B6N2 111 aa7.45□□□□□ -1.22
SHMT2-221ENST00000555773 TEX49A0A1B0GTD5 131 aa7.45□□□□□ -1.22
SHMT2-221ENST00000555773 SPRR1BP22528 89 aa7.45□□□□□ -1.22
SHMT2-221ENST00000555773 Q6ZQY7 126 aa7.45□□□□□ -1.22
SHMT2-221ENST00000555773 A0A1W2PPM0 123 aa7.44□□□□□ -1.22
SHMT2-221ENST00000555773 LST1O00453 97 aa7.44□□□□□ -1.22
SHMT2-221ENST00000555773 OXTP01178 125 aa7.44□□□□□ -1.22
SHMT2-221ENST00000555773 TRACP01848 142 aa7.44□□□□□ -1.22
SHMT2-221ENST00000555773 CRYGAP11844 174 aa7.44□□□□□ -1.22
SHMT2-221ENST00000555773 LINC01600Q96MT4 127 aa7.44□□□□□ -1.22
SHMT2-221ENST00000555773 H3BQ85 93 aa7.43□□□□□ -1.22
SHMT2-221ENST00000555773 DNAL4O96015 105 aa7.43□□□□□ -1.22
SHMT2-221ENST00000555773 FABP2P12104 132 aa7.43□□□□□ -1.22
SHMT2-221ENST00000555773 LINC01547P58512 204 aaPredicted RBP7.43□□□□□ -1.22
SHMT2-221ENST00000555773 ATXN8Q156A1 80 aa7.43□□□□□ -1.22
SHMT2-221ENST00000555773 DEFB105AQ8NG35 78 aa7.43□□□□□ -1.22
SHMT2-221ENST00000555773 PPDPFLQ8WWR9 84 aa7.43□□□□□ -1.22
SHMT2-221ENST00000555773 ANAPC11Q9NYG5 84 aa7.42□□□□□ -1.22
SHMT2-221ENST00000555773 TCL1BO95988 128 aa7.41□□□□□ -1.22
SHMT2-221ENST00000555773 Q8N377 158 aa7.41□□□□□ -1.22
SHMT2-221ENST00000555773 LAMTOR3Q9UHA4 124 aa7.41□□□□□ -1.22
SHMT2-221ENST00000555773 KRTAP29-1A8MX34 341 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms