RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 SPANXCQ9NY87 97 aa10.94□□□□□ -0.66
HDAC4-217ENST00000553145 TRAV23DV6A0A075B6W5 121 aa10.93□□□□□ -0.66
HDAC4-217ENST00000553145 Q9BRP9 147 aa10.93□□□□□ -0.66
HDAC4-217ENST00000553145 ZNF706Q9Y5V0 76 aaPredicted RBP10.93□□□□□ -0.66
HDAC4-217ENST00000553145 ERC2-IT1O76042 136 aa10.92□□□□□ -0.66
HDAC4-217ENST00000553145 Q6ZRX8 168 aa10.92□□□□□ -0.66
HDAC4-217ENST00000553145 LINC00304Q8N9R0 145 aa10.92□□□□□ -0.66
HDAC4-217ENST00000553145 PRR4Q16378 134 aa10.91□□□□□ -0.66
HDAC4-217ENST00000553145 PPDPFQ9H3Y8 114 aa10.91□□□□□ -0.66
HDAC4-217ENST00000553145 S100A2P29034 98 aa10.9□□□□□ -0.66
HDAC4-217ENST00000553145 PCP2Q8IVA1 136 aa10.9□□□□□ -0.66
HDAC4-217ENST00000553145 ZNF73O43830 326 aaPredicted RBP10.89□□□□□ -0.67
HDAC4-217ENST00000553145 SCGB1D4Q6XE38 83 aa10.89□□□□□ -0.67
HDAC4-217ENST00000553145 SPANXDQ9BXN6 97 aa10.89□□□□□ -0.67
HDAC4-217ENST00000553145 AKR1D1P51857 326 aa10.88□□□□□ -0.67
HDAC4-217ENST00000553145 LINC00483Q53H64 154 aa10.87□□□□□ -0.67
HDAC4-217ENST00000553145 OR13C6PQ8NH95 151 aa10.87□□□□□ -0.67
HDAC4-217ENST00000553145 S100A6P06703 90 aa10.86□□□□□ -0.67
HDAC4-217ENST00000553145 GAGE2AQ6NT46 116 aa10.86□□□□□ -0.67
HDAC4-217ENST00000553145 SNRPEP62304 92 aaKnown RBP10.84□□□□□ -0.67
HDAC4-217ENST00000553145 RETNLBQ9BQ08 111 aa10.84□□□□□ -0.67
HDAC4-217ENST00000553145 RNF213Q63HN8 5207 aa10.83□□□□□ -0.68
HDAC4-217ENST00000553145 JOSD1Q15040 202 aaPredicted RBP10.82□□□□□ -0.68
HDAC4-217ENST00000553145 LINC00518Q8N0U6 118 aa10.82□□□□□ -0.68
HDAC4-217ENST00000553145 CBY1Q9Y3M2 126 aa10.82□□□□□ -0.68
HDAC4-217ENST00000553145 IFITM1P13164 125 aa10.81□□□□□ -0.68
HDAC4-217ENST00000553145 MUSTN1Q8IVN3 82 aa10.8□□□□□ -0.68
HDAC4-217ENST00000553145 ST20-AS1Q8NBB2 130 aa10.8□□□□□ -0.68
HDAC4-217ENST00000553145 Q8NBF4 154 aa10.8□□□□□ -0.68
HDAC4-217ENST00000553145 Q6ZVH6 145 aa10.79□□□□□ -0.68
HDAC4-217ENST00000553145 IGLV9-49A0A0B4J1Y8 123 aa10.78□□□□□ -0.68
HDAC4-217ENST00000553145 C5orf52A6NGY3 159 aa10.78□□□□□ -0.68
HDAC4-217ENST00000553145 HINT1P49773 126 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-217ENST00000553145 CTAG1AP78358 180 aa10.78□□□□□ -0.68
HDAC4-217ENST00000553145 MOBPQ13875 183 aa10.77□□□□□ -0.69
HDAC4-217ENST00000553145 C6orf99Q4VX62 202 aa10.77□□□□□ -0.69
HDAC4-217ENST00000553145 SPAG11AQ6PDA7 123 aa10.77□□□□□ -0.69
HDAC4-217ENST00000553145 COPS9Q8WXC6 57 aa10.77□□□□□ -0.69
HDAC4-217ENST00000553145 HSBP1L1C9JCN9 74 aa10.76□□□□□ -0.69
HDAC4-217ENST00000553145 ELOF1P60002 83 aaKnown RBP10.75□□□□□ -0.69
HDAC4-217ENST00000553145 COX7BP24311 80 aa10.74□□□□□ -0.69
HDAC4-217ENST00000553145 SCGB1D1O95968 90 aa10.73□□□□□ -0.69
HDAC4-217ENST00000553145 DHRS4-AS1Q9P1J3 65 aa10.73□□□□□ -0.69
HDAC4-217ENST00000553145 A6NDN8 102 aa10.72□□□□□ -0.69
HDAC4-217ENST00000553145 C4orf48Q5BLP8 95 aa10.72□□□□□ -0.69
HDAC4-217ENST00000553145 SSBP3-AS1Q7Z2R9 100 aa10.71□□□□□ -0.69
HDAC4-217ENST00000553145 SPRR1BP22528 89 aa10.69□□□□□ -0.7
HDAC4-217ENST00000553145 IGLV7-46A0A075B6I9 117 aa10.68□□□□□ -0.7
HDAC4-217ENST00000553145 TRBV7-6A0A0J9YX20 115 aa10.68□□□□□ -0.7
HDAC4-217ENST00000553145 SPINK1P00995 79 aa10.68□□□□□ -0.7
HDAC4-217ENST00000553145 C9orf153Q5TBE3 101 aa10.68□□□□□ -0.7
HDAC4-217ENST00000553145 TRAV13-2A0A0B4J235 113 aa10.67□□□□□ -0.7
HDAC4-217ENST00000553145 SMIM11BQ8TCY0 68 aa10.66□□□□□ -0.7
HDAC4-217ENST00000553145 A0A1B0GWB2 263 aa10.65□□□□□ -0.7
HDAC4-217ENST00000553145 A4D1N5 150 aa10.65□□□□□ -0.7
HDAC4-217ENST00000553145 COX8AP10176 69 aa10.65□□□□□ -0.7
HDAC4-217ENST00000553145 TPRXLQ17RH7 258 aa10.64□□□□□ -0.71
HDAC4-217ENST00000553145 RPS29P62273 56 aaKnown RBP10.62□□□□□ -0.71
HDAC4-217ENST00000553145 DEFB105AQ8NG35 78 aa10.62□□□□□ -0.71
HDAC4-217ENST00000553145 FP248Q71RG6 208 aaPredicted RBP10.61□□□□□ -0.71
HDAC4-217ENST00000553145 Q8N377 158 aa10.61□□□□□ -0.71
HDAC4-217ENST00000553145 LINC01547P58512 204 aaPredicted RBP10.6□□□□□ -0.71
HDAC4-217ENST00000553145 TAL2Q16559 108 aa10.6□□□□□ -0.71
HDAC4-217ENST00000553145 SLC25A34Q6PIV7 304 aa10.6□□□□□ -0.71
HDAC4-217ENST00000553145 DLEU1O43261 78 aa10.59□□□□□ -0.71
HDAC4-217ENST00000553145 Q1RN00 199 aa10.59□□□□□ -0.71
HDAC4-217ENST00000553145 C14orf144Q96I85 54 aa10.59□□□□□ -0.71
HDAC4-217ENST00000553145 HIST1H4GQ99525 98 aa10.59□□□□□ -0.71
HDAC4-217ENST00000553145 LAMTOR3Q9UHA4 124 aa10.59□□□□□ -0.71
HDAC4-217ENST00000553145 PAM16Q9Y3D7 125 aa10.59□□□□□ -0.71
HDAC4-217ENST00000553145 TEX49A0A1B0GTD5 131 aa10.58□□□□□ -0.72
HDAC4-217ENST00000553145 C12orf57Q99622 126 aa10.58□□□□□ -0.72
HDAC4-217ENST00000553145 CDIP1Q9H305 208 aa10.58□□□□□ -0.72
HDAC4-217ENST00000553145 IGLV5-48A0A075B6I7 105 aa10.57□□□□□ -0.72
HDAC4-217ENST00000553145 SPATA45Q537H7 98 aa10.57□□□□□ -0.72
HDAC4-217ENST00000553145 SMIM29Q86T20 159 aa10.57□□□□□ -0.72
HDAC4-217ENST00000553145 SLC25A20O43772 301 aa10.55□□□□□ -0.72
HDAC4-217ENST00000553145 KRTAP13-3Q3SY46 172 aa10.54□□□□□ -0.72
HDAC4-217ENST00000553145 VAMP8Q9BV40 100 aa10.54□□□□□ -0.72
HDAC4-217ENST00000553145 HRCT1Q6UXD1 115 aa10.53□□□□□ -0.72
HDAC4-217ENST00000553145 NHP2Q9NX24 153 aaKnown RBP10.53□□□□□ -0.72
HDAC4-217ENST00000553145 MUC17Q685J3 4493 aa10.53□□□□□ -0.72
HDAC4-217ENST00000553145 LINC00575Q6W349 94 aa10.52□□□□□ -0.73
HDAC4-217ENST00000553145 C2orf91Q6ZV80 131 aa10.52□□□□□ -0.73
HDAC4-217ENST00000553145 VAMP3Q15836 100 aa10.51□□□□□ -0.73
HDAC4-217ENST00000553145 HIGD1BQ9P298 99 aa10.51□□□□□ -0.73
HDAC4-217ENST00000553145 MUC2Q02817 5179 aa10.51□□□□□ -0.73
HDAC4-217ENST00000553145 PRO1933Q9H354 126 aa10.49□□□□□ -0.73
HDAC4-217ENST00000553145 A0A0G2JQZ4 141 aa10.48□□□□□ -0.73
HDAC4-217ENST00000553145 CFC1BP0CG36 223 aa10.48□□□□□ -0.73
HDAC4-217ENST00000553145 CFC1P0CG37 223 aa10.48□□□□□ -0.73
HDAC4-217ENST00000553145 PYY3Q5JQD4 70 aa10.47□□□□□ -0.73
HDAC4-217ENST00000553145 hADV29S1A0JD25 119 aa10.46□□□□□ -0.73
HDAC4-217ENST00000553145 Q6ZQY7 126 aa10.46□□□□□ -0.73
HDAC4-217ENST00000553145 H7C2G1 150 aa10.45□□□□□ -0.74
HDAC4-217ENST00000553145 CD164Q04900 197 aa10.45□□□□□ -0.74
HDAC4-217ENST00000553145 LIMD2Q9BT23 127 aa10.45□□□□□ -0.74
HDAC4-217ENST00000553145 TMA7Q9Y2S6 64 aaKnown RBP10.45□□□□□ -0.74
HDAC4-217ENST00000553145 BVES-AS1Q5T3Y7 98 aa10.43□□□□□ -0.74
HDAC4-217ENST00000553145 A0A0B4J2C4 111 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms