RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 S100A7L2Q5SY68 101 aa4.5□□□□□ -1.69
ACTN1-212ENST00000554158 COMMD7Q86VX2 200 aa4.5□□□□□ -1.69
ACTN1-212ENST00000554158 MYMXA0A1B0GTQ4 84 aa4.49□□□□□ -1.69
ACTN1-212ENST00000554158 HINT1P49773 126 aaPredicted RBP4.49□□□□□ -1.69
ACTN1-212ENST00000554158 PMCHL1Q16048 86 aa4.49□□□□□ -1.69
ACTN1-212ENST00000554158 PCOTHQ58A44 107 aa4.49□□□□□ -1.69
ACTN1-212ENST00000554158 COX6B2Q6YFQ2 88 aa4.49□□□□□ -1.69
ACTN1-212ENST00000554158 TMEM223A0PJW6 202 aa4.48□□□□□ -1.69
ACTN1-212ENST00000554158 C9orf92A6NGG3 77 aa4.48□□□□□ -1.69
ACTN1-212ENST00000554158 PCP4L1A6NKN8 68 aa4.48□□□□□ -1.69
ACTN1-212ENST00000554158 KRTAP4-16G5E9R7 235 aaPredicted RBP4.48□□□□□ -1.69
ACTN1-212ENST00000554158 SNAPINO95295 136 aa4.48□□□□□ -1.69
ACTN1-212ENST00000554158 SLC25A34Q6PIV7 304 aa4.48□□□□□ -1.69
ACTN1-212ENST00000554158 Q6ZRX8 168 aa4.48□□□□□ -1.69
ACTN1-212ENST00000554158 CBY1Q9Y3M2 126 aa4.48□□□□□ -1.69
ACTN1-212ENST00000554158 TRAPPC1Q9Y5R8 145 aa4.48□□□□□ -1.69
ACTN1-212ENST00000554158 LOC100996750A0A140TA64 210 aa4.47□□□□□ -1.69
ACTN1-212ENST00000554158 ERC2-IT1O76042 136 aa4.47□□□□□ -1.69
ACTN1-212ENST00000554158 MT1HP80294 61 aa4.47□□□□□ -1.69
ACTN1-212ENST00000554158 KRTAP4-6Q9BYQ5 205 aa4.47□□□□□ -1.69
ACTN1-212ENST00000554158 A0A096LNJ9 63 aa4.46□□□□□ -1.7
ACTN1-212ENST00000554158 TRBV10-2A0A0K0K1G8 114 aa4.46□□□□□ -1.7
ACTN1-212ENST00000554158 UQCC3Q6UW78 93 aa4.46□□□□□ -1.7
ACTN1-212ENST00000554158 HRCT1Q6UXD1 115 aa4.46□□□□□ -1.7
ACTN1-212ENST00000554158 C18orf32Q8TCD1 76 aa4.46□□□□□ -1.7
ACTN1-212ENST00000554158 IFI27L1Q96BM0 104 aa4.46□□□□□ -1.7
ACTN1-212ENST00000554158 SPANXB1Q9NS25 103 aaPredicted RBP4.46□□□□□ -1.7
ACTN1-212ENST00000554158 TRAV23DV6A0A075B6W5 121 aa4.45□□□□□ -1.7
ACTN1-212ENST00000554158 TRAV12-1A0A0B4J245 112 aa4.45□□□□□ -1.7
ACTN1-212ENST00000554158 CLLU1Q5K131 121 aa4.45□□□□□ -1.7
ACTN1-212ENST00000554158 Q9BRP9 147 aa4.45□□□□□ -1.7
ACTN1-212ENST00000554158 TMEM218A2RU14 115 aa4.44□□□□□ -1.7
ACTN1-212ENST00000554158 H0Y8G0 127 aa4.44□□□□□ -1.7
ACTN1-212ENST00000554158 IGLV6-57P01721 117 aa4.44□□□□□ -1.7
ACTN1-212ENST00000554158 KRTAP15-1Q3LI76 137 aa4.44□□□□□ -1.7
ACTN1-212ENST00000554158 KRTAP19-1Q8IUB9 90 aa4.44□□□□□ -1.7
ACTN1-212ENST00000554158 C12orf57Q99622 126 aa4.44□□□□□ -1.7
ACTN1-212ENST00000554158 RPS10P5Q9NQ39 176 aa4.44□□□□□ -1.7
ACTN1-212ENST00000554158 LAMTOR3Q9UHA4 124 aa4.44□□□□□ -1.7
ACTN1-212ENST00000554158 KRTAP10-6P60371 365 aaPredicted RBP4.43□□□□□ -1.7
ACTN1-212ENST00000554158 HERVK_113P61574 105 aa4.43□□□□□ -1.7
ACTN1-212ENST00000554158 RHEBQ15382 184 aa4.43□□□□□ -1.7
ACTN1-212ENST00000554158 ZNF73O43830 326 aaPredicted RBP4.42□□□□□ -1.7
ACTN1-212ENST00000554158 LGALS3P17931 250 aaKnown RBP4.42□□□□□ -1.7
ACTN1-212ENST00000554158 CHCHD1Q96BP2 118 aaKnown RBP4.42□□□□□ -1.7
ACTN1-212ENST00000554158 LEPROTO15243 131 aa4.41□□□□□ -1.7
ACTN1-212ENST00000554158 NDUFC2O95298 119 aa4.41□□□□□ -1.7
ACTN1-212ENST00000554158 ST20-AS1Q8NBB2 130 aa4.41□□□□□ -1.7
ACTN1-212ENST00000554158 OR13C6PQ8NH95 151 aa4.41□□□□□ -1.7
ACTN1-212ENST00000554158 DHRS4-AS1Q9P1J3 65 aa4.41□□□□□ -1.7
ACTN1-212ENST00000554158 LOC107984156A0A0G2JMH3 177 aa4.4□□□□□ -1.71
ACTN1-212ENST00000554158 H7C2G1 150 aa4.4□□□□□ -1.71
ACTN1-212ENST00000554158 HSBP1O75506 76 aa4.4□□□□□ -1.71
ACTN1-212ENST00000554158 PLNP26678 52 aa4.4□□□□□ -1.71
ACTN1-212ENST00000554158 NMUP48645 174 aa4.4□□□□□ -1.71
ACTN1-212ENST00000554158 TAL2Q16559 108 aa4.4□□□□□ -1.71
ACTN1-212ENST00000554158 KRTAP19-2Q3LHN2 52 aa4.4□□□□□ -1.71
ACTN1-212ENST00000554158 ARL17AQ8IVW1 177 aa4.4□□□□□ -1.71
ACTN1-212ENST00000554158 J3QQQ9 107 aa4.39□□□□□ -1.71
ACTN1-212ENST00000554158 SMIM6P0DI80 62 aa4.39□□□□□ -1.71
ACTN1-212ENST00000554158 NPC2P61916 151 aa4.39□□□□□ -1.71
ACTN1-212ENST00000554158 PRO1933Q9H354 126 aa4.39□□□□□ -1.71
ACTN1-212ENST00000554158 CD164Q04900 197 aa4.38□□□□□ -1.71
ACTN1-212ENST00000554158 Q6Q795 121 aa4.38□□□□□ -1.71
ACTN1-212ENST00000554158 DEFB105AQ8NG35 78 aa4.38□□□□□ -1.71
ACTN1-212ENST00000554158 AKR1D1P51857 326 aa4.37□□□□□ -1.71
ACTN1-212ENST00000554158 Q1RN00 199 aa4.37□□□□□ -1.71
ACTN1-212ENST00000554158 KRTAP4-12Q9BQ66 201 aa4.37□□□□□ -1.71
ACTN1-212ENST00000554158 DPM2O94777 84 aa4.36□□□□□ -1.71
ACTN1-212ENST00000554158 LEPROTL1O95214 131 aa4.36□□□□□ -1.71
ACTN1-212ENST00000554158 SPRR1BP22528 89 aa4.36□□□□□ -1.71
ACTN1-212ENST00000554158 TSPEAR-AS2P59090 65 aa4.36□□□□□ -1.71
ACTN1-212ENST00000554158 RPL37P61927 97 aaKnown RBP4.36□□□□□ -1.71
ACTN1-212ENST00000554158 TEX49A0A1B0GTD5 131 aa4.35□□□□□ -1.71
ACTN1-212ENST00000554158 TCL1BO95988 128 aa4.35□□□□□ -1.71
ACTN1-212ENST00000554158 COX7BP24311 80 aa4.35□□□□□ -1.71
ACTN1-212ENST00000554158 HSPB8Q9UJY1 196 aa4.35□□□□□ -1.71
ACTN1-212ENST00000554158 KRTAP9-7A8MTY7 169 aa4.34□□□□□ -1.71
ACTN1-212ENST00000554158 IGKCP01834 107 aa4.34□□□□□ -1.71
ACTN1-212ENST00000554158 SPANXCQ9NY87 97 aa4.34□□□□□ -1.71
ACTN1-212ENST00000554158 A0A0J9YXY3 114 aa4.33□□□□□ -1.72
ACTN1-212ENST00000554158 APOC3P02656 99 aa4.33□□□□□ -1.72
ACTN1-212ENST00000554158 C10orf91Q5T1B1 145 aa4.33□□□□□ -1.72
ACTN1-212ENST00000554158 C1orf195Q5TG92 126 aa4.33□□□□□ -1.72
ACTN1-212ENST00000554158 ATP11AUNQ6ZP68 121 aa4.33□□□□□ -1.72
ACTN1-212ENST00000554158 SPANXDQ9BXN6 97 aa4.33□□□□□ -1.72
ACTN1-212ENST00000554158 F8WEM9 126 aa4.32□□□□□ -1.72
ACTN1-212ENST00000554158 CFC1P0CG37 223 aa4.32□□□□□ -1.72
ACTN1-212ENST00000554158 ELOF1P60002 83 aaKnown RBP4.32□□□□□ -1.72
ACTN1-212ENST00000554158 C6orf99Q4VX62 202 aa4.32□□□□□ -1.72
ACTN1-212ENST00000554158 Q5XG85 94 aa4.32□□□□□ -1.72
ACTN1-212ENST00000554158 SOSTDC1Q6X4U4 206 aa4.32□□□□□ -1.72
ACTN1-212ENST00000554158 SVBPQ8N300 66 aa4.32□□□□□ -1.72
ACTN1-212ENST00000554158 PMCHL2Q9BQD1 86 aa4.32□□□□□ -1.72
ACTN1-212ENST00000554158 KRTAP4-8Q9BYQ9 185 aa4.32□□□□□ -1.72
ACTN1-212ENST00000554158 FABP4P15090 132 aa4.31□□□□□ -1.72
ACTN1-212ENST00000554158 SMIM29Q86T20 159 aa4.31□□□□□ -1.72
ACTN1-212ENST00000554158 PCP2Q8IVA1 136 aa4.31□□□□□ -1.72
ACTN1-212ENST00000554158 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.3□□□□□ -1.72
ACTN1-212ENST00000554158 ADAMTSL4-AS1Q5T5F5 129 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms