RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 TMEM223A0PJW6 202 aa6.18□□□□□ -1.42
COPA-205ENST00000541366 H7C2G1 150 aa6.18□□□□□ -1.42
COPA-205ENST00000541366 CHTOPQ9Y3Y2 248 aaKnown RBP6.17□□□□□ -1.42
COPA-205ENST00000541366 HBDP02042 147 aa6.15□□□□□ -1.42
COPA-205ENST00000541366 CFC1P0CG37 223 aa6.15□□□□□ -1.42
COPA-205ENST00000541366 FABP9Q0Z7S8 132 aa6.15□□□□□ -1.42
COPA-205ENST00000541366 TRBV10-2A0A0K0K1G8 114 aa6.14□□□□□ -1.43
COPA-205ENST00000541366 JOSD1Q15040 202 aaPredicted RBP6.14□□□□□ -1.43
COPA-205ENST00000541366 C1orf195Q5TG92 126 aa6.14□□□□□ -1.43
COPA-205ENST00000541366 MACF1Q9UPN3 7388 aaKnown RBP6.13□□□□□ -1.43
COPA-205ENST00000541366 TRAV23DV6A0A075B6W5 121 aa6.13□□□□□ -1.43
COPA-205ENST00000541366 HERV-K104P63124 156 aa6.13□□□□□ -1.43
COPA-205ENST00000541366 KRTAP4-9Q9BYQ8 210 aa6.13□□□□□ -1.43
COPA-205ENST00000541366 LOC107984156A0A0G2JMH3 177 aa6.12□□□□□ -1.43
COPA-205ENST00000541366 LINC00614P0C842 121 aa6.12□□□□□ -1.43
COPA-205ENST00000541366 SPRR1BP22528 89 aa6.12□□□□□ -1.43
COPA-205ENST00000541366 S100A7L2Q5SY68 101 aa6.12□□□□□ -1.43
COPA-205ENST00000541366 ARL17AQ8IVW1 177 aa6.12□□□□□ -1.43
COPA-205ENST00000541366 C18orf32Q8TCD1 76 aa6.12□□□□□ -1.43
COPA-205ENST00000541366 A0A0G2JQZ4 141 aa6.11□□□□□ -1.43
COPA-205ENST00000541366 ZNF73O43830 326 aaPredicted RBP6.11□□□□□ -1.43
COPA-205ENST00000541366 TSPEAR-AS2P59090 65 aa6.11□□□□□ -1.43
COPA-205ENST00000541366 RPS10P5Q9NQ39 176 aa6.11□□□□□ -1.43
COPA-205ENST00000541366 SPANXB1Q9NS25 103 aaPredicted RBP6.11□□□□□ -1.43
COPA-205ENST00000541366 SYNE2Q8WXH0 6885 aaKnown RBP6.11□□□□□ -1.43
COPA-205ENST00000541366 MYMXA0A1B0GTQ4 84 aa6.1□□□□□ -1.43
COPA-205ENST00000541366 Q1RN00 199 aa6.1□□□□□ -1.43
COPA-205ENST00000541366 MAP1LC3CQ9BXW4 147 aa6.1□□□□□ -1.43
COPA-205ENST00000541366 LINC00587B1AMM8 73 aa6.09□□□□□ -1.43
COPA-205ENST00000541366 LAMTOR3Q9UHA4 124 aa6.09□□□□□ -1.43
COPA-205ENST00000541366 C5orf52A6NGY3 159 aa6.08□□□□□ -1.44
COPA-205ENST00000541366 NPC2P61916 151 aa6.08□□□□□ -1.44
COPA-205ENST00000541366 CD164Q04900 197 aa6.08□□□□□ -1.44
COPA-205ENST00000541366 SEC11CQ9BY50 192 aa6.08□□□□□ -1.44
COPA-205ENST00000541366 MT2AP02795 61 aa6.07□□□□□ -1.44
COPA-205ENST00000541366 S100PP25815 95 aa6.07□□□□□ -1.44
COPA-205ENST00000541366 SOSTDC1Q6X4U4 206 aa6.07□□□□□ -1.44
COPA-205ENST00000541366 SMIM29Q86T20 159 aa6.07□□□□□ -1.44
COPA-205ENST00000541366 TRAV12-1A0A0B4J245 112 aa6.06□□□□□ -1.44
COPA-205ENST00000541366 Q5XG85 94 aa6.06□□□□□ -1.44
COPA-205ENST00000541366 SLC25A34Q6PIV7 304 aa6.06□□□□□ -1.44
COPA-205ENST00000541366 DEFB105AQ8NG35 78 aa6.06□□□□□ -1.44
COPA-205ENST00000541366 KRTAP9-3Q9BYQ3 159 aa6.06□□□□□ -1.44
COPA-205ENST00000541366 PRO1933Q9H354 126 aa6.06□□□□□ -1.44
COPA-205ENST00000541366 NDUFC2O95298 119 aa6.05□□□□□ -1.44
COPA-205ENST00000541366 COX19Q49B96 90 aa6.05□□□□□ -1.44
COPA-205ENST00000541366 IFI27L1Q96BM0 104 aa6.05□□□□□ -1.44
COPA-205ENST00000541366 MIEN1Q9BRT3 115 aa6.05□□□□□ -1.44
COPA-205ENST00000541366 MT1FP04733 61 aa6.03□□□□□ -1.44
COPA-205ENST00000541366 TRAPPC1Q9Y5R8 145 aa6.03□□□□□ -1.44
COPA-205ENST00000541366 LEPROTO15243 131 aa6.02□□□□□ -1.45
COPA-205ENST00000541366 HINT1P49773 126 aaPredicted RBP6.02□□□□□ -1.45
COPA-205ENST00000541366 AKR1D1P51857 326 aa6.02□□□□□ -1.45
COPA-205ENST00000541366 TAL2Q16559 108 aa6.02□□□□□ -1.45
COPA-205ENST00000541366 ADAMTSL4-AS1Q5T5F5 129 aa6.02□□□□□ -1.45
COPA-205ENST00000541366 LCE5AQ5TCM9 118 aa6.02□□□□□ -1.45
COPA-205ENST00000541366 DHRS4-AS1Q9P1J3 65 aa6.02□□□□□ -1.45
COPA-205ENST00000541366 H0Y8G0 127 aa6.01□□□□□ -1.45
COPA-205ENST00000541366 COMMD7Q86VX2 200 aa6.01□□□□□ -1.45
COPA-205ENST00000541366 KRTAP3-1Q9BYR8 98 aa6.01□□□□□ -1.45
COPA-205ENST00000541366 TMEM218A2RU14 115 aa6□□□□□ -1.45
COPA-205ENST00000541366 J3QQQ9 107 aa6□□□□□ -1.45
COPA-205ENST00000541366 ATP11AUNQ6ZP68 121 aa6□□□□□ -1.45
COPA-205ENST00000541366 C20orf202A1L168 122 aa5.99□□□□□ -1.45
COPA-205ENST00000541366 OR13C6PQ8NH95 151 aa5.99□□□□□ -1.45
COPA-205ENST00000541366 TEX49A0A1B0GTD5 131 aa5.98□□□□□ -1.45
COPA-205ENST00000541366 C21orf62-AS1Q17RA5 79 aa5.98□□□□□ -1.45
COPA-205ENST00000541366 OBSCN-AS1Q96MR7 158 aa5.98□□□□□ -1.45
COPA-205ENST00000541366 COX7BP24311 80 aa5.97□□□□□ -1.45
COPA-205ENST00000541366 ELOF1P60002 83 aaKnown RBP5.97□□□□□ -1.45
COPA-205ENST00000541366 IFITM2Q01629 132 aa5.97□□□□□ -1.45
COPA-205ENST00000541366 RHEBQ15382 184 aa5.97□□□□□ -1.45
COPA-205ENST00000541366 PCP2Q8IVA1 136 aa5.97□□□□□ -1.45
COPA-205ENST00000541366 KRTAP10-10P60014 251 aa5.96□□□□□ -1.46
COPA-205ENST00000541366 Q75L30 129 aa5.96□□□□□ -1.46
COPA-205ENST00000541366 A0A0J9YXY3 114 aa5.95□□□□□ -1.46
COPA-205ENST00000541366 LGALS3P17931 250 aaKnown RBP5.95□□□□□ -1.46
COPA-205ENST00000541366 NMUP48645 174 aa5.95□□□□□ -1.46
COPA-205ENST00000541366 C6orf99Q4VX62 202 aa5.95□□□□□ -1.46
COPA-205ENST00000541366 PMCHL2Q9BQD1 86 aa5.95□□□□□ -1.46
COPA-205ENST00000541366 TCL1BO95988 128 aa5.94□□□□□ -1.46
COPA-205ENST00000541366 CHCHD1Q96BP2 118 aaKnown RBP5.94□□□□□ -1.46
COPA-205ENST00000541366 KRTAP4-11Q9BYQ6 195 aa5.94□□□□□ -1.46
COPA-205ENST00000541366 CBY1Q9Y3M2 126 aa5.94□□□□□ -1.46
COPA-205ENST00000541366 CLLU1Q5K131 121 aa5.93□□□□□ -1.46
COPA-205ENST00000541366 KRTAP4-2Q9BYR5 136 aa5.93□□□□□ -1.46
COPA-205ENST00000541366 KRTAP19-6Q3LI70 58 aa5.92□□□□□ -1.46
COPA-205ENST00000541366 UQCC3Q6UW78 93 aa5.92□□□□□ -1.46
COPA-205ENST00000541366 LINC00308Q8TCZ7 52 aa5.92□□□□□ -1.46
COPA-205ENST00000541366 SPANXCQ9NY87 97 aa5.92□□□□□ -1.46
COPA-205ENST00000541366 IGLV5-48A0A075B6I7 105 aa5.91□□□□□ -1.46
COPA-205ENST00000541366 KRTAP6-3Q3LI67 103 aa5.91□□□□□ -1.46
COPA-205ENST00000541366 PLNP26678 52 aa5.9□□□□□ -1.46
COPA-205ENST00000541366 HERVK_113P61574 105 aa5.9□□□□□ -1.46
COPA-205ENST00000541366 C10orf91Q5T1B1 145 aa5.9□□□□□ -1.46
COPA-205ENST00000541366 LITAFQ99732 161 aa5.9□□□□□ -1.46
COPA-205ENST00000541366 SPANXDQ9BXN6 97 aa5.9□□□□□ -1.46
COPA-205ENST00000541366 TRBV20-1A0A075B6N2 111 aa5.89□□□□□ -1.47
COPA-205ENST00000541366 HSBP1O75506 76 aa5.89□□□□□ -1.47
COPA-205ENST00000541366 DPM2O94777 84 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms