RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 CBY1Q9Y3M2 126 aa10.33□□□□□ -0.76
RABGGTA-203ENST00000543002 TRAV23DV6A0A075B6W5 121 aa10.33□□□□□ -0.76
RABGGTA-203ENST00000543002 HIST1H4GQ99525 98 aa10.33□□□□□ -0.76
RABGGTA-203ENST00000543002 ETDCA0A1B0GVM5 59 aa10.32□□□□□ -0.76
RABGGTA-203ENST00000543002 C2orf91Q6ZV80 131 aa10.32□□□□□ -0.76
RABGGTA-203ENST00000543002 LINC01600Q96MT4 127 aa10.32□□□□□ -0.76
RABGGTA-203ENST00000543002 J3QL48 77 aa10.31□□□□□ -0.76
RABGGTA-203ENST00000543002 LRP1Q07954 4544 aaKnown RBP10.3□□□□□ -0.76
RABGGTA-203ENST00000543002 A4D1N5 150 aa10.29□□□□□ -0.76
RABGGTA-203ENST00000543002 ZNF73O43830 326 aaPredicted RBP10.29□□□□□ -0.76
RABGGTA-203ENST00000543002 B5MCH6 92 aa10.28□□□□□ -0.76
RABGGTA-203ENST00000543002 KRTAP1-4P0C5Y4 121 aa10.28□□□□□ -0.76
RABGGTA-203ENST00000543002 DMBT1Q9UGM3 2413 aaPredicted RBP10.27□□□□□ -0.77
RABGGTA-203ENST00000543002 FAT3Q8TDW7 4589 aa10.27□□□□□ -0.77
RABGGTA-203ENST00000543002 TRAV13-2A0A0B4J235 113 aa10.27□□□□□ -0.77
RABGGTA-203ENST00000543002 A6NDN8 102 aa10.27□□□□□ -0.77
RABGGTA-203ENST00000543002 MT1HL1P0DM35 61 aa10.27□□□□□ -0.77
RABGGTA-203ENST00000543002 HIGD2AQ9BW72 106 aa10.27□□□□□ -0.77
RABGGTA-203ENST00000543002 TAL2Q16559 108 aa10.25□□□□□ -0.77
RABGGTA-203ENST00000543002 Q6ZRX8 168 aa10.25□□□□□ -0.77
RABGGTA-203ENST00000543002 LOC105371267A0A1B0GV96 52 aa10.24□□□□□ -0.77
RABGGTA-203ENST00000543002 SMIM6P0DI80 62 aa10.24□□□□□ -0.77
RABGGTA-203ENST00000543002 HINT1P49773 126 aaPredicted RBP10.24□□□□□ -0.77
RABGGTA-203ENST00000543002 KRTAP10-8P60410 259 aa10.23□□□□□ -0.77
RABGGTA-203ENST00000543002 SMCR5Q8TEV8 140 aa10.23□□□□□ -0.77
RABGGTA-203ENST00000543002 UQCR10Q9UDW1 63 aa10.23□□□□□ -0.77
RABGGTA-203ENST00000543002 C6orf99Q4VX62 202 aa10.22□□□□□ -0.77
RABGGTA-203ENST00000543002 CEND1Q8N111 149 aa10.21□□□□□ -0.78
RABGGTA-203ENST00000543002 PRR26Q8N8Z3 221 aa10.21□□□□□ -0.78
RABGGTA-203ENST00000543002 Q9BRP9 147 aa10.21□□□□□ -0.78
RABGGTA-203ENST00000543002 C12orf57Q99622 126 aa10.2□□□□□ -0.78
RABGGTA-203ENST00000543002 SMIM11BQ8TCY0 68 aa10.19□□□□□ -0.78
RABGGTA-203ENST00000543002 TRBV7-6A0A0J9YX20 115 aa10.18□□□□□ -0.78
RABGGTA-203ENST00000543002 ERC2-IT1O76042 136 aa10.18□□□□□ -0.78
RABGGTA-203ENST00000543002 COX7BP24311 80 aa10.18□□□□□ -0.78
RABGGTA-203ENST00000543002 ELOF1P60002 83 aaKnown RBP10.18□□□□□ -0.78
RABGGTA-203ENST00000543002 SPRR4Q96PI1 79 aa10.18□□□□□ -0.78
RABGGTA-203ENST00000543002 ZNF706Q9Y5V0 76 aaPredicted RBP10.18□□□□□ -0.78
RABGGTA-203ENST00000543002 CFC1BP0CG36 223 aa10.17□□□□□ -0.78
RABGGTA-203ENST00000543002 CFC1P0CG37 223 aa10.17□□□□□ -0.78
RABGGTA-203ENST00000543002 HSD52Q0P140 79 aa10.17□□□□□ -0.78
RABGGTA-203ENST00000543002 ANAPC11Q9NYG5 84 aa10.17□□□□□ -0.78
RABGGTA-203ENST00000543002 RPL13AP40429 203 aaKnown RBP10.16□□□□□ -0.78
RABGGTA-203ENST00000543002 FAM229BQ4G0N7 80 aa10.16□□□□□ -0.78
RABGGTA-203ENST00000543002 A0A087X002 238 aa10.15□□□□□ -0.78
RABGGTA-203ENST00000543002 A0A0B4J2C4 111 aa10.15□□□□□ -0.78
RABGGTA-203ENST00000543002 TMEM238LA0A1B0GVL6 79 aa10.15□□□□□ -0.78
RABGGTA-203ENST00000543002 A0A1B0GWB2 263 aa10.15□□□□□ -0.78
RABGGTA-203ENST00000543002 A6NJY4 79 aa10.15□□□□□ -0.78
RABGGTA-203ENST00000543002 CRYGAP11844 174 aa10.15□□□□□ -0.78
RABGGTA-203ENST00000543002 FXYD2P54710 66 aa10.15□□□□□ -0.78
RABGGTA-203ENST00000543002 PRO1933Q9H354 126 aa10.15□□□□□ -0.78
RABGGTA-203ENST00000543002 DHRS4-AS1Q9P1J3 65 aa10.15□□□□□ -0.78
RABGGTA-203ENST00000543002 RAB37Q96AX2 223 aa10.14□□□□□ -0.79
RABGGTA-203ENST00000543002 VAMP3Q15836 100 aa10.1□□□□□ -0.79
RABGGTA-203ENST00000543002 KRTAP13-2Q52LG2 175 aa10.1□□□□□ -0.79
RABGGTA-203ENST00000543002 LINC00483Q53H64 154 aa10.1□□□□□ -0.79
RABGGTA-203ENST00000543002 GAGE2AQ6NT46 116 aa10.1□□□□□ -0.79
RABGGTA-203ENST00000543002 TNXBP22105 4242 aa10.09□□□□□ -0.79
RABGGTA-203ENST00000543002 H7C2G1 150 aa10.08□□□□□ -0.8
RABGGTA-203ENST00000543002 ST20-AS1Q8NBB2 130 aa10.08□□□□□ -0.8
RABGGTA-203ENST00000543002 TYMSOSQ8TAI1 123 aa10.08□□□□□ -0.8
RABGGTA-203ENST00000543002 PRO1854Q9UHT4 67 aa10.08□□□□□ -0.8
RABGGTA-203ENST00000543002 NHP2Q9NX24 153 aaKnown RBP10.07□□□□□ -0.8
RABGGTA-203ENST00000543002 BVES-AS1Q5T3Y7 98 aa10.06□□□□□ -0.8
RABGGTA-203ENST00000543002 HERC1Q15751 4861 aa10.05□□□□□ -0.8
RABGGTA-203ENST00000543002 TSTD3H0UI37 97 aa10.05□□□□□ -0.8
RABGGTA-203ENST00000543002 LINC00575Q6W349 94 aa10.05□□□□□ -0.8
RABGGTA-203ENST00000543002 C3orf22Q8N5N4 141 aa10.05□□□□□ -0.8
RABGGTA-203ENST00000543002 SLC25A20O43772 301 aa10.04□□□□□ -0.8
RABGGTA-203ENST00000543002 SPRR1BP22528 89 aa10.04□□□□□ -0.8
RABGGTA-203ENST00000543002 Q1RN00 199 aa10.04□□□□□ -0.8
RABGGTA-203ENST00000543002 CTAG1AP78358 180 aa10.03□□□□□ -0.8
RABGGTA-203ENST00000543002 K7ERJ3 54 aa10.02□□□□□ -0.81
RABGGTA-203ENST00000543002 hADV29S1A0JD25 119 aa10□□□□□ -0.81
RABGGTA-203ENST00000543002 IGLV5-48A0A075B6I7 105 aa9.99□□□□□ -0.81
RABGGTA-203ENST00000543002 TEX49A0A1B0GTD5 131 aa9.99□□□□□ -0.81
RABGGTA-203ENST00000543002 H0YGX0 51 aa9.99□□□□□ -0.81
RABGGTA-203ENST00000543002 M0R143 59 aa9.99□□□□□ -0.81
RABGGTA-203ENST00000543002 DEFB105AQ8NG35 78 aa9.99□□□□□ -0.81
RABGGTA-203ENST00000543002 IGLV9-49A0A0B4J1Y8 123 aa9.98□□□□□ -0.81
RABGGTA-203ENST00000543002 LINC01547P58512 204 aaPredicted RBP9.98□□□□□ -0.81
RABGGTA-203ENST00000543002 LINC00304Q8N9R0 145 aa9.98□□□□□ -0.81
RABGGTA-203ENST00000543002 TRIAP1O43715 76 aa9.96□□□□□ -0.82
RABGGTA-203ENST00000543002 MOBPQ13875 183 aa9.96□□□□□ -0.82
RABGGTA-203ENST00000543002 SSBP3-AS1Q7Z2R9 100 aa9.96□□□□□ -0.82
RABGGTA-203ENST00000543002 LAMTOR3Q9UHA4 124 aa9.96□□□□□ -0.82
RABGGTA-203ENST00000543002 TSPAN13O95857 204 aa9.95□□□□□ -0.82
RABGGTA-203ENST00000543002 Q6ZQY7 126 aa9.95□□□□□ -0.82
RABGGTA-203ENST00000543002 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.94□□□□□ -0.82
RABGGTA-203ENST00000543002 Q8N377 158 aa9.94□□□□□ -0.82
RABGGTA-203ENST00000543002 Q8NBF4 154 aa9.94□□□□□ -0.82
RABGGTA-203ENST00000543002 SNCGO76070 127 aa9.93□□□□□ -0.82
RABGGTA-203ENST00000543002 PSMB2P49721 201 aa9.93□□□□□ -0.82
RABGGTA-203ENST00000543002 C9orf153Q5TBE3 101 aa9.93□□□□□ -0.82
RABGGTA-203ENST00000543002 FAM218AQ96MZ4 157 aa9.93□□□□□ -0.82
RABGGTA-203ENST00000543002 SPAG11AQ6PDA7 123 aa9.92□□□□□ -0.82
RABGGTA-203ENST00000543002 SMIM29Q86T20 159 aa9.92□□□□□ -0.82
RABGGTA-203ENST00000543002 A0A1B0GX51 115 aa9.9□□□□□ -0.82
RABGGTA-203ENST00000543002 COX6CP09669 75 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms