RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 LINC00308Q8TCZ7 52 aa7.99□□□□□ -1.13
SNX6-203ENST00000555416 SMCR5Q8TEV8 140 aa7.99□□□□□ -1.13
SNX6-203ENST00000555416 SPRR4Q96PI1 79 aa7.99□□□□□ -1.13
SNX6-203ENST00000555416 ETDCA0A1B0GVM5 59 aa7.98□□□□□ -1.13
SNX6-203ENST00000555416 B5MCH6 92 aa7.98□□□□□ -1.13
SNX6-203ENST00000555416 TIMM17BO60830 172 aa7.98□□□□□ -1.13
SNX6-203ENST00000555416 C3orf22Q8N5N4 141 aa7.98□□□□□ -1.13
SNX6-203ENST00000555416 HIST1H2BLQ99880 126 aa7.98□□□□□ -1.13
SNX6-203ENST00000555416 ERC2-IT1O76042 136 aa7.97□□□□□ -1.13
SNX6-203ENST00000555416 LPAP08519 4548 aa7.97□□□□□ -1.13
SNX6-203ENST00000555416 C20orf202A1L168 122 aa7.96□□□□□ -1.14
SNX6-203ENST00000555416 PCP2Q8IVA1 136 aa7.96□□□□□ -1.14
SNX6-203ENST00000555416 Q9BRP9 147 aa7.96□□□□□ -1.14
SNX6-203ENST00000555416 S100A7L2Q5SY68 101 aa7.95□□□□□ -1.14
SNX6-203ENST00000555416 PPDPFQ9H3Y8 114 aa7.95□□□□□ -1.14
SNX6-203ENST00000555416 TRAV23DV6A0A075B6W5 121 aa7.93□□□□□ -1.14
SNX6-203ENST00000555416 Q6ZRX8 168 aa7.93□□□□□ -1.14
SNX6-203ENST00000555416 SPANXCQ9NY87 97 aa7.93□□□□□ -1.14
SNX6-203ENST00000555416 PRR4Q16378 134 aa7.92□□□□□ -1.14
SNX6-203ENST00000555416 LINC00304Q8N9R0 145 aa7.92□□□□□ -1.14
SNX6-203ENST00000555416 ZNF73O43830 326 aaPredicted RBP7.91□□□□□ -1.14
SNX6-203ENST00000555416 S100A2P29034 98 aa7.91□□□□□ -1.14
SNX6-203ENST00000555416 SNRPEP62304 92 aaKnown RBP7.91□□□□□ -1.14
SNX6-203ENST00000555416 SCGB1D4Q6XE38 83 aa7.91□□□□□ -1.14
SNX6-203ENST00000555416 SPANXDQ9BXN6 97 aa7.91□□□□□ -1.14
SNX6-203ENST00000555416 S100A12P80511 92 aa7.9□□□□□ -1.14
SNX6-203ENST00000555416 LINC00483Q53H64 154 aa7.9□□□□□ -1.14
SNX6-203ENST00000555416 GAGE2AQ6NT46 116 aa7.9□□□□□ -1.14
SNX6-203ENST00000555416 OR13C6PQ8NH95 151 aa7.9□□□□□ -1.14
SNX6-203ENST00000555416 ZNF706Q9Y5V0 76 aaPredicted RBP7.9□□□□□ -1.14
SNX6-203ENST00000555416 S100A6P06703 90 aa7.89□□□□□ -1.15
SNX6-203ENST00000555416 RETNLBQ9BQ08 111 aa7.89□□□□□ -1.15
SNX6-203ENST00000555416 RNF213Q63HN8 5207 aa7.87□□□□□ -1.15
SNX6-203ENST00000555416 C5orf52A6NGY3 159 aa7.87□□□□□ -1.15
SNX6-203ENST00000555416 MUSTN1Q8IVN3 82 aa7.87□□□□□ -1.15
SNX6-203ENST00000555416 ST20-AS1Q8NBB2 130 aa7.87□□□□□ -1.15
SNX6-203ENST00000555416 AKR1D1P51857 326 aa7.86□□□□□ -1.15
SNX6-203ENST00000555416 Q8NBF4 154 aa7.86□□□□□ -1.15
SNX6-203ENST00000555416 IFITM1P13164 125 aa7.84□□□□□ -1.15
SNX6-203ENST00000555416 JOSD1Q15040 202 aaPredicted RBP7.84□□□□□ -1.15
SNX6-203ENST00000555416 LINC00518Q8N0U6 118 aa7.84□□□□□ -1.15
SNX6-203ENST00000555416 IGLV9-49A0A0B4J1Y8 123 aa7.83□□□□□ -1.16
SNX6-203ENST00000555416 MOBPQ13875 183 aa7.83□□□□□ -1.16
SNX6-203ENST00000555416 C6orf99Q4VX62 202 aa7.83□□□□□ -1.16
SNX6-203ENST00000555416 SCGB1D1O95968 90 aa7.82□□□□□ -1.16
SNX6-203ENST00000555416 Q6ZVH6 145 aa7.82□□□□□ -1.16
SNX6-203ENST00000555416 ELOF1P60002 83 aaKnown RBP7.81□□□□□ -1.16
SNX6-203ENST00000555416 CBY1Q9Y3M2 126 aa7.81□□□□□ -1.16
SNX6-203ENST00000555416 HSBP1L1C9JCN9 74 aa7.8□□□□□ -1.16
SNX6-203ENST00000555416 COX7BP24311 80 aa7.8□□□□□ -1.16
SNX6-203ENST00000555416 HINT1P49773 126 aaPredicted RBP7.8□□□□□ -1.16
SNX6-203ENST00000555416 A6NDN8 102 aa7.79□□□□□ -1.16
SNX6-203ENST00000555416 SPAG11AQ6PDA7 123 aa7.79□□□□□ -1.16
SNX6-203ENST00000555416 CTAG1AP78358 180 aa7.78□□□□□ -1.16
SNX6-203ENST00000555416 COPS9Q8WXC6 57 aa7.78□□□□□ -1.16
SNX6-203ENST00000555416 DHRS4-AS1Q9P1J3 65 aa7.77□□□□□ -1.17
SNX6-203ENST00000555416 IGLV7-46A0A075B6I9 117 aa7.76□□□□□ -1.17
SNX6-203ENST00000555416 A4D1N5 150 aa7.76□□□□□ -1.17
SNX6-203ENST00000555416 SPRR1BP22528 89 aa7.76□□□□□ -1.17
SNX6-203ENST00000555416 SSBP3-AS1Q7Z2R9 100 aa7.76□□□□□ -1.17
SNX6-203ENST00000555416 SMIM11BQ8TCY0 68 aa7.76□□□□□ -1.17
SNX6-203ENST00000555416 TRBV7-6A0A0J9YX20 115 aa7.75□□□□□ -1.17
SNX6-203ENST00000555416 GHRHP01286 108 aa7.75□□□□□ -1.17
SNX6-203ENST00000555416 COX8AP10176 69 aa7.75□□□□□ -1.17
SNX6-203ENST00000555416 C9orf153Q5TBE3 101 aa7.75□□□□□ -1.17
SNX6-203ENST00000555416 SPINK1P00995 79 aa7.74□□□□□ -1.17
SNX6-203ENST00000555416 TRAV13-2A0A0B4J235 113 aa7.73□□□□□ -1.17
SNX6-203ENST00000555416 A0A1B0GWB2 263 aa7.73□□□□□ -1.17
SNX6-203ENST00000555416 LINC01547P58512 204 aaPredicted RBP7.73□□□□□ -1.17
SNX6-203ENST00000555416 DEFB105AQ8NG35 78 aa7.73□□□□□ -1.17
SNX6-203ENST00000555416 C14orf144Q96I85 54 aa7.73□□□□□ -1.17
SNX6-203ENST00000555416 C12orf57Q99622 126 aa7.72□□□□□ -1.17
SNX6-203ENST00000555416 PAM16Q9Y3D7 125 aa7.72□□□□□ -1.17
SNX6-203ENST00000555416 TPRXLQ17RH7 258 aa7.71□□□□□ -1.18
SNX6-203ENST00000555416 Q1RN00 199 aa7.71□□□□□ -1.18
SNX6-203ENST00000555416 SMIM29Q86T20 159 aa7.71□□□□□ -1.18
SNX6-203ENST00000555416 Q8N377 158 aa7.71□□□□□ -1.18
SNX6-203ENST00000555416 DLEU1O43261 78 aa7.7□□□□□ -1.18
SNX6-203ENST00000555416 TAL2Q16559 108 aa7.7□□□□□ -1.18
SNX6-203ENST00000555416 SPATA45Q537H7 98 aa7.7□□□□□ -1.18
SNX6-203ENST00000555416 HIST1H4GQ99525 98 aa7.7□□□□□ -1.18
SNX6-203ENST00000555416 IGLV5-48A0A075B6I7 105 aa7.68□□□□□ -1.18
SNX6-203ENST00000555416 TEX49A0A1B0GTD5 131 aa7.68□□□□□ -1.18
SNX6-203ENST00000555416 RPS29P62273 56 aaKnown RBP7.68□□□□□ -1.18
SNX6-203ENST00000555416 C2orf91Q6ZV80 131 aa7.68□□□□□ -1.18
SNX6-203ENST00000555416 FP248Q71RG6 208 aaPredicted RBP7.68□□□□□ -1.18
SNX6-203ENST00000555416 LAMTOR3Q9UHA4 124 aa7.68□□□□□ -1.18
SNX6-203ENST00000555416 A0A0G2JQZ4 141 aa7.67□□□□□ -1.18
SNX6-203ENST00000555416 XP32Q5T750 250 aa7.67□□□□□ -1.18
SNX6-203ENST00000555416 HRCT1Q6UXD1 115 aa7.67□□□□□ -1.18
SNX6-203ENST00000555416 VAMP8Q9BV40 100 aa7.67□□□□□ -1.18
SNX6-203ENST00000555416 KRTAP13-3Q3SY46 172 aa7.66□□□□□ -1.18
SNX6-203ENST00000555416 SLC25A34Q6PIV7 304 aa7.66□□□□□ -1.18
SNX6-203ENST00000555416 LINC00575Q6W349 94 aa7.66□□□□□ -1.18
SNX6-203ENST00000555416 CDIP1Q9H305 208 aa7.66□□□□□ -1.18
SNX6-203ENST00000555416 MUC2Q02817 5179 aa7.65□□□□□ -1.18
SNX6-203ENST00000555416 PYY3Q5JQD4 70 aa7.65□□□□□ -1.18
SNX6-203ENST00000555416 TMA7Q9Y2S6 64 aaKnown RBP7.65□□□□□ -1.18
SNX6-203ENST00000555416 SLC25A20O43772 301 aa7.64□□□□□ -1.19
SNX6-203ENST00000555416 CFC1BP0CG36 223 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms