RNA–Protein interactions for RNA: ENST00000544454.5

LTBR-213, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-213ENST00000544454 KRTAP4-16G5E9R7 235 aaPredicted RBP8.2□□□□□ -1.1
LTBR-213ENST00000544454 JOSD1Q15040 202 aaPredicted RBP8.2□□□□□ -1.1
LTBR-213ENST00000544454 CBY1Q9Y3M2 126 aa8.2□□□□□ -1.1
LTBR-213ENST00000544454 ETDCA0A1B0GVM5 59 aa8.19□□□□□ -1.1
LTBR-213ENST00000544454 PRR26Q8N8Z3 221 aa8.19□□□□□ -1.1
LTBR-213ENST00000544454 RPL13AP40429 203 aaKnown RBP8.18□□□□□ -1.1
LTBR-213ENST00000544454 MUSTN1Q8IVN3 82 aa8.18□□□□□ -1.1
LTBR-213ENST00000544454 TRAV23DV6A0A075B6W5 121 aa8.17□□□□□ -1.1
LTBR-213ENST00000544454 OR13C6PQ8NH95 151 aa8.17□□□□□ -1.1
LTBR-213ENST00000544454 HIGD2AQ9BW72 106 aa8.17□□□□□ -1.1
LTBR-213ENST00000544454 TMA7Q9Y2S6 64 aaKnown RBP8.17□□□□□ -1.1
LTBR-213ENST00000544454 B5MCH6 92 aa8.16□□□□□ -1.1
LTBR-213ENST00000544454 DLEU1O43261 78 aa8.16□□□□□ -1.1
LTBR-213ENST00000544454 COX8AP10176 69 aa8.16□□□□□ -1.1
LTBR-213ENST00000544454 ZNF73O43830 326 aaPredicted RBP8.15□□□□□ -1.1
LTBR-213ENST00000544454 CRYGAP11844 174 aa8.14□□□□□ -1.11
LTBR-213ENST00000544454 FAM229BQ4G0N7 80 aa8.14□□□□□ -1.11
LTBR-213ENST00000544454 SMCR5Q8TEV8 140 aa8.14□□□□□ -1.11
LTBR-213ENST00000544454 VAMP8Q9BV40 100 aa8.14□□□□□ -1.11
LTBR-213ENST00000544454 HINT1P49773 126 aaPredicted RBP8.13□□□□□ -1.11
LTBR-213ENST00000544454 SPATA45Q537H7 98 aa8.13□□□□□ -1.11
LTBR-213ENST00000544454 Q6ZRX8 168 aa8.13□□□□□ -1.11
LTBR-213ENST00000544454 ANAPC11Q9NYG5 84 aa8.13□□□□□ -1.11
LTBR-213ENST00000544454 PAM16Q9Y3D7 125 aa8.13□□□□□ -1.11
LTBR-213ENST00000544454 ZNF706Q9Y5V0 76 aaPredicted RBP8.13□□□□□ -1.11
LTBR-213ENST00000544454 A0A087X002 238 aa8.12□□□□□ -1.11
LTBR-213ENST00000544454 HMCN2Q8NDA2 5059 aa8.11□□□□□ -1.11
LTBR-213ENST00000544454 C14orf144Q96I85 54 aa8.11□□□□□ -1.11
LTBR-213ENST00000544454 SPRR4Q96PI1 79 aa8.11□□□□□ -1.11
LTBR-213ENST00000544454 TRAV13-2A0A0B4J235 113 aa8.1□□□□□ -1.11
LTBR-213ENST00000544454 A6NDN8 102 aa8.1□□□□□ -1.11
LTBR-213ENST00000544454 PYY3Q5JQD4 70 aa8.1□□□□□ -1.11
LTBR-213ENST00000544454 Q9BRP9 147 aa8.1□□□□□ -1.11
LTBR-213ENST00000544454 SLC25A34Q6PIV7 304 aa8.09□□□□□ -1.11
LTBR-213ENST00000544454 TYMSOSQ8TAI1 123 aa8.09□□□□□ -1.11
LTBR-213ENST00000544454 HIST1H4GQ99525 98 aa8.09□□□□□ -1.11
LTBR-213ENST00000544454 ERC2-IT1O76042 136 aa8.08□□□□□ -1.12
LTBR-213ENST00000544454 HIGD1BQ9P298 99 aa8.08□□□□□ -1.12
LTBR-213ENST00000544454 TRBV7-6A0A0J9YX20 115 aa8.07□□□□□ -1.12
LTBR-213ENST00000544454 A4D1N5 150 aa8.07□□□□□ -1.12
LTBR-213ENST00000544454 C6orf99Q4VX62 202 aa8.07□□□□□ -1.12
LTBR-213ENST00000544454 KRTAP13-2Q52LG2 175 aa8.07□□□□□ -1.12
LTBR-213ENST00000544454 LINC00483Q53H64 154 aa8.06□□□□□ -1.12
LTBR-213ENST00000544454 DHRS4-AS1Q9P1J3 65 aa8.06□□□□□ -1.12
LTBR-213ENST00000544454 COX7BP24311 80 aa8.05□□□□□ -1.12
LTBR-213ENST00000544454 ELOF1P60002 83 aaKnown RBP8.05□□□□□ -1.12
LTBR-213ENST00000544454 GAGE2AQ6NT46 116 aa8.04□□□□□ -1.12
LTBR-213ENST00000544454 C2orf91Q6ZV80 131 aa8.03□□□□□ -1.12
LTBR-213ENST00000544454 SMIM11BQ8TCY0 68 aa8.03□□□□□ -1.12
LTBR-213ENST00000544454 A0A1B0GWB2 263 aa8.02□□□□□ -1.13
LTBR-213ENST00000544454 TAL2Q16559 108 aa8.01□□□□□ -1.13
LTBR-213ENST00000544454 C3orf22Q8N5N4 141 aa8.01□□□□□ -1.13
LTBR-213ENST00000544454 ST20-AS1Q8NBB2 130 aa8□□□□□ -1.13
LTBR-213ENST00000544454 CTAG1AP78358 180 aa7.99□□□□□ -1.13
LTBR-213ENST00000544454 VAMP3Q15836 100 aa7.99□□□□□ -1.13
LTBR-213ENST00000544454 LINC00304Q8N9R0 145 aa7.99□□□□□ -1.13
LTBR-213ENST00000544454 CFC1BP0CG36 223 aa7.98□□□□□ -1.13
LTBR-213ENST00000544454 CFC1P0CG37 223 aa7.98□□□□□ -1.13
LTBR-213ENST00000544454 C12orf57Q99622 126 aa7.98□□□□□ -1.13
LTBR-213ENST00000544454 TSPAN13O95857 204 aa7.97□□□□□ -1.13
LTBR-213ENST00000544454 SPRR1BP22528 89 aa7.97□□□□□ -1.13
LTBR-213ENST00000544454 SPAG11AQ6PDA7 123 aa7.97□□□□□ -1.13
LTBR-213ENST00000544454 CEND1Q8N111 149 aa7.97□□□□□ -1.13
LTBR-213ENST00000544454 SSBP3-AS1Q7Z2R9 100 aa7.96□□□□□ -1.14
LTBR-213ENST00000544454 NHP2Q9NX24 153 aaKnown RBP7.96□□□□□ -1.14
LTBR-213ENST00000544454 UQCR10Q9UDW1 63 aa7.96□□□□□ -1.14
LTBR-213ENST00000544454 A0A0B4J2C4 111 aa7.95□□□□□ -1.14
LTBR-213ENST00000544454 TMEM238LA0A1B0GVL6 79 aa7.95□□□□□ -1.14
LTBR-213ENST00000544454 A6NJY4 79 aa7.95□□□□□ -1.14
LTBR-213ENST00000544454 RAB37Q96AX2 223 aa7.95□□□□□ -1.14
LTBR-213ENST00000544454 IGLV9-49A0A0B4J1Y8 123 aa7.94□□□□□ -1.14
LTBR-213ENST00000544454 SLC25A20O43772 301 aa7.94□□□□□ -1.14
LTBR-213ENST00000544454 SMCPP49901 116 aaPredicted RBP7.94□□□□□ -1.14
LTBR-213ENST00000544454 C4orf48Q5BLP8 95 aa7.94□□□□□ -1.14
LTBR-213ENST00000544454 Q8NBF4 154 aa7.94□□□□□ -1.14
LTBR-213ENST00000544454 TEX49A0A1B0GTD5 131 aa7.93□□□□□ -1.14
LTBR-213ENST00000544454 HSD52Q0P140 79 aa7.93□□□□□ -1.14
LTBR-213ENST00000544454 MOBPQ13875 183 aa7.93□□□□□ -1.14
LTBR-213ENST00000544454 BVES-AS1Q5T3Y7 98 aa7.93□□□□□ -1.14
LTBR-213ENST00000544454 LINC00575Q6W349 94 aa7.93□□□□□ -1.14
LTBR-213ENST00000544454 DEFB105AQ8NG35 78 aa7.92□□□□□ -1.14
LTBR-213ENST00000544454 LAMTOR3Q9UHA4 124 aa7.92□□□□□ -1.14
LTBR-213ENST00000544454 IGLV5-48A0A075B6I7 105 aa7.91□□□□□ -1.14
LTBR-213ENST00000544454 H7C2G1 150 aa7.91□□□□□ -1.14
LTBR-213ENST00000544454 FXYD2P54710 66 aa7.91□□□□□ -1.14
LTBR-213ENST00000544454 PRO1854Q9UHT4 67 aa7.91□□□□□ -1.14
LTBR-213ENST00000544454 hADV29S1A0JD25 119 aa7.9□□□□□ -1.14
LTBR-213ENST00000544454 SPINK1P00995 79 aa7.9□□□□□ -1.14
LTBR-213ENST00000544454 LRP2P98164 4655 aa7.9□□□□□ -1.15
LTBR-213ENST00000544454 SMIM6P0DI80 62 aa7.89□□□□□ -1.15
LTBR-213ENST00000544454 LINC01547P58512 204 aaPredicted RBP7.89□□□□□ -1.15
LTBR-213ENST00000544454 C9orf153Q5TBE3 101 aa7.89□□□□□ -1.15
LTBR-213ENST00000544454 UBR4Q5T4S7 5183 aa7.88□□□□□ -1.15
LTBR-213ENST00000544454 PRR4Q16378 134 aa7.88□□□□□ -1.15
LTBR-213ENST00000544454 H0YGX0 51 aa7.87□□□□□ -1.15
LTBR-213ENST00000544454 SMIM29Q86T20 159 aa7.87□□□□□ -1.15
LTBR-213ENST00000544454 Q8N377 158 aa7.87□□□□□ -1.15
LTBR-213ENST00000544454 Q1RN00 199 aa7.86□□□□□ -1.15
LTBR-213ENST00000544454 SNCGO76070 127 aa7.85□□□□□ -1.15
LTBR-213ENST00000544454 RPS29P62273 56 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms