RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 MAP1LC3CQ9BXW4 147 aa6.36□□□□□ -1.39
PRPF40B-212ENST00000551111 LINC00587B1AMM8 73 aa6.35□□□□□ -1.39
PRPF40B-212ENST00000551111 SLC25A20O43772 301 aa6.35□□□□□ -1.39
PRPF40B-212ENST00000551111 SERF1AO75920 110 aa6.35□□□□□ -1.39
PRPF40B-212ENST00000551111 TRGC2P03986 189 aa6.35□□□□□ -1.39
PRPF40B-212ENST00000551111 RPS29P62273 56 aaKnown RBP6.35□□□□□ -1.39
PRPF40B-212ENST00000551111 LEPROTL1O95214 131 aa6.34□□□□□ -1.39
PRPF40B-212ENST00000551111 FABP4P15090 132 aa6.34□□□□□ -1.39
PRPF40B-212ENST00000551111 C9orf153Q5TBE3 101 aa6.34□□□□□ -1.39
PRPF40B-212ENST00000551111 SPANXB1Q9NS25 103 aaPredicted RBP6.34□□□□□ -1.39
PRPF40B-212ENST00000551111 S100A7L2Q5SY68 101 aa6.33□□□□□ -1.4
PRPF40B-212ENST00000551111 TRAV23DV6A0A075B6W5 121 aa6.32□□□□□ -1.4
PRPF40B-212ENST00000551111 NDUFC2O95298 119 aa6.32□□□□□ -1.4
PRPF40B-212ENST00000551111 S100A12P80511 92 aa6.32□□□□□ -1.4
PRPF40B-212ENST00000551111 NDUFA5Q16718 116 aa6.32□□□□□ -1.4
PRPF40B-212ENST00000551111 A0A0J9YXY3 114 aa6.31□□□□□ -1.4
PRPF40B-212ENST00000551111 ZNF73O43830 326 aaPredicted RBP6.31□□□□□ -1.4
PRPF40B-212ENST00000551111 DPM2O94777 84 aa6.31□□□□□ -1.4
PRPF40B-212ENST00000551111 HRCT1Q6UXD1 115 aa6.31□□□□□ -1.4
PRPF40B-212ENST00000551111 IGKCP01834 107 aa6.3□□□□□ -1.4
PRPF40B-212ENST00000551111 LGALS3P17931 250 aaKnown RBP6.3□□□□□ -1.4
PRPF40B-212ENST00000551111 PLNP26678 52 aa6.3□□□□□ -1.4
PRPF40B-212ENST00000551111 MIEN1Q9BRT3 115 aa6.3□□□□□ -1.4
PRPF40B-212ENST00000551111 CRCT1Q9UGL9 99 aa6.3□□□□□ -1.4
PRPF40B-212ENST00000551111 C9orf92A6NGG3 77 aa6.29□□□□□ -1.4
PRPF40B-212ENST00000551111 NMUP48645 174 aa6.29□□□□□ -1.4
PRPF40B-212ENST00000551111 MT1HP80294 61 aa6.29□□□□□ -1.4
PRPF40B-212ENST00000551111 PCOTHQ58A44 107 aa6.29□□□□□ -1.4
PRPF40B-212ENST00000551111 HERVK_113P61574 105 aa6.28□□□□□ -1.4
PRPF40B-212ENST00000551111 LITAFQ99732 161 aa6.28□□□□□ -1.4
PRPF40B-212ENST00000551111 JOSD1Q15040 202 aaPredicted RBP6.27□□□□□ -1.41
PRPF40B-212ENST00000551111 FSIP2Q5CZC0 6907 aa6.27□□□□□ -1.41
PRPF40B-212ENST00000551111 E9PLD3 99 aa6.26□□□□□ -1.41
PRPF40B-212ENST00000551111 SPRR1BP22528 89 aa6.26□□□□□ -1.41
PRPF40B-212ENST00000551111 HSPB8Q9UJY1 196 aa6.26□□□□□ -1.41
PRPF40B-212ENST00000551111 IGLV8-61A0A075B6I0 122 aa6.25□□□□□ -1.41
PRPF40B-212ENST00000551111 A0A0G2JQZ4 141 aa6.25□□□□□ -1.41
PRPF40B-212ENST00000551111 LINC00308Q8TCZ7 52 aa6.25□□□□□ -1.41
PRPF40B-212ENST00000551111 TTTY13Q9BZ97 58 aa6.25□□□□□ -1.41
PRPF40B-212ENST00000551111 COLCA2A8K830 154 aa6.24□□□□□ -1.41
PRPF40B-212ENST00000551111 OR13C6PQ8NH95 151 aa6.24□□□□□ -1.41
PRPF40B-212ENST00000551111 H7C2G1 150 aa6.23□□□□□ -1.41
PRPF40B-212ENST00000551111 Q1RN00 199 aa6.23□□□□□ -1.41
PRPF40B-212ENST00000551111 C5orf52A6NGY3 159 aa6.22□□□□□ -1.41
PRPF40B-212ENST00000551111 DEFB105AQ8NG35 78 aa6.22□□□□□ -1.41
PRPF40B-212ENST00000551111 SPANXCQ9NY87 97 aa6.22□□□□□ -1.41
PRPF40B-212ENST00000551111 HINT1P49773 126 aaPredicted RBP6.21□□□□□ -1.42
PRPF40B-212ENST00000551111 FLGP20930 4061 aaPredicted RBP6.21□□□□□ -1.42
PRPF40B-212ENST00000551111 SYS1-DBNDD2H3BUS1 97 aa6.2□□□□□ -1.42
PRPF40B-212ENST00000551111 ELOF1P60002 83 aaKnown RBP6.2□□□□□ -1.42
PRPF40B-212ENST00000551111 C6orf99Q4VX62 202 aa6.2□□□□□ -1.42
PRPF40B-212ENST00000551111 SMIM29Q86T20 159 aa6.2□□□□□ -1.42
PRPF40B-212ENST00000551111 SLC7A5P1Q8MH63 180 aa6.2□□□□□ -1.42
PRPF40B-212ENST00000551111 LIMD2Q9BT23 127 aa6.2□□□□□ -1.42
PRPF40B-212ENST00000551111 DHRS4-AS1Q9P1J3 65 aa6.2□□□□□ -1.42
PRPF40B-212ENST00000551111 LAMTOR3Q9UHA4 124 aa6.2□□□□□ -1.42
PRPF40B-212ENST00000551111 COX7BP24311 80 aa6.19□□□□□ -1.42
PRPF40B-212ENST00000551111 KRTAP10-6P60371 365 aaPredicted RBP6.19□□□□□ -1.42
PRPF40B-212ENST00000551111 ZNF815PA8K554 130 aa6.18□□□□□ -1.42
PRPF40B-212ENST00000551111 TIMM17BO60830 172 aa6.18□□□□□ -1.42
PRPF40B-212ENST00000551111 TAL2Q16559 108 aa6.18□□□□□ -1.42
PRPF40B-212ENST00000551111 C1orf195Q5TG92 126 aa6.18□□□□□ -1.42
PRPF40B-212ENST00000551111 SPANXDQ9BXN6 97 aa6.18□□□□□ -1.42
PRPF40B-212ENST00000551111 LINC01545Q5VT33 79 aa6.17□□□□□ -1.42
PRPF40B-212ENST00000551111 HIST1H2BKO60814 126 aa6.16□□□□□ -1.42
PRPF40B-212ENST00000551111 HIST1H2BJP06899 126 aa6.16□□□□□ -1.42
PRPF40B-212ENST00000551111 HIST1H2BOP23527 126 aa6.16□□□□□ -1.42
PRPF40B-212ENST00000551111 HIST1H2BBP33778 126 aa6.16□□□□□ -1.42
PRPF40B-212ENST00000551111 HIST1H2BDP58876 126 aa6.16□□□□□ -1.42
PRPF40B-212ENST00000551111 HIST1H2BCP62807 126 aa6.16□□□□□ -1.42
PRPF40B-212ENST00000551111 CD164Q04900 197 aa6.16□□□□□ -1.42
PRPF40B-212ENST00000551111 HIST2H2BEQ16778 126 aa6.16□□□□□ -1.42
PRPF40B-212ENST00000551111 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.16□□□□□ -1.42
PRPF40B-212ENST00000551111 SLC25A34Q6PIV7 304 aa6.16□□□□□ -1.42
PRPF40B-212ENST00000551111 HIST1H2BHQ93079 126 aa6.16□□□□□ -1.42
PRPF40B-212ENST00000551111 HIST1H2BNQ99877 126 aa6.16□□□□□ -1.42
PRPF40B-212ENST00000551111 HIST1H2BMQ99879 126 aa6.16□□□□□ -1.42
PRPF40B-212ENST00000551111 TEX49A0A1B0GTD5 131 aa6.15□□□□□ -1.42
PRPF40B-212ENST00000551111 PRO1933Q9H354 126 aa6.15□□□□□ -1.42
PRPF40B-212ENST00000551111 CBY1Q9Y3M2 126 aa6.15□□□□□ -1.42
PRPF40B-212ENST00000551111 C3orf79P0CE67 100 aa6.14□□□□□ -1.43
PRPF40B-212ENST00000551111 AKR1D1P51857 326 aa6.13□□□□□ -1.43
PRPF40B-212ENST00000551111 IGLV5-48A0A075B6I7 105 aa6.12□□□□□ -1.43
PRPF40B-212ENST00000551111 CFC1BP0CG36 223 aa6.12□□□□□ -1.43
PRPF40B-212ENST00000551111 RPL37P61927 97 aaKnown RBP6.12□□□□□ -1.43
PRPF40B-212ENST00000551111 ANKRD39Q53RE8 183 aa6.12□□□□□ -1.43
PRPF40B-212ENST00000551111 Q5XG85 94 aa6.12□□□□□ -1.43
PRPF40B-212ENST00000551111 PET117Q6UWS5 81 aa6.12□□□□□ -1.43
PRPF40B-212ENST00000551111 LINC00518Q8N0U6 118 aa6.12□□□□□ -1.43
PRPF40B-212ENST00000551111 TRBV7-6A0A0J9YX20 115 aa6.1□□□□□ -1.43
PRPF40B-212ENST00000551111 A0A1B0GWB2 263 aa6.1□□□□□ -1.43
PRPF40B-212ENST00000551111 A6NDN8 102 aa6.1□□□□□ -1.43
PRPF40B-212ENST00000551111 MUSTN1Q8IVN3 82 aa6.1□□□□□ -1.43
PRPF40B-212ENST00000551111 ATOH7Q8N100 152 aa6.09□□□□□ -1.43
PRPF40B-212ENST00000551111 M0R2T5 61 aa6.08□□□□□ -1.44
PRPF40B-212ENST00000551111 KRTDAPP60985 99 aa6.08□□□□□ -1.44
PRPF40B-212ENST00000551111 SCGB1D4Q6XE38 83 aa6.08□□□□□ -1.44
PRPF40B-212ENST00000551111 PCP2Q8IVA1 136 aa6.08□□□□□ -1.44
PRPF40B-212ENST00000551111 SMIM11BQ8TCY0 68 aa6.08□□□□□ -1.44
PRPF40B-212ENST00000551111 IFITM1P13164 125 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms