RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 BRK1Q8WUW1 75 aa9.35□□□□□ -0.91
SRP54-202ENST00000546080 HIGD2AQ9BW72 106 aa9.35□□□□□ -0.91
SRP54-202ENST00000546080 MAST4O15021 2626 aa9.34□□□□□ -0.91
SRP54-202ENST00000546080 ANK3Q12955 4377 aaKnown RBP9.34□□□□□ -0.91
SRP54-202ENST00000546080 WFDC10BQ8IUB3 73 aa9.34□□□□□ -0.91
SRP54-202ENST00000546080 OTOGQ6ZRI0 2925 aa9.33□□□□□ -0.92
SRP54-202ENST00000546080 FLNAP21333 2647 aaKnown RBP9.33□□□□□ -0.92
SRP54-202ENST00000546080 ESRGQ1W209 222 aa9.33□□□□□ -0.92
SRP54-202ENST00000546080 C15orf56Q8N910 161 aa9.33□□□□□ -0.92
SRP54-202ENST00000546080 KRTAP26-1Q6PEX3 210 aa9.33□□□□□ -0.92
SRP54-202ENST00000546080 Q6ZRP5 223 aa9.33□□□□□ -0.92
SRP54-202ENST00000546080 PKIGQ9Y2B9 76 aa9.33□□□□□ -0.92
SRP54-202ENST00000546080 KPRPQ5T749 579 aaPredicted RBP9.31□□□□□ -0.92
SRP54-202ENST00000546080 Q6ZTC4 211 aa9.31□□□□□ -0.92
SRP54-202ENST00000546080 Q8N377 158 aa9.31□□□□□ -0.92
SRP54-202ENST00000546080 SMIM29Q86T20 159 aa9.31□□□□□ -0.92
SRP54-202ENST00000546080 NKAPP1Q8N9T2 125 aa9.31□□□□□ -0.92
SRP54-202ENST00000546080 FAM30AQ9NZY2 134 aa9.31□□□□□ -0.92
SRP54-202ENST00000546080 IGLV5-48A0A075B6I7 105 aa9.3□□□□□ -0.92
SRP54-202ENST00000546080 KCNQ1DNQ9H478 68 aa9.3□□□□□ -0.92
SRP54-202ENST00000546080 ACANP16112 2415 aa9.28□□□□□ -0.92
SRP54-202ENST00000546080 A0A1B0GW54 56 aa9.27□□□□□ -0.93
SRP54-202ENST00000546080 C7orf33Q8WU49 177 aa9.26□□□□□ -0.93
SRP54-202ENST00000546080 SYCNQ0VAF6 134 aa9.26□□□□□ -0.93
SRP54-202ENST00000546080 SERTAD4-AS1Q5TG53 156 aa9.26□□□□□ -0.93
SRP54-202ENST00000546080 A0A1W2PNM2 257 aa9.25□□□□□ -0.93
SRP54-202ENST00000546080 DHRS4-AS1Q9P1J3 65 aa9.25□□□□□ -0.93
SRP54-202ENST00000546080 F8WDY8 70 aa9.24□□□□□ -0.93
SRP54-202ENST00000546080 C1orf137Q5JT78 98 aa9.24□□□□□ -0.93
SRP54-202ENST00000546080 IGKV2D-24A0A075B6R9 120 aa9.24□□□□□ -0.93
SRP54-202ENST00000546080 LCE6AA0A183 80 aa9.23□□□□□ -0.93
SRP54-202ENST00000546080 Q6ZRX8 168 aa9.23□□□□□ -0.93
SRP54-202ENST00000546080 H3BNG1 76 aa9.22□□□□□ -0.93
SRP54-202ENST00000546080 Q8NBF4 154 aa9.22□□□□□ -0.93
SRP54-202ENST00000546080 HIVEP1P15822 2718 aa9.22□□□□□ -0.93
SRP54-202ENST00000546080 hDV103S1A0JD37 113 aa9.22□□□□□ -0.93
SRP54-202ENST00000546080 SMR3AQ99954 134 aa9.22□□□□□ -0.93
SRP54-202ENST00000546080 MTORP42345 2549 aa9.21□□□□□ -0.93
SRP54-202ENST00000546080 TNP2Q05952 138 aa9.21□□□□□ -0.94
SRP54-202ENST00000546080 Q9BRP9 147 aa9.21□□□□□ -0.94
SRP54-202ENST00000546080 ETDCA0A1B0GVM5 59 aa9.2□□□□□ -0.94
SRP54-202ENST00000546080 RPL37AP8A6NKH3 93 aa9.2□□□□□ -0.94
SRP54-202ENST00000546080 C1orf195Q5TG92 126 aa9.2□□□□□ -0.94
SRP54-202ENST00000546080 ST20-AS1Q8NBB2 130 aa9.19□□□□□ -0.94
SRP54-202ENST00000546080 SPRR4Q96PI1 79 aa9.19□□□□□ -0.94
SRP54-202ENST00000546080 K7EQZ3 153 aa9.18□□□□□ -0.94
SRP54-202ENST00000546080 DSCR10P59022 87 aa9.18□□□□□ -0.94
SRP54-202ENST00000546080 KRTAP4-16G5E9R7 235 aaPredicted RBP9.17□□□□□ -0.94
SRP54-202ENST00000546080 C1orf64Q8NEQ6 169 aa9.17□□□□□ -0.94
SRP54-202ENST00000546080 ZCCHC13Q8WW36 166 aaKnown RBP9.17□□□□□ -0.94
SRP54-202ENST00000546080 PLA2G2DQ9UNK4 145 aa9.17□□□□□ -0.94
SRP54-202ENST00000546080 HIVEP2P31629 2446 aa9.17□□□□□ -0.94
SRP54-202ENST00000546080 LRCOL1A6NCL2 159 aa9.16□□□□□ -0.94
SRP54-202ENST00000546080 LINC01556Q5JQF7 62 aa9.16□□□□□ -0.94
SRP54-202ENST00000546080 VWFP04275 2813 aa9.16□□□□□ -0.94
SRP54-202ENST00000546080 IGLV1-50A0A075B6I6 118 aa9.16□□□□□ -0.94
SRP54-202ENST00000546080 TLX1NBP0CAT3 122 aa9.15□□□□□ -0.94
SRP54-202ENST00000546080 SPRR1AP35321 89 aa9.15□□□□□ -0.94
SRP54-202ENST00000546080 RETNQ9HD89 108 aa9.15□□□□□ -0.94
SRP54-202ENST00000546080 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.14□□□□□ -0.95
SRP54-202ENST00000546080 FAM168BA1KXE4 195 aa9.14□□□□□ -0.95
SRP54-202ENST00000546080 Q1T7F1 81 aa9.14□□□□□ -0.95
SRP54-202ENST00000546080 IGLV5-37A0A075B6J1 123 aa9.13□□□□□ -0.95
SRP54-202ENST00000546080 HCG22E2RYF7 251 aa9.13□□□□□ -0.95
SRP54-202ENST00000546080 UBE2BP63146 152 aa9.12□□□□□ -0.95
SRP54-202ENST00000546080 NSD1Q96L73 2696 aaPredicted RBP9.12□□□□□ -0.95
SRP54-202ENST00000546080 F8P00451 2351 aa9.11□□□□□ -0.95
SRP54-202ENST00000546080 TEP1Q99973 2627 aaKnown RBP9.11□□□□□ -0.95
SRP54-202ENST00000546080 V9GYY9 64 aa9.11□□□□□ -0.95
SRP54-202ENST00000546080 PSCAO43653 123 aa9.1□□□□□ -0.95
SRP54-202ENST00000546080 CYP4F30PQ9H0H9 118 aa9.1□□□□□ -0.95
SRP54-202ENST00000546080 LINC00476Q8WZB0 136 aa9.09□□□□□ -0.95
SRP54-202ENST00000546080 PRR4Q16378 134 aa9.09□□□□□ -0.95
SRP54-202ENST00000546080 MRPL55Q7Z7F7 128 aaKnown RBP9.08□□□□□ -0.96
SRP54-202ENST00000546080 PRR15Q8IV56 129 aa9.08□□□□□ -0.96
SRP54-202ENST00000546080 NDUFB1O75438 58 aa9.07□□□□□ -0.96
SRP54-202ENST00000546080 KRTAP7-1Q8IUC3 87 aa9.07□□□□□ -0.96
SRP54-202ENST00000546080 DEFB131BA0A096LNP1 70 aa9.06□□□□□ -0.96
SRP54-202ENST00000546080 PSPHP1O15172 72 aa9.06□□□□□ -0.96
SRP54-202ENST00000546080 DNAH10OSP0CZ25 163 aa9.06□□□□□ -0.96
SRP54-202ENST00000546080 TRAV22A0A0B4J277 110 aa9.05□□□□□ -0.96
SRP54-202ENST00000546080 INAFM1C9JVW0 142 aa9.05□□□□□ -0.96
SRP54-202ENST00000546080 MP68P56378 58 aa9.05□□□□□ -0.96
SRP54-202ENST00000546080 DEFB116Q30KQ4 102 aa9.05□□□□□ -0.96
SRP54-202ENST00000546080 REG3GQ6UW15 175 aa9.05□□□□□ -0.96
SRP54-202ENST00000546080 WFDC13Q8IUB5 93 aa9.05□□□□□ -0.96
SRP54-202ENST00000546080 A0A0G2JQZ4 141 aa9.03□□□□□ -0.96
SRP54-202ENST00000546080 A0A1W2PNN7 141 aa9.03□□□□□ -0.96
SRP54-202ENST00000546080 IGFL1Q6UW32 110 aa9.03□□□□□ -0.96
SRP54-202ENST00000546080 CASC10Q5T4H9 136 aa9.03□□□□□ -0.96
SRP54-202ENST00000546080 PRB2P02812 416 aaPredicted RBP9.01□□□□□ -0.97
SRP54-202ENST00000546080 C11orf45Q8TAV5 145 aa9.01□□□□□ -0.97
SRP54-202ENST00000546080 A0A087WSZ3 146 aa9□□□□□ -0.97
SRP54-202ENST00000546080 OXLD1Q5BKU9 147 aa8.99□□□□□ -0.97
SRP54-202ENST00000546080 LINC00208Q96KT6 92 aa8.99□□□□□ -0.97
SRP54-202ENST00000546080 B9D2Q9BPU9 175 aa8.99□□□□□ -0.97
SRP54-202ENST00000546080 SEC61GP60059 68 aa8.97□□□□□ -0.97
SRP54-202ENST00000546080 KRTAP10-11P60412 298 aa8.97□□□□□ -0.97
SRP54-202ENST00000546080 RPL37AP61513 92 aaKnown RBP8.97□□□□□ -0.97
SRP54-202ENST00000546080 TENM1Q9UKZ4 2725 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms