RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 ORMDL3Q8N138 153 aa5.17□□□□□ -1.58
YBX3-211ENST00000541351 NAA38Q9BRA0 125 aaKnown RBP5.17□□□□□ -1.58
YBX3-211ENST00000541351 A0A096LNJ9 63 aa5.16□□□□□ -1.58
YBX3-211ENST00000541351 NMUP48645 174 aa5.16□□□□□ -1.58
YBX3-211ENST00000541351 ETDBQ3ZM63 59 aa5.16□□□□□ -1.58
YBX3-211ENST00000541351 RNASE13Q5GAN3 156 aaKnown RBP5.16□□□□□ -1.58
YBX3-211ENST00000541351 Q8NBF4 154 aa5.16□□□□□ -1.58
YBX3-211ENST00000541351 LINC00167Q96N53 147 aa5.16□□□□□ -1.58
YBX3-211ENST00000541351 ZNF706Q9Y5V0 76 aaPredicted RBP5.16□□□□□ -1.58
YBX3-211ENST00000541351 PRSS2P07478 247 aa5.15□□□□□ -1.59
YBX3-211ENST00000541351 IFI27P40305 119 aaPredicted RBP5.15□□□□□ -1.59
YBX3-211ENST00000541351 FAM104BQ5XKR9 115 aa5.15□□□□□ -1.59
YBX3-211ENST00000541351 Q6ZUT4 128 aa5.15□□□□□ -1.59
YBX3-211ENST00000541351 PCP2Q8IVA1 136 aa5.15□□□□□ -1.59
YBX3-211ENST00000541351 NKAPP1Q8N9T2 125 aa5.15□□□□□ -1.59
YBX3-211ENST00000541351 PPDPFLQ8WWR9 84 aa5.15□□□□□ -1.59
YBX3-211ENST00000541351 PRELID3AQ96N28 172 aa5.15□□□□□ -1.59
YBX3-211ENST00000541351 TIMM21Q9BVV7 248 aa5.15□□□□□ -1.59
YBX3-211ENST00000541351 CNFNQ9BYD5 112 aa5.15□□□□□ -1.59
YBX3-211ENST00000541351 XAGE1AQ9HD64 81 aa5.15□□□□□ -1.59
YBX3-211ENST00000541351 NHP2Q9NX24 153 aaKnown RBP5.15□□□□□ -1.59
YBX3-211ENST00000541351 TRBV27A0A0K0K1C4 114 aa5.14□□□□□ -1.59
YBX3-211ENST00000541351 DPM2O94777 84 aa5.14□□□□□ -1.59
YBX3-211ENST00000541351 IGKCP01834 107 aa5.14□□□□□ -1.59
YBX3-211ENST00000541351 Q6Q795 121 aa5.14□□□□□ -1.59
YBX3-211ENST00000541351 ANAPC13Q9BS18 74 aa5.14□□□□□ -1.59
YBX3-211ENST00000541351 VCYO14598 125 aa5.13□□□□□ -1.59
YBX3-211ENST00000541351 KIAA0087Q14695 138 aa5.13□□□□□ -1.59
YBX3-211ENST00000541351 KRTAP20-1Q3LI63 56 aa5.13□□□□□ -1.59
YBX3-211ENST00000541351 C2orf82Q6UX34 121 aa5.13□□□□□ -1.59
YBX3-211ENST00000541351 FAM19A1Q7Z5A9 133 aa5.13□□□□□ -1.59
YBX3-211ENST00000541351 PLEKHB2Q96CS7 222 aa5.13□□□□□ -1.59
YBX3-211ENST00000541351 MAP1LC3AQ9H492 121 aa5.13□□□□□ -1.59
YBX3-211ENST00000541351 NXT2Q9NPJ8 142 aaKnown RBP5.13□□□□□ -1.59
YBX3-211ENST00000541351 TRBV20-1A0A075B6N2 111 aa5.12□□□□□ -1.59
YBX3-211ENST00000541351 D6R8Y8 96 aa5.12□□□□□ -1.59
YBX3-211ENST00000541351 PPP1R17O96001 155 aa5.12□□□□□ -1.59
YBX3-211ENST00000541351 RPL32P62910 135 aaKnown RBP5.12□□□□□ -1.59
YBX3-211ENST00000541351 PRLHP81277 87 aa5.12□□□□□ -1.59
YBX3-211ENST00000541351 TEN1Q86WV5 123 aa5.12□□□□□ -1.59
YBX3-211ENST00000541351 Q8N377 158 aa5.12□□□□□ -1.59
YBX3-211ENST00000541351 C20orf78Q9BR46 151 aa5.12□□□□□ -1.59
YBX3-211ENST00000541351 K7ERJ3 54 aa5.11□□□□□ -1.59
YBX3-211ENST00000541351 PLNP26678 52 aa5.11□□□□□ -1.59
YBX3-211ENST00000541351 POLR2KP53803 58 aaKnown RBP5.11□□□□□ -1.59
YBX3-211ENST00000541351 MRPL51Q4U2R6 128 aaKnown RBP5.11□□□□□ -1.59
YBX3-211ENST00000541351 C6orf226Q5I0X4 101 aa5.11□□□□□ -1.59
YBX3-211ENST00000541351 LINC01561Q8N1V8 128 aa5.11□□□□□ -1.59
YBX3-211ENST00000541351 SPANXDQ9BXN6 97 aa5.11□□□□□ -1.59
YBX3-211ENST00000541351 MT-ATP8P03928 68 aa5.1□□□□□ -1.59
YBX3-211ENST00000541351 FLGP20930 4061 aaPredicted RBP5.1□□□□□ -1.59
YBX3-211ENST00000541351 CKS2P33552 79 aa5.1□□□□□ -1.59
YBX3-211ENST00000541351 HIST1H4GQ99525 98 aa5.1□□□□□ -1.59
YBX3-211ENST00000541351 SS18L2Q9UHA2 77 aa5.1□□□□□ -1.59
YBX3-211ENST00000541351 TRAV12-1A0A0B4J245 112 aa5.09□□□□□ -1.59
YBX3-211ENST00000541351 LOC389332A0A1B0GUA5 103 aa5.09□□□□□ -1.59
YBX3-211ENST00000541351 ZC2HC1BQ5TFG8 222 aa5.09□□□□□ -1.59
YBX3-211ENST00000541351 Q8N8P6 123 aa5.09□□□□□ -1.59
YBX3-211ENST00000541351 HIGD2AQ9BW72 106 aa5.09□□□□□ -1.59
YBX3-211ENST00000541351 IGLV5-37A0A075B6J1 123 aa5.08□□□□□ -1.6
YBX3-211ENST00000541351 IGKV2-28A0A075B6P5 120 aa5.08□□□□□ -1.6
YBX3-211ENST00000541351 MYMXA0A1B0GTQ4 84 aa5.08□□□□□ -1.6
YBX3-211ENST00000541351 H3BS24 57 aa5.08□□□□□ -1.6
YBX3-211ENST00000541351 NPYP01303 97 aa5.08□□□□□ -1.6
YBX3-211ENST00000541351 IGKV2D-28P01615 120 aa5.08□□□□□ -1.6
YBX3-211ENST00000541351 MRPS36P82909 103 aaKnown RBP5.08□□□□□ -1.6
YBX3-211ENST00000541351 AMN1Q8IY45 258 aa5.08□□□□□ -1.6
YBX3-211ENST00000541351 SPRR4Q96PI1 79 aa5.08□□□□□ -1.6
YBX3-211ENST00000541351 TMEM126AQ9H061 195 aa5.08□□□□□ -1.6
YBX3-211ENST00000541351 SPANXCQ9NY87 97 aa5.08□□□□□ -1.6
YBX3-211ENST00000541351 B5MCH6 92 aa5.07□□□□□ -1.6
YBX3-211ENST00000541351 K7EMI3 77 aa5.07□□□□□ -1.6
YBX3-211ENST00000541351 NDUFV3P56181 108 aaKnown RBP5.07□□□□□ -1.6
YBX3-211ENST00000541351 HERV-K104P63124 156 aa5.07□□□□□ -1.6
YBX3-211ENST00000541351 TOMM7Q9P0U1 55 aa5.07□□□□□ -1.6
YBX3-211ENST00000541351 F8VRH5 84 aa5.06□□□□□ -1.6
YBX3-211ENST00000541351 SNCGO76070 127 aa5.06□□□□□ -1.6
YBX3-211ENST00000541351 IFITM1P13164 125 aa5.06□□□□□ -1.6
YBX3-211ENST00000541351 CXCL5P42830 114 aa5.06□□□□□ -1.6
YBX3-211ENST00000541351 SSBP3-AS1Q7Z2R9 100 aa5.06□□□□□ -1.6
YBX3-211ENST00000541351 Q8IZM0 81 aa5.06□□□□□ -1.6
YBX3-211ENST00000541351 KRTAP9-8Q9BYQ0 159 aa5.06□□□□□ -1.6
YBX3-211ENST00000541351 LINC01549A6NIU2 74 aa5.05□□□□□ -1.6
YBX3-211ENST00000541351 SCGB1C2P0DMR2 95 aa5.05□□□□□ -1.6
YBX3-211ENST00000541351 PSMB2P49721 201 aa5.05□□□□□ -1.6
YBX3-211ENST00000541351 SUMO2P61956 95 aaKnown RBP5.05□□□□□ -1.6
YBX3-211ENST00000541351 PAPPA-AS1Q5QFB9 102 aa5.04□□□□□ -1.6
YBX3-211ENST00000541351 HERVK_113P61574 105 aa5.03□□□□□ -1.6
YBX3-211ENST00000541351 ORMDL2Q53FV1 153 aa5.03□□□□□ -1.6
YBX3-211ENST00000541351 SMIM20Q8N5G0 67 aa5.03□□□□□ -1.6
YBX3-211ENST00000541351 TTTY13Q9BZ97 58 aa5.03□□□□□ -1.6
YBX3-211ENST00000541351 LOC107984156A0A0G2JMH3 177 aa5.02□□□□□ -1.61
YBX3-211ENST00000541351 FAM240AA0A1B0GVK7 77 aa5.02□□□□□ -1.61
YBX3-211ENST00000541351 C9orf92A6NGG3 77 aa5.02□□□□□ -1.61
YBX3-211ENST00000541351 SMKR1H3BMG3 65 aa5.02□□□□□ -1.61
YBX3-211ENST00000541351 KRTAP19-6Q3LI70 58 aa5.02□□□□□ -1.61
YBX3-211ENST00000541351 ARL17AQ8IVW1 177 aa5.02□□□□□ -1.61
YBX3-211ENST00000541351 ANKRD29Q8N6D5 301 aa5.02□□□□□ -1.61
YBX3-211ENST00000541351 TCL1BO95988 128 aa5.01□□□□□ -1.61
YBX3-211ENST00000541351 LIMD2Q9BT23 127 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 216.7 ms