RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 CFC1BP0CG36 223 aa8.6□□□□□ -1.03
SPTLC2-202ENST00000554365 CFC1P0CG37 223 aa8.6□□□□□ -1.03
SPTLC2-202ENST00000554365 A0A1B0GWB2 263 aa8.59□□□□□ -1.03
SPTLC2-202ENST00000554365 MRPL55Q7Z7F7 128 aaKnown RBP8.59□□□□□ -1.03
SPTLC2-202ENST00000554365 KRTAP11-1Q8IUC1 163 aa8.59□□□□□ -1.03
SPTLC2-202ENST00000554365 NKAPP1Q8N9T2 125 aa8.59□□□□□ -1.03
SPTLC2-202ENST00000554365 LINC00167Q96N53 147 aa8.59□□□□□ -1.03
SPTLC2-202ENST00000554365 GAGE10A6NGK3 116 aa8.58□□□□□ -1.04
SPTLC2-202ENST00000554365 M0R143 59 aa8.58□□□□□ -1.04
SPTLC2-202ENST00000554365 A0A0B4J2C4 111 aa8.57□□□□□ -1.04
SPTLC2-202ENST00000554365 TMEM238LA0A1B0GVL6 79 aa8.57□□□□□ -1.04
SPTLC2-202ENST00000554365 A6NJY4 79 aa8.57□□□□□ -1.04
SPTLC2-202ENST00000554365 IGLV6-57P01721 117 aa8.57□□□□□ -1.04
SPTLC2-202ENST00000554365 TRBV10-3A0A0K0K1G6 114 aa8.56□□□□□ -1.04
SPTLC2-202ENST00000554365 K7ERJ3 54 aa8.56□□□□□ -1.04
SPTLC2-202ENST00000554365 NHP2Q9NX24 153 aaKnown RBP8.56□□□□□ -1.04
SPTLC2-202ENST00000554365 IGLV1-50A0A075B6I6 118 aa8.55□□□□□ -1.04
SPTLC2-202ENST00000554365 LBHQ53QV2 105 aaPredicted RBP8.55□□□□□ -1.04
SPTLC2-202ENST00000554365 SNHG12Q9BXW3 62 aa8.55□□□□□ -1.04
SPTLC2-202ENST00000554365 TRAV13-2A0A0B4J235 113 aa8.54□□□□□ -1.04
SPTLC2-202ENST00000554365 RPL37AP8A6NKH3 93 aa8.54□□□□□ -1.04
SPTLC2-202ENST00000554365 RPL13AP40429 203 aaKnown RBP8.53□□□□□ -1.04
SPTLC2-202ENST00000554365 OR13C6PQ8NH95 151 aa8.53□□□□□ -1.04
SPTLC2-202ENST00000554365 LPAP08519 4548 aa8.53□□□□□ -1.04
SPTLC2-202ENST00000554365 A6NDN8 102 aa8.52□□□□□ -1.05
SPTLC2-202ENST00000554365 BATFQ16520 125 aa8.52□□□□□ -1.05
SPTLC2-202ENST00000554365 S100A7L2Q5SY68 101 aa8.52□□□□□ -1.05
SPTLC2-202ENST00000554365 RAB37Q96AX2 223 aa8.52□□□□□ -1.05
SPTLC2-202ENST00000554365 TMEM126AQ9H061 195 aa8.52□□□□□ -1.05
SPTLC2-202ENST00000554365 KCNQ1DNQ9H478 68 aa8.52□□□□□ -1.05
SPTLC2-202ENST00000554365 PRO1854Q9UHT4 67 aa8.52□□□□□ -1.05
SPTLC2-202ENST00000554365 PSORS1C2Q9UIG4 136 aa8.51□□□□□ -1.05
SPTLC2-202ENST00000554365 SPRR1AP35321 89 aa8.5□□□□□ -1.05
SPTLC2-202ENST00000554365 UBE2BP63146 152 aa8.5□□□□□ -1.05
SPTLC2-202ENST00000554365 TRAV23DV6A0A075B6W5 121 aa8.49□□□□□ -1.05
SPTLC2-202ENST00000554365 PRYO14603 147 aa8.49□□□□□ -1.05
SPTLC2-202ENST00000554365 C1orf137Q5JT78 98 aa8.49□□□□□ -1.05
SPTLC2-202ENST00000554365 SMIM11BQ8TCY0 68 aa8.49□□□□□ -1.05
SPTLC2-202ENST00000554365 KRTAP4-16G5E9R7 235 aaPredicted RBP8.48□□□□□ -1.05
SPTLC2-202ENST00000554365 TSPAN13O95857 204 aa8.48□□□□□ -1.05
SPTLC2-202ENST00000554365 H7C2G1 150 aa8.47□□□□□ -1.05
SPTLC2-202ENST00000554365 ZNF73O43830 326 aaPredicted RBP8.46□□□□□ -1.06
SPTLC2-202ENST00000554365 RPL28P46779 137 aaKnown RBP8.46□□□□□ -1.06
SPTLC2-202ENST00000554365 PRR26Q8N8Z3 221 aa8.46□□□□□ -1.06
SPTLC2-202ENST00000554365 TAX1BP3O14907 124 aa8.45□□□□□ -1.06
SPTLC2-202ENST00000554365 C6orf99Q4VX62 202 aa8.44□□□□□ -1.06
SPTLC2-202ENST00000554365 CBY1Q9Y3M2 126 aa8.44□□□□□ -1.06
SPTLC2-202ENST00000554365 TRIAP1O43715 76 aa8.43□□□□□ -1.06
SPTLC2-202ENST00000554365 BCE1O60756 84 aa8.43□□□□□ -1.06
SPTLC2-202ENST00000554365 IGLV7-43P04211 117 aa8.43□□□□□ -1.06
SPTLC2-202ENST00000554365 KRTAP13-1Q8IUC0 172 aa8.43□□□□□ -1.06
SPTLC2-202ENST00000554365 DIRC1Q969H9 104 aa8.43□□□□□ -1.06
SPTLC2-202ENST00000554365 B5MCH6 92 aa8.42□□□□□ -1.06
SPTLC2-202ENST00000554365 Q1RN00 199 aa8.42□□□□□ -1.06
SPTLC2-202ENST00000554365 NAA38Q9BRA0 125 aaKnown RBP8.42□□□□□ -1.06
SPTLC2-202ENST00000554365 TRBV7-6A0A0J9YX20 115 aa8.41□□□□□ -1.06
SPTLC2-202ENST00000554365 COL5A1-AS1Q5SY13 56 aa8.41□□□□□ -1.06
SPTLC2-202ENST00000554365 H0Y9J4 135 aa8.4□□□□□ -1.06
SPTLC2-202ENST00000554365 ELOF1P60002 83 aaKnown RBP8.4□□□□□ -1.06
SPTLC2-202ENST00000554365 FAM19A1Q7Z5A9 133 aa8.4□□□□□ -1.06
SPTLC2-202ENST00000554365 ETDCA0A1B0GVM5 59 aa8.39□□□□□ -1.07
SPTLC2-202ENST00000554365 C9orf118A6NHY6 69 aa8.39□□□□□ -1.07
SPTLC2-202ENST00000554365 COX7BP24311 80 aa8.39□□□□□ -1.07
SPTLC2-202ENST00000554365 PRLHP81277 87 aa8.39□□□□□ -1.07
SPTLC2-202ENST00000554365 Q6ZRX8 168 aa8.39□□□□□ -1.07
SPTLC2-202ENST00000554365 Q9BRP9 147 aa8.38□□□□□ -1.07
SPTLC2-202ENST00000554365 PSMB2P49721 201 aa8.37□□□□□ -1.07
SPTLC2-202ENST00000554365 PRR4Q16378 134 aa8.37□□□□□ -1.07
SPTLC2-202ENST00000554365 SMCR5Q8TEV8 140 aa8.37□□□□□ -1.07
SPTLC2-202ENST00000554365 H3BUT2 72 aa8.36□□□□□ -1.07
SPTLC2-202ENST00000554365 FAM218AQ96MZ4 157 aa8.36□□□□□ -1.07
SPTLC2-202ENST00000554365 MUC2Q02817 5179 aa8.36□□□□□ -1.07
SPTLC2-202ENST00000554365 ZNF861PO60384 105 aa8.35□□□□□ -1.07
SPTLC2-202ENST00000554365 ERC2-IT1O76042 136 aa8.35□□□□□ -1.07
SPTLC2-202ENST00000554365 UBE2AP49459 152 aa8.35□□□□□ -1.07
SPTLC2-202ENST00000554365 LINC00575Q6W349 94 aa8.35□□□□□ -1.07
SPTLC2-202ENST00000554365 H0YGX0 51 aa8.34□□□□□ -1.07
SPTLC2-202ENST00000554365 KRTAP1-4P0C5Y4 121 aa8.34□□□□□ -1.07
SPTLC2-202ENST00000554365 VAMP3Q15836 100 aa8.34□□□□□ -1.07
SPTLC2-202ENST00000554365 CLEC2BQ92478 149 aa8.34□□□□□ -1.07
SPTLC2-202ENST00000554365 A0A1W2PPM0 123 aa8.33□□□□□ -1.08
SPTLC2-202ENST00000554365 COX6CP09669 75 aa8.32□□□□□ -1.08
SPTLC2-202ENST00000554365 HIGD2AQ9BW72 106 aa8.31□□□□□ -1.08
SPTLC2-202ENST00000554365 DHRS4-AS1Q9P1J3 65 aa8.31□□□□□ -1.08
SPTLC2-202ENST00000554365 TCL1BO95988 128 aa8.3□□□□□ -1.08
SPTLC2-202ENST00000554365 SCGB1C2P0DMR2 95 aa8.3□□□□□ -1.08
SPTLC2-202ENST00000554365 hADV29S1A0JD25 119 aa8.29□□□□□ -1.08
SPTLC2-202ENST00000554365 LST1O00453 97 aa8.29□□□□□ -1.08
SPTLC2-202ENST00000554365 A0A0U1RQV1 116 aa8.28□□□□□ -1.08
SPTLC2-202ENST00000554365 A0A1B0GX51 115 aa8.28□□□□□ -1.08
SPTLC2-202ENST00000554365 ST20-AS1Q8NBB2 130 aa8.28□□□□□ -1.08
SPTLC2-202ENST00000554365 FABP2P12104 132 aa8.27□□□□□ -1.09
SPTLC2-202ENST00000554365 LINC01547P58512 204 aaPredicted RBP8.27□□□□□ -1.09
SPTLC2-202ENST00000554365 SLC25A20O43772 301 aa8.26□□□□□ -1.09
SPTLC2-202ENST00000554365 LYRM7Q5U5X0 104 aa8.26□□□□□ -1.09
SPTLC2-202ENST00000554365 TRACP01848 142 aa8.25□□□□□ -1.09
SPTLC2-202ENST00000554365 Q6ZQY7 126 aa8.25□□□□□ -1.09
SPTLC2-202ENST00000554365 KRTAP9-2Q9BYQ4 174 aa8.25□□□□□ -1.09
SPTLC2-202ENST00000554365 TRBV20-1A0A075B6N2 111 aa8.24□□□□□ -1.09
SPTLC2-202ENST00000554365 ATXN8Q156A1 80 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms