RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 CASC2Q6XLA1 102 aa2.75□□□□□ -1.97
RDH11-204ENST00000553578 ZNF702PQ9H963 129 aa2.75□□□□□ -1.97
RDH11-204ENST00000553578 PDZD2O15018 2839 aa2.74□□□□□ -1.97
RDH11-204ENST00000553578 MYO18BQ8IUG5 2567 aa2.74□□□□□ -1.97
RDH11-204ENST00000553578 PIEZO1Q92508 2521 aa2.74□□□□□ -1.97
RDH11-204ENST00000553578 FN1P02751 2386 aaKnown RBP2.74□□□□□ -1.97
RDH11-204ENST00000553578 LY6EQ16553 131 aa2.74□□□□□ -1.97
RDH11-204ENST00000553578 IGHV7-4-1A0A0J9YVY3 117 aa2.73□□□□□ -1.97
RDH11-204ENST00000553578 GNRH2O43555 120 aa2.73□□□□□ -1.97
RDH11-204ENST00000553578 ZFYVE26Q68DK2 2539 aa2.73□□□□□ -1.97
RDH11-204ENST00000553578 CFAP46Q8IYW2 2715 aa2.73□□□□□ -1.97
RDH11-204ENST00000553578 ANKRD17O75179 2603 aaKnown RBP2.73□□□□□ -1.97
RDH11-204ENST00000553578 IGKV2-29A2NJV5 120 aaPredicted RBP2.73□□□□□ -1.97
RDH11-204ENST00000553578 ERC2-IT1O76042 136 aa2.73□□□□□ -1.97
RDH11-204ENST00000553578 SMIM11BQ8TCY0 68 aa2.73□□□□□ -1.97
RDH11-204ENST00000553578 CYP4F30PQ9H0H9 118 aa2.73□□□□□ -1.97
RDH11-204ENST00000553578 CDC42SE1Q9NRR8 79 aa2.73□□□□□ -1.97
RDH11-204ENST00000553578 CMYA5Q8N3K9 4069 aa2.73□□□□□ -1.97
RDH11-204ENST00000553578 MOBPQ13875 183 aa2.73□□□□□ -1.97
RDH11-204ENST00000553578 NAV2Q8IVL1 2488 aa2.73□□□□□ -1.97
RDH11-204ENST00000553578 ZFAND2AQ8N6M9 145 aa2.72□□□□□ -1.97
RDH11-204ENST00000553578 C4orf3Q8WVX3 66 aa2.72□□□□□ -1.97
RDH11-204ENST00000553578 NOTCH2Q04721 2471 aa2.72□□□□□ -1.97
RDH11-204ENST00000553578 LINC00158P58513 81 aa2.72□□□□□ -1.97
RDH11-204ENST00000553578 Q8N9L7 120 aa2.72□□□□□ -1.97
RDH11-204ENST00000553578 ABCA12Q86UK0 2595 aa2.72□□□□□ -1.97
RDH11-204ENST00000553578 HIVEP3Q5T1R4 2406 aa2.72□□□□□ -1.97
RDH11-204ENST00000553578 LINC00315P59091 139 aa2.71□□□□□ -1.97
RDH11-204ENST00000553578 BRD3OSQ6XYD6 125 aa2.71□□□□□ -1.97
RDH11-204ENST00000553578 OBSCN-AS1Q96MR7 158 aa2.71□□□□□ -1.97
RDH11-204ENST00000553578 PKD1L2Q7Z442 2459 aa2.71□□□□□ -1.98
RDH11-204ENST00000553578 TRBV6-5A0A0K0K1A5 114 aa2.71□□□□□ -1.98
RDH11-204ENST00000553578 NDUFA1O15239 70 aa2.71□□□□□ -1.98
RDH11-204ENST00000553578 TOMM7Q9P0U1 55 aa2.71□□□□□ -1.98
RDH11-204ENST00000553578 CRYBG3Q68DQ2 2970 aa2.71□□□□□ -1.98
RDH11-204ENST00000553578 EPG5Q9HCE0 2579 aa2.71□□□□□ -1.98
RDH11-204ENST00000553578 ASB16-AS1Q495Z4 193 aa2.71□□□□□ -1.98
RDH11-204ENST00000553578 ADM2Q7Z4H4 148 aa2.71□□□□□ -1.98
RDH11-204ENST00000553578 PRR9Q5T870 116 aa2.71□□□□□ -1.98
RDH11-204ENST00000553578 LINC01006Q8NI28 216 aa2.71□□□□□ -1.98
RDH11-204ENST00000553578 COX7B2Q8TF08 81 aa2.71□□□□□ -1.98
RDH11-204ENST00000553578 IGSF10Q6WRI0 2623 aa2.7□□□□□ -1.98
RDH11-204ENST00000553578 MTORP42345 2549 aa2.7□□□□□ -1.98
RDH11-204ENST00000553578 POLR2KP53803 58 aaKnown RBP2.7□□□□□ -1.98
RDH11-204ENST00000553578 CIRBP-AS1Q8TBR5 109 aa2.7□□□□□ -1.98
RDH11-204ENST00000553578 CDKN2A-AS1Q9UH64 79 aa2.7□□□□□ -1.98
RDH11-204ENST00000553578 IGKV3OR2-268A0A0C4DH90 116 aa2.7□□□□□ -1.98
RDH11-204ENST00000553578 DEFB112Q30KQ8 113 aa2.7□□□□□ -1.98
RDH11-204ENST00000553578 LINC00208Q96KT6 92 aa2.7□□□□□ -1.98
RDH11-204ENST00000553578 ZANQ9Y493 2812 aa2.69□□□□□ -1.98
RDH11-204ENST00000553578 UTP20O75691 2785 aaKnown RBP2.69□□□□□ -1.98
RDH11-204ENST00000553578 LRRK2Q5S007 2527 aa2.69□□□□□ -1.98
RDH11-204ENST00000553578 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.69□□□□□ -1.98
RDH11-204ENST00000553578 C3orf84H3BNL1 204 aa2.69□□□□□ -1.98
RDH11-204ENST00000553578 C1orf134Q5TEV5 83 aa2.69□□□□□ -1.98
RDH11-204ENST00000553578 B9D2Q9BPU9 175 aa2.69□□□□□ -1.98
RDH11-204ENST00000553578 F8P00451 2351 aa2.69□□□□□ -1.98
RDH11-204ENST00000553578 LOC101927531A0A1B0GV80 90 aa2.69□□□□□ -1.98
RDH11-204ENST00000553578 A8MWP4 228 aa2.69□□□□□ -1.98
RDH11-204ENST00000553578 H3BUX3 64 aa2.69□□□□□ -1.98
RDH11-204ENST00000553578 NTM-AS1Q6ZSK4 140 aa2.69□□□□□ -1.98
RDH11-204ENST00000553578 Q8N9P0 234 aaPredicted RBP2.69□□□□□ -1.98
RDH11-204ENST00000553578 CHCHD7Q9BUK0 85 aa2.69□□□□□ -1.98
RDH11-204ENST00000553578 CSMD3Q7Z407 3707 aa2.69□□□□□ -1.98
RDH11-204ENST00000553578 DYNC2H1Q8NCM8 4307 aaKnown RBP2.69□□□□□ -1.98
RDH11-204ENST00000553578 LINC00483Q53H64 154 aa2.68□□□□□ -1.98
RDH11-204ENST00000553578 NBEAL2Q6ZNJ1 2754 aa2.68□□□□□ -1.98
RDH11-204ENST00000553578 HIVEP2P31629 2446 aa2.68□□□□□ -1.98
RDH11-204ENST00000553578 USP24Q9UPU5 2620 aa2.68□□□□□ -1.98
RDH11-204ENST00000553578 RNASE3P12724 160 aaKnown RBP2.68□□□□□ -1.98
RDH11-204ENST00000553578 KRTAP10-9P60411 292 aa2.68□□□□□ -1.98
RDH11-204ENST00000553578 LINC00612Q8N6U2 182 aa2.68□□□□□ -1.98
RDH11-204ENST00000553578 C7orf33Q8WU49 177 aa2.68□□□□□ -1.98
RDH11-204ENST00000553578 WFDC10AQ9H1F0 79 aa2.68□□□□□ -1.98
RDH11-204ENST00000553578 DNAH1Q9P2D7 4330 aa2.68□□□□□ -1.98
RDH11-204ENST00000553578 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.68□□□□□ -1.98
RDH11-204ENST00000553578 NDUFB1O75438 58 aa2.68□□□□□ -1.98
RDH11-204ENST00000553578 IGLV7-43P04211 117 aa2.68□□□□□ -1.98
RDH11-204ENST00000553578 Q8N377 158 aa2.68□□□□□ -1.98
RDH11-204ENST00000553578 ZNF462Q96JM2 2506 aa2.67□□□□□ -1.98
RDH11-204ENST00000553578 M0R2N4 97 aa2.67□□□□□ -1.98
RDH11-204ENST00000553578 TLX1NBP0CAT3 122 aa2.67□□□□□ -1.98
RDH11-204ENST00000553578 SPINK13Q1W4C9 94 aa2.67□□□□□ -1.98
RDH11-204ENST00000553578 Q6ZQT0 140 aa2.67□□□□□ -1.98
RDH11-204ENST00000553578 CDC42SE2Q9NRR3 84 aa2.67□□□□□ -1.98
RDH11-204ENST00000553578 FLNCQ14315 2725 aa2.67□□□□□ -1.98
RDH11-204ENST00000553578 SPAG11BQ08648 103 aa2.67□□□□□ -1.98
RDH11-204ENST00000553578 FAM104AQ969W3 186 aa2.67□□□□□ -1.98
RDH11-204ENST00000553578 ACANP16112 2415 aa2.67□□□□□ -1.98
RDH11-204ENST00000553578 CHD6Q8TD26 2715 aa2.67□□□□□ -1.98
RDH11-204ENST00000553578 CELSR2Q9HCU4 2923 aa2.67□□□□□ -1.98
RDH11-204ENST00000553578 PDE6GP18545 87 aa2.67□□□□□ -1.98
RDH11-204ENST00000553578 SMIM29Q86T20 159 aa2.67□□□□□ -1.98
RDH11-204ENST00000553578 Q8N814 137 aa2.67□□□□□ -1.98
RDH11-204ENST00000553578 RHPN1-AS1Q9BWJ2 59 aa2.67□□□□□ -1.98
RDH11-204ENST00000553578 J3QKU1 62 aa2.66□□□□□ -1.98
RDH11-204ENST00000553578 MAPK1IP1LQ8NDC0 245 aa2.66□□□□□ -1.98
RDH11-204ENST00000553578 NF1P21359 2839 aa2.66□□□□□ -1.98
RDH11-204ENST00000553578 NIPBLQ6KC79 2804 aaeCLIP2.66□□□□□ -1.98
RDH11-204ENST00000553578 IGHV3-53P01767 116 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms