RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 KRTAP4-16G5E9R7 235 aaPredicted RBP9.02□□□□□ -0.97
MDM1-210ENST00000540418 PRLHP81277 87 aa9.02□□□□□ -0.97
MDM1-210ENST00000540418 TRAV23DV6A0A075B6W5 121 aa9.01□□□□□ -0.97
MDM1-210ENST00000540418 ETDCA0A1B0GVM5 59 aa9.01□□□□□ -0.97
MDM1-210ENST00000540418 LINC01600Q96MT4 127 aa9□□□□□ -0.97
MDM1-210ENST00000540418 C2orf91Q6ZV80 131 aa9□□□□□ -0.97
MDM1-210ENST00000540418 J3QL48 77 aa8.99□□□□□ -0.97
MDM1-210ENST00000540418 A4D1N5 150 aa8.98□□□□□ -0.97
MDM1-210ENST00000540418 A6NDN8 102 aa8.98□□□□□ -0.97
MDM1-210ENST00000540418 ZNF73O43830 326 aaPredicted RBP8.98□□□□□ -0.97
MDM1-210ENST00000540418 TRAV13-2A0A0B4J235 113 aa8.98□□□□□ -0.97
MDM1-210ENST00000540418 B5MCH6 92 aa8.98□□□□□ -0.97
MDM1-210ENST00000540418 LRP1Q07954 4544 aaKnown RBP8.96□□□□□ -0.97
MDM1-210ENST00000540418 HIGD2AQ9BW72 106 aa8.96□□□□□ -0.97
MDM1-210ENST00000540418 LOC105371267A0A1B0GV96 52 aa8.96□□□□□ -0.98
MDM1-210ENST00000540418 KRTAP1-4P0C5Y4 121 aa8.96□□□□□ -0.98
MDM1-210ENST00000540418 HINT1P49773 126 aaPredicted RBP8.95□□□□□ -0.98
MDM1-210ENST00000540418 TAL2Q16559 108 aa8.95□□□□□ -0.98
MDM1-210ENST00000540418 SMIM6P0DI80 62 aa8.95□□□□□ -0.98
MDM1-210ENST00000540418 Q6ZRX8 168 aa8.95□□□□□ -0.98
MDM1-210ENST00000540418 UQCR10Q9UDW1 63 aa8.95□□□□□ -0.98
MDM1-210ENST00000540418 MT1HL1P0DM35 61 aa8.94□□□□□ -0.98
MDM1-210ENST00000540418 FAT3Q8TDW7 4589 aa8.94□□□□□ -0.98
MDM1-210ENST00000540418 KRTAP10-8P60410 259 aa8.93□□□□□ -0.98
MDM1-210ENST00000540418 SMCR5Q8TEV8 140 aa8.93□□□□□ -0.98
MDM1-210ENST00000540418 CEND1Q8N111 149 aa8.92□□□□□ -0.98
MDM1-210ENST00000540418 C6orf99Q4VX62 202 aa8.92□□□□□ -0.98
MDM1-210ENST00000540418 C12orf57Q99622 126 aa8.91□□□□□ -0.98
MDM1-210ENST00000540418 Q9BRP9 147 aa8.91□□□□□ -0.98
MDM1-210ENST00000540418 PRR26Q8N8Z3 221 aa8.9□□□□□ -0.98
MDM1-210ENST00000540418 TRBV7-6A0A0J9YX20 115 aa8.9□□□□□ -0.99
MDM1-210ENST00000540418 SMIM11BQ8TCY0 68 aa8.9□□□□□ -0.99
MDM1-210ENST00000540418 CFC1BP0CG36 223 aa8.89□□□□□ -0.99
MDM1-210ENST00000540418 CFC1P0CG37 223 aa8.89□□□□□ -0.99
MDM1-210ENST00000540418 COX7BP24311 80 aa8.89□□□□□ -0.99
MDM1-210ENST00000540418 ZNF706Q9Y5V0 76 aaPredicted RBP8.89□□□□□ -0.99
MDM1-210ENST00000540418 ELOF1P60002 83 aaKnown RBP8.89□□□□□ -0.99
MDM1-210ENST00000540418 HSD52Q0P140 79 aa8.89□□□□□ -0.99
MDM1-210ENST00000540418 ERC2-IT1O76042 136 aa8.88□□□□□ -0.99
MDM1-210ENST00000540418 ANAPC11Q9NYG5 84 aa8.88□□□□□ -0.99
MDM1-210ENST00000540418 TMEM238LA0A1B0GVL6 79 aa8.88□□□□□ -0.99
MDM1-210ENST00000540418 A6NJY4 79 aa8.88□□□□□ -0.99
MDM1-210ENST00000540418 RPL13AP40429 203 aaKnown RBP8.88□□□□□ -0.99
MDM1-210ENST00000540418 SPRR4Q96PI1 79 aa8.88□□□□□ -0.99
MDM1-210ENST00000540418 PRO1933Q9H354 126 aa8.88□□□□□ -0.99
MDM1-210ENST00000540418 FAM229BQ4G0N7 80 aa8.87□□□□□ -0.99
MDM1-210ENST00000540418 CRYGAP11844 174 aa8.87□□□□□ -0.99
MDM1-210ENST00000540418 RAB37Q96AX2 223 aa8.87□□□□□ -0.99
MDM1-210ENST00000540418 DHRS4-AS1Q9P1J3 65 aa8.87□□□□□ -0.99
MDM1-210ENST00000540418 DMBT1Q9UGM3 2413 aaPredicted RBP8.86□□□□□ -0.99
MDM1-210ENST00000540418 A0A0B4J2C4 111 aa8.86□□□□□ -0.99
MDM1-210ENST00000540418 A0A1B0GWB2 263 aa8.86□□□□□ -0.99
MDM1-210ENST00000540418 FXYD2P54710 66 aa8.86□□□□□ -0.99
MDM1-210ENST00000540418 A0A087X002 238 aa8.85□□□□□ -0.99
MDM1-210ENST00000540418 VAMP3Q15836 100 aa8.84□□□□□ -0.99
MDM1-210ENST00000540418 LINC00483Q53H64 154 aa8.82□□□□□ -1
MDM1-210ENST00000540418 GAGE2AQ6NT46 116 aa8.82□□□□□ -1
MDM1-210ENST00000540418 PRO1854Q9UHT4 67 aa8.82□□□□□ -1
MDM1-210ENST00000540418 H7C2G1 150 aa8.82□□□□□ -1
MDM1-210ENST00000540418 TNXBP22105 4242 aa8.82□□□□□ -1
MDM1-210ENST00000540418 KRTAP13-2Q52LG2 175 aa8.81□□□□□ -1
MDM1-210ENST00000540418 ST20-AS1Q8NBB2 130 aa8.81□□□□□ -1
MDM1-210ENST00000540418 TYMSOSQ8TAI1 123 aa8.81□□□□□ -1
MDM1-210ENST00000540418 NHP2Q9NX24 153 aaKnown RBP8.8□□□□□ -1
MDM1-210ENST00000540418 BVES-AS1Q5T3Y7 98 aa8.79□□□□□ -1
MDM1-210ENST00000540418 TSTD3H0UI37 97 aa8.79□□□□□ -1
MDM1-210ENST00000540418 SLC25A20O43772 301 aa8.78□□□□□ -1
MDM1-210ENST00000540418 LINC00575Q6W349 94 aa8.78□□□□□ -1
MDM1-210ENST00000540418 CTAG1AP78358 180 aa8.77□□□□□ -1.01
MDM1-210ENST00000540418 Q1RN00 199 aa8.77□□□□□ -1.01
MDM1-210ENST00000540418 C3orf22Q8N5N4 141 aa8.77□□□□□ -1.01
MDM1-210ENST00000540418 SPRR1BP22528 89 aa8.75□□□□□ -1.01
MDM1-210ENST00000540418 K7ERJ3 54 aa8.75□□□□□ -1.01
MDM1-210ENST00000540418 hADV29S1A0JD25 119 aa8.74□□□□□ -1.01
MDM1-210ENST00000540418 DEFB105AQ8NG35 78 aa8.74□□□□□ -1.01
MDM1-210ENST00000540418 HERC1Q15751 4861 aa8.74□□□□□ -1.01
MDM1-210ENST00000540418 H0YGX0 51 aa8.74□□□□□ -1.01
MDM1-210ENST00000540418 M0R143 59 aa8.73□□□□□ -1.01
MDM1-210ENST00000540418 TEX49A0A1B0GTD5 131 aa8.73□□□□□ -1.01
MDM1-210ENST00000540418 IGLV5-48A0A075B6I7 105 aa8.72□□□□□ -1.01
MDM1-210ENST00000540418 IGLV9-49A0A0B4J1Y8 123 aa8.72□□□□□ -1.01
MDM1-210ENST00000540418 LINC01547P58512 204 aaPredicted RBP8.71□□□□□ -1.02
MDM1-210ENST00000540418 TRIAP1O43715 76 aa8.7□□□□□ -1.02
MDM1-210ENST00000540418 LAMTOR3Q9UHA4 124 aa8.7□□□□□ -1.02
MDM1-210ENST00000540418 SSBP3-AS1Q7Z2R9 100 aa8.7□□□□□ -1.02
MDM1-210ENST00000540418 LINC00304Q8N9R0 145 aa8.7□□□□□ -1.02
MDM1-210ENST00000540418 SNCGO76070 127 aa8.69□□□□□ -1.02
MDM1-210ENST00000540418 TSPAN13O95857 204 aa8.69□□□□□ -1.02
MDM1-210ENST00000540418 MOBPQ13875 183 aa8.69□□□□□ -1.02
MDM1-210ENST00000540418 PSMB2P49721 201 aa8.69□□□□□ -1.02
MDM1-210ENST00000540418 Q6ZQY7 126 aa8.69□□□□□ -1.02
MDM1-210ENST00000540418 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.68□□□□□ -1.02
MDM1-210ENST00000540418 Q8N377 158 aa8.68□□□□□ -1.02
MDM1-210ENST00000540418 Q8NBF4 154 aa8.68□□□□□ -1.02
MDM1-210ENST00000540418 C9orf153Q5TBE3 101 aa8.67□□□□□ -1.02
MDM1-210ENST00000540418 FAM218AQ96MZ4 157 aa8.67□□□□□ -1.02
MDM1-210ENST00000540418 COX6CP09669 75 aa8.66□□□□□ -1.02
MDM1-210ENST00000540418 SMIM29Q86T20 159 aa8.66□□□□□ -1.02
MDM1-210ENST00000540418 SPAG11AQ6PDA7 123 aa8.66□□□□□ -1.02
MDM1-210ENST00000540418 A0A1B0GX51 115 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms