RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 TNRC18O15417 2968 aaPredicted RBP10.72□□□□□ -0.69
RBFOX1-212ENST00000550418 LINC01600Q96MT4 127 aa10.72□□□□□ -0.69
RBFOX1-212ENST00000550418 TRAV22A0A0B4J277 110 aa10.71□□□□□ -0.69
RBFOX1-212ENST00000550418 RETNLBQ9BQ08 111 aa10.7□□□□□ -0.7
RBFOX1-212ENST00000550418 NUPR2A6NF83 97 aa10.7□□□□□ -0.7
RBFOX1-212ENST00000550418 LINC01556Q5JQF7 62 aa10.7□□□□□ -0.7
RBFOX1-212ENST00000550418 GVQW2A0A096LPI5 108 aaPredicted RBP10.7□□□□□ -0.7
RBFOX1-212ENST00000550418 TRBV7-4A0A0J9YYF1 115 aa10.7□□□□□ -0.7
RBFOX1-212ENST00000550418 FSHBP01225 129 aa10.7□□□□□ -0.7
RBFOX1-212ENST00000550418 C9orf129Q5T035 196 aaKnown RBP10.7□□□□□ -0.7
RBFOX1-212ENST00000550418 X6R8D5 127 aa10.7□□□□□ -0.7
RBFOX1-212ENST00000550418 SPINK1P00995 79 aa10.7□□□□□ -0.7
RBFOX1-212ENST00000550418 A0A1B0GU69 56 aa10.69□□□□□ -0.7
RBFOX1-212ENST00000550418 VPREB1P12018 145 aa10.68□□□□□ -0.7
RBFOX1-212ENST00000550418 ST20-AS1Q8NBB2 130 aa10.68□□□□□ -0.7
RBFOX1-212ENST00000550418 TEP1Q99973 2627 aaKnown RBP10.67□□□□□ -0.7
RBFOX1-212ENST00000550418 KRTAP24-1Q3LI83 254 aa10.67□□□□□ -0.7
RBFOX1-212ENST00000550418 K7EQZ3 153 aa10.65□□□□□ -0.7
RBFOX1-212ENST00000550418 ACYP2P14621 99 aa10.65□□□□□ -0.7
RBFOX1-212ENST00000550418 CYP4F30PQ9H0H9 118 aa10.65□□□□□ -0.7
RBFOX1-212ENST00000550418 SETXQ7Z333 2677 aaKnown RBP10.65□□□□□ -0.71
RBFOX1-212ENST00000550418 IGSF10Q6WRI0 2623 aa10.64□□□□□ -0.71
RBFOX1-212ENST00000550418 ZZEF1O43149 2961 aa10.63□□□□□ -0.71
RBFOX1-212ENST00000550418 ZNF575Q86XF7 245 aa10.63□□□□□ -0.71
RBFOX1-212ENST00000550418 FLNCQ14315 2725 aa10.63□□□□□ -0.71
RBFOX1-212ENST00000550418 RPL37AP61513 92 aaKnown RBP10.63□□□□□ -0.71
RBFOX1-212ENST00000550418 COL12A1Q99715 3063 aa10.63□□□□□ -0.71
RBFOX1-212ENST00000550418 WIPF1O43516 503 aa10.62□□□□□ -0.71
RBFOX1-212ENST00000550418 LINC00528Q8N1L1 170 aa10.62□□□□□ -0.71
RBFOX1-212ENST00000550418 CFAP47Q6ZTR5 3102 aa10.62□□□□□ -0.71
RBFOX1-212ENST00000550418 SERTAD4-AS1Q5TG53 156 aa10.62□□□□□ -0.71
RBFOX1-212ENST00000550418 DMXL1Q9Y485 3027 aa10.61□□□□□ -0.71
RBFOX1-212ENST00000550418 Q6ZRP5 223 aa10.6□□□□□ -0.71
RBFOX1-212ENST00000550418 CHD6Q8TD26 2715 aa10.6□□□□□ -0.71
RBFOX1-212ENST00000550418 H3BNG1 76 aa10.59□□□□□ -0.71
RBFOX1-212ENST00000550418 LOC400499M0QZD8 3231 aa10.59□□□□□ -0.71
RBFOX1-212ENST00000550418 CD164Q04900 197 aa10.58□□□□□ -0.72
RBFOX1-212ENST00000550418 C8orf87E5RJ46 101 aa10.58□□□□□ -0.72
RBFOX1-212ENST00000550418 COA5Q86WW8 74 aa10.58□□□□□ -0.72
RBFOX1-212ENST00000550418 ATP11AUNQ6ZP68 121 aa10.58□□□□□ -0.72
RBFOX1-212ENST00000550418 IGKV2D-30A0A075B6S6 120 aa10.57□□□□□ -0.72
RBFOX1-212ENST00000550418 IGKV2-30P06310 120 aa10.57□□□□□ -0.72
RBFOX1-212ENST00000550418 OBSCN-AS1Q96MR7 158 aa10.57□□□□□ -0.72
RBFOX1-212ENST00000550418 KALRNO60229 2985 aa10.56□□□□□ -0.72
RBFOX1-212ENST00000550418 KCNQ1DNQ9H478 68 aa10.55□□□□□ -0.72
RBFOX1-212ENST00000550418 A8MWP4 228 aa10.54□□□□□ -0.72
RBFOX1-212ENST00000550418 LOC101927531A0A1B0GV80 90 aa10.53□□□□□ -0.72
RBFOX1-212ENST00000550418 MOBPQ13875 183 aa10.53□□□□□ -0.72
RBFOX1-212ENST00000550418 Q8NAQ8 132 aa10.52□□□□□ -0.72
RBFOX1-212ENST00000550418 USP34Q70CQ2 3546 aa10.52□□□□□ -0.73
RBFOX1-212ENST00000550418 TACC2O95359 2948 aa10.52□□□□□ -0.73
RBFOX1-212ENST00000550418 CSNK1G2-AS1Q8NCQ2 148 aa10.52□□□□□ -0.73
RBFOX1-212ENST00000550418 EPM2AB3EWF7 344 aa10.51□□□□□ -0.73
RBFOX1-212ENST00000550418 C7orf65Q6ZTY9 151 aa10.5□□□□□ -0.73
RBFOX1-212ENST00000550418 Q8N377 158 aa10.5□□□□□ -0.73
RBFOX1-212ENST00000550418 IGLV5-52A0A0A0MRZ9 124 aa10.5□□□□□ -0.73
RBFOX1-212ENST00000550418 TEX15Q9BXT5 2789 aa10.49□□□□□ -0.73
RBFOX1-212ENST00000550418 PHF5AQ7RTV0 110 aaKnown RBP10.48□□□□□ -0.73
RBFOX1-212ENST00000550418 LRBAP50851 2863 aa10.48□□□□□ -0.73
RBFOX1-212ENST00000550418 IGLV1-50A0A075B6I6 118 aa10.47□□□□□ -0.73
RBFOX1-212ENST00000550418 PRR34Q9NV39 138 aa10.47□□□□□ -0.73
RBFOX1-212ENST00000550418 KTN1-AS1Q86SY8 53 aa10.47□□□□□ -0.73
RBFOX1-212ENST00000550418 A0A096LNT2 108 aa10.46□□□□□ -0.73
RBFOX1-212ENST00000550418 FAM168BA1KXE4 195 aa10.46□□□□□ -0.73
RBFOX1-212ENST00000550418 C16orf90A8MZG2 172 aa10.46□□□□□ -0.74
RBFOX1-212ENST00000550418 PRR15Q8IV56 129 aa10.46□□□□□ -0.74
RBFOX1-212ENST00000550418 IGFL1Q6UW32 110 aa10.45□□□□□ -0.74
RBFOX1-212ENST00000550418 GIG44P09565 113 aaPredicted RBP10.44□□□□□ -0.74
RBFOX1-212ENST00000550418 C1orf134Q5TEV5 83 aa10.43□□□□□ -0.74
RBFOX1-212ENST00000550418 UNC79Q9P2D8 2635 aa10.43□□□□□ -0.74
RBFOX1-212ENST00000550418 IGLV8-61A0A075B6I0 122 aa10.41□□□□□ -0.74
RBFOX1-212ENST00000550418 MRPL34Q9BQ48 92 aaKnown RBP10.41□□□□□ -0.74
RBFOX1-212ENST00000550418 BAHCC1Q9P281 2608 aa10.41□□□□□ -0.74
RBFOX1-212ENST00000550418 Q5XG85 94 aa10.41□□□□□ -0.74
RBFOX1-212ENST00000550418 FAM104AQ969W3 186 aa10.41□□□□□ -0.74
RBFOX1-212ENST00000550418 OCR1Q9BZK8 76 aa10.4□□□□□ -0.74
RBFOX1-212ENST00000550418 CYSTM1Q9H1C7 97 aa10.4□□□□□ -0.74
RBFOX1-212ENST00000550418 GCN1Q92616 2671 aaKnown RBP10.4□□□□□ -0.75
RBFOX1-212ENST00000550418 MUC3AQ02505 3323 aa10.39□□□□□ -0.75
RBFOX1-212ENST00000550418 A0A1W2PNM2 257 aa10.39□□□□□ -0.75
RBFOX1-212ENST00000550418 UQCR11O14957 56 aa10.39□□□□□ -0.75
RBFOX1-212ENST00000550418 C15orf56Q8N910 161 aa10.38□□□□□ -0.75
RBFOX1-212ENST00000550418 LINC00588Q9Y4M8 146 aa10.38□□□□□ -0.75
RBFOX1-212ENST00000550418 STAB1Q9NY15 2570 aa10.38□□□□□ -0.75
RBFOX1-212ENST00000550418 UBR5O95071 2799 aaPredicted RBP10.38□□□□□ -0.75
RBFOX1-212ENST00000550418 DNAH10OSP0CZ25 163 aa10.38□□□□□ -0.75
RBFOX1-212ENST00000550418 WWC2-AS2Q96NR7 200 aa10.38□□□□□ -0.75
RBFOX1-212ENST00000550418 LINC00313P59037 77 aa10.37□□□□□ -0.75
RBFOX1-212ENST00000550418 LINC00612Q8N6U2 182 aa10.37□□□□□ -0.75
RBFOX1-212ENST00000550418 ITPR1Q14643 2758 aa10.37□□□□□ -0.75
RBFOX1-212ENST00000550418 SPANXA2-OT1Q8N9U9 137 aa10.36□□□□□ -0.75
RBFOX1-212ENST00000550418 CHTF8P0CG12 524 aa10.36□□□□□ -0.75
RBFOX1-212ENST00000550418 LCA10Q71F78 164 aa10.36□□□□□ -0.75
RBFOX1-212ENST00000550418 C19orf73Q9NVV2 129 aa10.36□□□□□ -0.75
RBFOX1-212ENST00000550418 COL6A5A8TX70 2615 aa10.36□□□□□ -0.75
RBFOX1-212ENST00000550418 A0A0G2JQZ4 141 aa10.35□□□□□ -0.75
RBFOX1-212ENST00000550418 A0A1W2PNN7 141 aa10.35□□□□□ -0.75
RBFOX1-212ENST00000550418 SPACA4Q8TDM5 124 aa10.35□□□□□ -0.75
RBFOX1-212ENST00000550418 Q1T7F1 81 aa10.35□□□□□ -0.75
RBFOX1-212ENST00000550418 NOTCH1P46531 2555 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms