RNA–Protein interactions for RNA: ENST00000552329.1

CHPT1-209, Transcript of choline phosphotransferase 1, humanhuman

TSL 4

Gene CHPT1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-209ENST00000552329 DMBT1Q9UGM3 2413 aaPredicted RBP3.2□□□□□ -1.9
CHPT1-209ENST00000552329 TINCRA0A1B0GVN0 87 aa3.2□□□□□ -1.9
CHPT1-209ENST00000552329 LINC01546A6NGU7 62 aa3.2□□□□□ -1.9
CHPT1-209ENST00000552329 LINC01549A6NIU2 74 aa3.2□□□□□ -1.9
CHPT1-209ENST00000552329 H3BRM9 83 aa3.2□□□□□ -1.9
CHPT1-209ENST00000552329 COX7B2Q8TF08 81 aa3.2□□□□□ -1.9
CHPT1-209ENST00000552329 IFI27L1Q96BM0 104 aa3.2□□□□□ -1.9
CHPT1-209ENST00000552329 ZNF625Q96I27 306 aaPredicted RBP3.2□□□□□ -1.9
CHPT1-209ENST00000552329 LINC00474Q9P2X8 69 aa3.2□□□□□ -1.9
CHPT1-209ENST00000552329 PKIGQ9Y2B9 76 aa3.2□□□□□ -1.9
CHPT1-209ENST00000552329 ABCA13Q86UQ4 5058 aa3.2□□□□□ -1.9
CHPT1-209ENST00000552329 A0A1W2PNN7 141 aa3.19□□□□□ -1.9
CHPT1-209ENST00000552329 NUPR1O60356 82 aa3.19□□□□□ -1.9
CHPT1-209ENST00000552329 PFN2P35080 140 aa3.19□□□□□ -1.9
CHPT1-209ENST00000552329 PDZD11Q5EBL8 140 aa3.19□□□□□ -1.9
CHPT1-209ENST00000552329 PHF5AQ7RTV0 110 aaKnown RBP3.19□□□□□ -1.9
CHPT1-209ENST00000552329 CHCHD1Q96BP2 118 aaKnown RBP3.19□□□□□ -1.9
CHPT1-209ENST00000552329 XAGE1AQ9HD64 81 aa3.19□□□□□ -1.9
CHPT1-209ENST00000552329 MRPL35Q9NZE8 188 aaKnown RBP3.19□□□□□ -1.9
CHPT1-209ENST00000552329 PLAC8Q9NZF1 115 aa3.19□□□□□ -1.9
CHPT1-209ENST00000552329 C11orf86A6NJI1 115 aa3.18□□□□□ -1.9
CHPT1-209ENST00000552329 LEPROTL1O95214 131 aa3.18□□□□□ -1.9
CHPT1-209ENST00000552329 IGLC3P0DOY3 106 aa3.18□□□□□ -1.9
CHPT1-209ENST00000552329 ZNF22P17026 224 aaPredicted RBP3.18□□□□□ -1.9
CHPT1-209ENST00000552329 UBE2BP63146 152 aa3.18□□□□□ -1.9
CHPT1-209ENST00000552329 CIRBPQ14011 172 aaKnown RBP3.18□□□□□ -1.9
CHPT1-209ENST00000552329 Q8IZM0 81 aa3.18□□□□□ -1.9
CHPT1-209ENST00000552329 PMCHL2Q9BQD1 86 aa3.18□□□□□ -1.9
CHPT1-209ENST00000552329 TRBV30A0A0K0K1B3 111 aa3.17□□□□□ -1.9
CHPT1-209ENST00000552329 NDUFC2-KCTD14E9PQ53 114 aa3.17□□□□□ -1.9
CHPT1-209ENST00000552329 F8VRH5 84 aa3.17□□□□□ -1.9
CHPT1-209ENST00000552329 M0QXV9 152 aa3.17□□□□□ -1.9
CHPT1-209ENST00000552329 FAM19A3Q7Z5A8 133 aa3.17□□□□□ -1.9
CHPT1-209ENST00000552329 DNAH8Q96JB1 4490 aa3.17□□□□□ -1.9
CHPT1-209ENST00000552329 HIST1H2BKO60814 126 aa3.16□□□□□ -1.9
CHPT1-209ENST00000552329 HIST1H2BJP06899 126 aa3.16□□□□□ -1.9
CHPT1-209ENST00000552329 HIST1H2BOP23527 126 aa3.16□□□□□ -1.9
CHPT1-209ENST00000552329 HIST1H2BBP33778 126 aa3.16□□□□□ -1.9
CHPT1-209ENST00000552329 LINC00158P58513 81 aa3.16□□□□□ -1.9
CHPT1-209ENST00000552329 HIST1H2BDP58876 126 aa3.16□□□□□ -1.9
CHPT1-209ENST00000552329 HIST1H2BCP62807 126 aa3.16□□□□□ -1.9
CHPT1-209ENST00000552329 HIST2H2BEQ16778 126 aa3.16□□□□□ -1.9
CHPT1-209ENST00000552329 C1orf137Q5JT78 98 aa3.16□□□□□ -1.9
CHPT1-209ENST00000552329 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.16□□□□□ -1.9
CHPT1-209ENST00000552329 Q5W150 140 aa3.16□□□□□ -1.9
CHPT1-209ENST00000552329 HIST1H2BHQ93079 126 aa3.16□□□□□ -1.9
CHPT1-209ENST00000552329 HIST1H2BNQ99877 126 aa3.16□□□□□ -1.9
CHPT1-209ENST00000552329 HIST1H2BMQ99879 126 aa3.16□□□□□ -1.9
CHPT1-209ENST00000552329 HSPB8Q9UJY1 196 aa3.16□□□□□ -1.9
CHPT1-209ENST00000552329 TRAV12-1A0A0B4J245 112 aa3.15□□□□□ -1.91
CHPT1-209ENST00000552329 A0A1B0GVX0 72 aa3.15□□□□□ -1.91
CHPT1-209ENST00000552329 KRTAP10-4P60372 401 aaPredicted RBP3.15□□□□□ -1.91
CHPT1-209ENST00000552329 PRR3P79522 188 aaKnown RBP3.15□□□□□ -1.91
CHPT1-209ENST00000552329 TAL2Q16559 108 aa3.15□□□□□ -1.91
CHPT1-209ENST00000552329 MEIG1Q5JSS6 88 aa3.15□□□□□ -1.91
CHPT1-209ENST00000552329 PSORS1C2Q9UIG4 136 aa3.15□□□□□ -1.91
CHPT1-209ENST00000552329 ERG28Q9UKR5 140 aa3.15□□□□□ -1.91
CHPT1-209ENST00000552329 TMEM223A0PJW6 202 aa3.14□□□□□ -1.91
CHPT1-209ENST00000552329 DPM2O94777 84 aa3.14□□□□□ -1.91
CHPT1-209ENST00000552329 S100A1P23297 94 aa3.14□□□□□ -1.91
CHPT1-209ENST00000552329 KRTDAPP60985 99 aa3.14□□□□□ -1.91
CHPT1-209ENST00000552329 C22orf24Q9Y442 160 aa3.14□□□□□ -1.91
CHPT1-209ENST00000552329 IGKCP01834 107 aa3.13□□□□□ -1.91
CHPT1-209ENST00000552329 SMIM13P0DJ93 91 aa3.13□□□□□ -1.91
CHPT1-209ENST00000552329 LGALS3P17931 250 aaKnown RBP3.13□□□□□ -1.91
CHPT1-209ENST00000552329 SYS1-DBNDD2H3BUS1 97 aa3.12□□□□□ -1.91
CHPT1-209ENST00000552329 LEPROTO15243 131 aa3.12□□□□□ -1.91
CHPT1-209ENST00000552329 PLNP26678 52 aa3.12□□□□□ -1.91
CHPT1-209ENST00000552329 NPC2P61916 151 aa3.12□□□□□ -1.91
CHPT1-209ENST00000552329 MRPL55Q7Z7F7 128 aaKnown RBP3.12□□□□□ -1.91
CHPT1-209ENST00000552329 DAND5Q8N907 189 aa3.12□□□□□ -1.91
CHPT1-209ENST00000552329 SND1-IT1Q9HBX3 110 aa3.12□□□□□ -1.91
CHPT1-209ENST00000552329 NDUFA12Q9UI09 145 aa3.12□□□□□ -1.91
CHPT1-209ENST00000552329 MYCBP2O75592 4640 aa3.11□□□□□ -1.91
CHPT1-209ENST00000552329 MYMXA0A1B0GTQ4 84 aa3.11□□□□□ -1.91
CHPT1-209ENST00000552329 J3QQQ9 107 aa3.11□□□□□ -1.91
CHPT1-209ENST00000552329 OXTP01178 125 aa3.11□□□□□ -1.91
CHPT1-209ENST00000552329 IGLV7-43P04211 117 aa3.11□□□□□ -1.91
CHPT1-209ENST00000552329 TSPEAR-AS2P59090 65 aa3.11□□□□□ -1.91
CHPT1-209ENST00000552329 KRTAP13-2Q52LG2 175 aa3.11□□□□□ -1.91
CHPT1-209ENST00000552329 SPINK6Q6UWN8 80 aa3.11□□□□□ -1.91
CHPT1-209ENST00000552329 ATOH7Q8N100 152 aa3.11□□□□□ -1.91
CHPT1-209ENST00000552329 MIR7-3HGQ8N6C7 128 aa3.11□□□□□ -1.91
CHPT1-209ENST00000552329 PLEKHB2Q96CS7 222 aa3.11□□□□□ -1.91
CHPT1-209ENST00000552329 NCR3O14931 201 aa3.1□□□□□ -1.91
CHPT1-209ENST00000552329 C3orf79P0CE67 100 aa3.1□□□□□ -1.91
CHPT1-209ENST00000552329 S100A2P29034 98 aa3.1□□□□□ -1.91
CHPT1-209ENST00000552329 COX17Q14061 63 aa3.1□□□□□ -1.91
CHPT1-209ENST00000552329 VPS13BQ7Z7G8 4022 aa3.1□□□□□ -1.91
CHPT1-209ENST00000552329 LRP1Q07954 4544 aaKnown RBP3.1□□□□□ -1.91
CHPT1-209ENST00000552329 C20orf202A1L168 122 aa3.09□□□□□ -1.91
CHPT1-209ENST00000552329 TMEM238C9JI98 176 aa3.09□□□□□ -1.91
CHPT1-209ENST00000552329 SFTA2Q6UW10 78 aa3.09□□□□□ -1.91
CHPT1-209ENST00000552329 FAM19A1Q7Z5A9 133 aa3.09□□□□□ -1.91
CHPT1-209ENST00000552329 Q8NDZ9 215 aa3.09□□□□□ -1.91
CHPT1-209ENST00000552329 DIRC1Q969H9 104 aa3.09□□□□□ -1.91
CHPT1-209ENST00000552329 MIEN1Q9BRT3 115 aa3.09□□□□□ -1.91
CHPT1-209ENST00000552329 TTTY13Q9BZ97 58 aa3.09□□□□□ -1.91
CHPT1-209ENST00000552329 ZNF815PA8K554 130 aa3.08□□□□□ -1.92
CHPT1-209ENST00000552329 LINC00587B1AMM8 73 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms