RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 SPRR1AP35321 89 aa7.23□□□□□ -1.25
USP28-212ENST00000544750 SPAG11AQ6PDA7 123 aa7.23□□□□□ -1.25
USP28-212ENST00000544750 TRBV10-3A0A0K0K1G6 114 aa7.22□□□□□ -1.25
USP28-212ENST00000544750 KRTAP4-16G5E9R7 235 aaPredicted RBP7.22□□□□□ -1.25
USP28-212ENST00000544750 PRYO14603 147 aa7.22□□□□□ -1.25
USP28-212ENST00000544750 ANKRD39Q53RE8 183 aa7.22□□□□□ -1.25
USP28-212ENST00000544750 ATOH7Q8N100 152 aa7.22□□□□□ -1.25
USP28-212ENST00000544750 LINC00337Q8N6G1 96 aa7.22□□□□□ -1.25
USP28-212ENST00000544750 HIST1H2BLQ99880 126 aa7.22□□□□□ -1.25
USP28-212ENST00000544750 KCNQ1DNQ9H478 68 aa7.22□□□□□ -1.25
USP28-212ENST00000544750 ZNF815PA8K554 130 aa7.21□□□□□ -1.26
USP28-212ENST00000544750 NPC2P61916 151 aa7.21□□□□□ -1.26
USP28-212ENST00000544750 TRBV10-2A0A0K0K1G8 114 aa7.2□□□□□ -1.26
USP28-212ENST00000544750 C20orf202A1L168 122 aa7.2□□□□□ -1.26
USP28-212ENST00000544750 TIMM17BO60830 172 aa7.2□□□□□ -1.26
USP28-212ENST00000544750 NDUFC2O95298 119 aa7.2□□□□□ -1.26
USP28-212ENST00000544750 SEC61BP60468 96 aaKnown RBP7.2□□□□□ -1.26
USP28-212ENST00000544750 KRTAP19-2Q3LHN2 52 aa7.2□□□□□ -1.26
USP28-212ENST00000544750 SPANXB1Q9NS25 103 aaPredicted RBP7.2□□□□□ -1.26
USP28-212ENST00000544750 LINC00308Q8TCZ7 52 aa7.19□□□□□ -1.26
USP28-212ENST00000544750 MIEN1Q9BRT3 115 aa7.19□□□□□ -1.26
USP28-212ENST00000544750 IGLV6-57P01721 117 aa7.18□□□□□ -1.26
USP28-212ENST00000544750 DDTP30046 118 aa7.17□□□□□ -1.26
USP28-212ENST00000544750 SPRR4Q96PI1 79 aa7.17□□□□□ -1.26
USP28-212ENST00000544750 HIGD2AQ9BW72 106 aa7.17□□□□□ -1.26
USP28-212ENST00000544750 S100A2P29034 98 aa7.16□□□□□ -1.26
USP28-212ENST00000544750 PCP2Q8IVA1 136 aa7.16□□□□□ -1.26
USP28-212ENST00000544750 B5MCH6 92 aa7.15□□□□□ -1.26
USP28-212ENST00000544750 S100A6P06703 90 aa7.15□□□□□ -1.26
USP28-212ENST00000544750 SNRPEP62304 92 aaKnown RBP7.15□□□□□ -1.26
USP28-212ENST00000544750 SMCR5Q8TEV8 140 aa7.15□□□□□ -1.26
USP28-212ENST00000544750 SPANXDQ9BXN6 97 aa7.15□□□□□ -1.26
USP28-212ENST00000544750 SPANXCQ9NY87 97 aa7.15□□□□□ -1.26
USP28-212ENST00000544750 ETDCA0A1B0GVM5 59 aa7.14□□□□□ -1.27
USP28-212ENST00000544750 C5orf52A6NGY3 159 aa7.14□□□□□ -1.27
USP28-212ENST00000544750 AKR1D1P51857 326 aa7.14□□□□□ -1.27
USP28-212ENST00000544750 MT1HP80294 61 aa7.14□□□□□ -1.27
USP28-212ENST00000544750 Q8NBF4 154 aa7.14□□□□□ -1.27
USP28-212ENST00000544750 C4orf48Q5BLP8 95 aa7.13□□□□□ -1.27
USP28-212ENST00000544750 XP32Q5T750 250 aa7.13□□□□□ -1.27
USP28-212ENST00000544750 Q9BRP9 147 aa7.13□□□□□ -1.27
USP28-212ENST00000544750 TRAV23DV6A0A075B6W5 121 aa7.12□□□□□ -1.27
USP28-212ENST00000544750 SPINK1P00995 79 aa7.12□□□□□ -1.27
USP28-212ENST00000544750 S100A7L2Q5SY68 101 aa7.12□□□□□ -1.27
USP28-212ENST00000544750 SCGB1D4Q6XE38 83 aa7.12□□□□□ -1.27
USP28-212ENST00000544750 Q6ZRX8 168 aa7.12□□□□□ -1.27
USP28-212ENST00000544750 ERC2-IT1O76042 136 aa7.11□□□□□ -1.27
USP28-212ENST00000544750 LORP23490 312 aaPredicted RBP7.11□□□□□ -1.27
USP28-212ENST00000544750 LCE2BO14633 110 aa7.1□□□□□ -1.27
USP28-212ENST00000544750 ZNF73O43830 326 aaPredicted RBP7.1□□□□□ -1.27
USP28-212ENST00000544750 S100A12P80511 92 aa7.1□□□□□ -1.27
USP28-212ENST00000544750 Q8N377 158 aa7.09□□□□□ -1.27
USP28-212ENST00000544750 CFC1BP0CG36 223 aa7.08□□□□□ -1.28
USP28-212ENST00000544750 RPS29P62273 56 aaKnown RBP7.08□□□□□ -1.28
USP28-212ENST00000544750 LINC00483Q53H64 154 aa7.08□□□□□ -1.28
USP28-212ENST00000544750 ZNF706Q9Y5V0 76 aaPredicted RBP7.08□□□□□ -1.28
USP28-212ENST00000544750 IFITM1P13164 125 aa7.07□□□□□ -1.28
USP28-212ENST00000544750 Q6ZVH6 145 aa7.07□□□□□ -1.28
USP28-212ENST00000544750 MUSTN1Q8IVN3 82 aa7.07□□□□□ -1.28
USP28-212ENST00000544750 KRTAP10-6P60371 365 aaPredicted RBP7.06□□□□□ -1.28
USP28-212ENST00000544750 LINC00518Q8N0U6 118 aa7.06□□□□□ -1.28
USP28-212ENST00000544750 OR13C6PQ8NH95 151 aa7.06□□□□□ -1.28
USP28-212ENST00000544750 HSBP1L1C9JCN9 74 aa7.05□□□□□ -1.28
USP28-212ENST00000544750 SCGB1D1O95968 90 aa7.05□□□□□ -1.28
USP28-212ENST00000544750 FLGP20930 4061 aaPredicted RBP7.05□□□□□ -1.28
USP28-212ENST00000544750 JOSD1Q15040 202 aaPredicted RBP7.04□□□□□ -1.28
USP28-212ENST00000544750 GAGE2AQ6NT46 116 aa7.04□□□□□ -1.28
USP28-212ENST00000544750 COPS9Q8WXC6 57 aa7.04□□□□□ -1.28
USP28-212ENST00000544750 CBY1Q9Y3M2 126 aa7.04□□□□□ -1.28
USP28-212ENST00000544750 ELOF1P60002 83 aaKnown RBP7.02□□□□□ -1.29
USP28-212ENST00000544750 C6orf99Q4VX62 202 aa7.02□□□□□ -1.29
USP28-212ENST00000544750 ST20-AS1Q8NBB2 130 aa7.02□□□□□ -1.29
USP28-212ENST00000544750 SLC25A20O43772 301 aa7.01□□□□□ -1.29
USP28-212ENST00000544750 COX8AP10176 69 aa7.01□□□□□ -1.29
USP28-212ENST00000544750 SSBP3-AS1Q7Z2R9 100 aa7.01□□□□□ -1.29
USP28-212ENST00000544750 COX7BP24311 80 aa7□□□□□ -1.29
USP28-212ENST00000544750 HINT1P49773 126 aaPredicted RBP7□□□□□ -1.29
USP28-212ENST00000544750 A6NDN8 102 aa6.99□□□□□ -1.29
USP28-212ENST00000544750 MOBPQ13875 183 aa6.99□□□□□ -1.29
USP28-212ENST00000544750 TRBV7-6A0A0J9YX20 115 aa6.98□□□□□ -1.29
USP28-212ENST00000544750 A4D1N5 150 aa6.98□□□□□ -1.29
USP28-212ENST00000544750 DLEU1O43261 78 aa6.98□□□□□ -1.29
USP28-212ENST00000544750 SPRR1BP22528 89 aa6.98□□□□□ -1.29
USP28-212ENST00000544750 PCOTHQ58A44 107 aa6.98□□□□□ -1.29
USP28-212ENST00000544750 DHRS4-AS1Q9P1J3 65 aa6.98□□□□□ -1.29
USP28-212ENST00000544750 IGLV8-61A0A075B6I0 122 aa6.97□□□□□ -1.29
USP28-212ENST00000544750 IGLV9-49A0A0B4J1Y8 123 aa6.97□□□□□ -1.29
USP28-212ENST00000544750 TRAV13-2A0A0B4J235 113 aa6.97□□□□□ -1.29
USP28-212ENST00000544750 KRTAP9-7A8MTY7 169 aa6.97□□□□□ -1.29
USP28-212ENST00000544750 SPATA45Q537H7 98 aa6.97□□□□□ -1.29
USP28-212ENST00000544750 SMIM11BQ8TCY0 68 aa6.97□□□□□ -1.29
USP28-212ENST00000544750 PAM16Q9Y3D7 125 aa6.97□□□□□ -1.29
USP28-212ENST00000544750 A0A1B0GWB2 263 aa6.96□□□□□ -1.3
USP28-212ENST00000544750 C14orf144Q96I85 54 aa6.96□□□□□ -1.3
USP28-212ENST00000544750 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.95□□□□□ -1.3
USP28-212ENST00000544750 C2orf91Q6ZV80 131 aa6.95□□□□□ -1.3
USP28-212ENST00000544750 PYY3Q5JQD4 70 aa6.94□□□□□ -1.3
USP28-212ENST00000544750 HIST1H4GQ99525 98 aa6.94□□□□□ -1.3
USP28-212ENST00000544750 VAMP8Q9BV40 100 aa6.94□□□□□ -1.3
USP28-212ENST00000544750 C12orf57Q99622 126 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms