RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 LINC00518Q8N0U6 118 aa11.36□□□□□ -0.59
DDX55-211ENST00000544429 TRAV23DV6A0A075B6W5 121 aa11.35□□□□□ -0.59
DDX55-211ENST00000544429 DLEU1O43261 78 aa11.35□□□□□ -0.59
DDX55-211ENST00000544429 MUSTN1Q8IVN3 82 aa11.35□□□□□ -0.59
DDX55-211ENST00000544429 TMA7Q9Y2S6 64 aaKnown RBP11.35□□□□□ -0.59
DDX55-211ENST00000544429 A0A087X002 238 aa11.34□□□□□ -0.59
DDX55-211ENST00000544429 ETDCA0A1B0GVM5 59 aa11.34□□□□□ -0.59
DDX55-211ENST00000544429 HIGD2AQ9BW72 106 aa11.34□□□□□ -0.59
DDX55-211ENST00000544429 RPL13AP40429 203 aaKnown RBP11.33□□□□□ -0.6
DDX55-211ENST00000544429 Q6ZRX8 168 aa11.33□□□□□ -0.6
DDX55-211ENST00000544429 SMCR5Q8TEV8 140 aa11.33□□□□□ -0.6
DDX55-211ENST00000544429 ZNF73O43830 326 aaPredicted RBP11.32□□□□□ -0.6
DDX55-211ENST00000544429 FAM229BQ4G0N7 80 aa11.32□□□□□ -0.6
DDX55-211ENST00000544429 PYY3Q5JQD4 70 aa11.31□□□□□ -0.6
DDX55-211ENST00000544429 Q9BRP9 147 aa11.31□□□□□ -0.6
DDX55-211ENST00000544429 PAM16Q9Y3D7 125 aa11.31□□□□□ -0.6
DDX55-211ENST00000544429 CBY1Q9Y3M2 126 aa11.31□□□□□ -0.6
DDX55-211ENST00000544429 ANAPC11Q9NYG5 84 aa11.3□□□□□ -0.6
DDX55-211ENST00000544429 CRYGAP11844 174 aa11.29□□□□□ -0.6
DDX55-211ENST00000544429 SPATA45Q537H7 98 aa11.29□□□□□ -0.6
DDX55-211ENST00000544429 OR13C6PQ8NH95 151 aa11.29□□□□□ -0.6
DDX55-211ENST00000544429 SPRR4Q96PI1 79 aa11.29□□□□□ -0.6
DDX55-211ENST00000544429 VAMP8Q9BV40 100 aa11.29□□□□□ -0.6
DDX55-211ENST00000544429 KRTAP13-2Q52LG2 175 aa11.28□□□□□ -0.6
DDX55-211ENST00000544429 C14orf144Q96I85 54 aa11.27□□□□□ -0.61
DDX55-211ENST00000544429 ERC2-IT1O76042 136 aa11.26□□□□□ -0.61
DDX55-211ENST00000544429 HMCN2Q8NDA2 5059 aa11.26□□□□□ -0.61
DDX55-211ENST00000544429 HIGD1BQ9P298 99 aa11.25□□□□□ -0.61
DDX55-211ENST00000544429 ZNF706Q9Y5V0 76 aaPredicted RBP11.25□□□□□ -0.61
DDX55-211ENST00000544429 A4D1N5 150 aa11.23□□□□□ -0.61
DDX55-211ENST00000544429 LINC00483Q53H64 154 aa11.23□□□□□ -0.61
DDX55-211ENST00000544429 C2orf91Q6ZV80 131 aa11.23□□□□□ -0.61
DDX55-211ENST00000544429 TRAV13-2A0A0B4J235 113 aa11.22□□□□□ -0.61
DDX55-211ENST00000544429 SLC25A34Q6PIV7 304 aa11.22□□□□□ -0.61
DDX55-211ENST00000544429 TRBV7-6A0A0J9YX20 115 aa11.21□□□□□ -0.61
DDX55-211ENST00000544429 A6NDN8 102 aa11.21□□□□□ -0.61
DDX55-211ENST00000544429 ELOF1P60002 83 aaKnown RBP11.21□□□□□ -0.61
DDX55-211ENST00000544429 C6orf99Q4VX62 202 aa11.21□□□□□ -0.61
DDX55-211ENST00000544429 TYMSOSQ8TAI1 123 aa11.21□□□□□ -0.61
DDX55-211ENST00000544429 HINT1P49773 126 aaPredicted RBP11.2□□□□□ -0.62
DDX55-211ENST00000544429 HIST1H4GQ99525 98 aa11.2□□□□□ -0.62
DDX55-211ENST00000544429 C3orf22Q8N5N4 141 aa11.17□□□□□ -0.62
DDX55-211ENST00000544429 SMIM11BQ8TCY0 68 aa11.17□□□□□ -0.62
DDX55-211ENST00000544429 DHRS4-AS1Q9P1J3 65 aa11.17□□□□□ -0.62
DDX55-211ENST00000544429 COX7BP24311 80 aa11.16□□□□□ -0.62
DDX55-211ENST00000544429 A0A1B0GWB2 263 aa11.14□□□□□ -0.63
DDX55-211ENST00000544429 GAGE2AQ6NT46 116 aa11.14□□□□□ -0.63
DDX55-211ENST00000544429 TAL2Q16559 108 aa11.13□□□□□ -0.63
DDX55-211ENST00000544429 ST20-AS1Q8NBB2 130 aa11.13□□□□□ -0.63
DDX55-211ENST00000544429 SPRR1BP22528 89 aa11.11□□□□□ -0.63
DDX55-211ENST00000544429 CFC1BP0CG36 223 aa11.1□□□□□ -0.63
DDX55-211ENST00000544429 CFC1P0CG37 223 aa11.1□□□□□ -0.63
DDX55-211ENST00000544429 CTAG1AP78358 180 aa11.1□□□□□ -0.63
DDX55-211ENST00000544429 C12orf57Q99622 126 aa11.1□□□□□ -0.63
DDX55-211ENST00000544429 CEND1Q8N111 149 aa11.09□□□□□ -0.63
DDX55-211ENST00000544429 LINC00304Q8N9R0 145 aa11.09□□□□□ -0.63
DDX55-211ENST00000544429 A0A0B4J2C4 111 aa11.07□□□□□ -0.64
DDX55-211ENST00000544429 TSPAN13O95857 204 aa11.04□□□□□ -0.64
DDX55-211ENST00000544429 FXYD2P54710 66 aa11.04□□□□□ -0.64
DDX55-211ENST00000544429 LINC01547P58512 204 aaPredicted RBP11.04□□□□□ -0.64
DDX55-211ENST00000544429 UQCR10Q9UDW1 63 aa11.04□□□□□ -0.64
DDX55-211ENST00000544429 IGLV5-48A0A075B6I7 105 aa11.03□□□□□ -0.64
DDX55-211ENST00000544429 SPAG11AQ6PDA7 123 aa11.03□□□□□ -0.64
DDX55-211ENST00000544429 SSBP3-AS1Q7Z2R9 100 aa11.03□□□□□ -0.64
DDX55-211ENST00000544429 Q8NBF4 154 aa11.03□□□□□ -0.64
DDX55-211ENST00000544429 HSD52Q0P140 79 aa11.02□□□□□ -0.65
DDX55-211ENST00000544429 MOBPQ13875 183 aa11.02□□□□□ -0.65
DDX55-211ENST00000544429 VAMP3Q15836 100 aa11.02□□□□□ -0.65
DDX55-211ENST00000544429 LINC00575Q6W349 94 aa11.02□□□□□ -0.65
DDX55-211ENST00000544429 IGLV9-49A0A0B4J1Y8 123 aa11.01□□□□□ -0.65
DDX55-211ENST00000544429 NHP2Q9NX24 153 aaKnown RBP11.01□□□□□ -0.65
DDX55-211ENST00000544429 TMEM238LA0A1B0GVL6 79 aa11□□□□□ -0.65
DDX55-211ENST00000544429 A6NJY4 79 aa11□□□□□ -0.65
DDX55-211ENST00000544429 RAB37Q96AX2 223 aa11□□□□□ -0.65
DDX55-211ENST00000544429 LRP2P98164 4655 aa11□□□□□ -0.65
DDX55-211ENST00000544429 TEX49A0A1B0GTD5 131 aa10.99□□□□□ -0.65
DDX55-211ENST00000544429 SMIM6P0DI80 62 aa10.99□□□□□ -0.65
DDX55-211ENST00000544429 BVES-AS1Q5T3Y7 98 aa10.99□□□□□ -0.65
DDX55-211ENST00000544429 SMIM29Q86T20 159 aa10.98□□□□□ -0.65
DDX55-211ENST00000544429 PRO1854Q9UHT4 67 aa10.98□□□□□ -0.65
DDX55-211ENST00000544429 SLC25A20O43772 301 aa10.96□□□□□ -0.65
DDX55-211ENST00000544429 DEFB105AQ8NG35 78 aa10.96□□□□□ -0.65
DDX55-211ENST00000544429 LOC105371267A0A1B0GV96 52 aa10.95□□□□□ -0.66
DDX55-211ENST00000544429 hADV29S1A0JD25 119 aa10.95□□□□□ -0.66
DDX55-211ENST00000544429 SPINK1P00995 79 aa10.95□□□□□ -0.66
DDX55-211ENST00000544429 Q8N377 158 aa10.95□□□□□ -0.66
DDX55-211ENST00000544429 LAMTOR3Q9UHA4 124 aa10.95□□□□□ -0.66
DDX55-211ENST00000544429 LPAP08519 4548 aa10.95□□□□□ -0.66
DDX55-211ENST00000544429 H7C2G1 150 aa10.94□□□□□ -0.66
DDX55-211ENST00000544429 RPS29P62273 56 aaKnown RBP10.94□□□□□ -0.66
DDX55-211ENST00000544429 C4orf48Q5BLP8 95 aa10.93□□□□□ -0.66
DDX55-211ENST00000544429 C9orf153Q5TBE3 101 aa10.93□□□□□ -0.66
DDX55-211ENST00000544429 PRR4Q16378 134 aa10.91□□□□□ -0.66
DDX55-211ENST00000544429 Q1RN00 199 aa10.91□□□□□ -0.66
DDX55-211ENST00000544429 Q6ZQY7 126 aa10.91□□□□□ -0.66
DDX55-211ENST00000544429 PRO1933Q9H354 126 aa10.91□□□□□ -0.66
DDX55-211ENST00000544429 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.9□□□□□ -0.66
DDX55-211ENST00000544429 H0YGX0 51 aa10.89□□□□□ -0.67
DDX55-211ENST00000544429 RETNLBQ9BQ08 111 aa10.89□□□□□ -0.67
DDX55-211ENST00000544429 K7ERJ3 54 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms