RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 SMCR5Q8TEV8 140 aa7.5□□□□□ -1.21
SNHG1-206ENST00000537925 JMJD7-PLA2G4BH0Y9G9 81 aa7.49□□□□□ -1.21
SNHG1-206ENST00000537925 IGLV5-52A0A0A0MRZ9 124 aa7.49□□□□□ -1.21
SNHG1-206ENST00000537925 USP17L23D6RBM5 183 aa7.49□□□□□ -1.21
SNHG1-206ENST00000537925 H3BQ85 93 aa7.49□□□□□ -1.21
SNHG1-206ENST00000537925 TMEM256-PLSCR3K7ERE1 68 aa7.48□□□□□ -1.21
SNHG1-206ENST00000537925 C14orf177Q52M58 125 aa7.48□□□□□ -1.21
SNHG1-206ENST00000537925 GAGE2AQ6NT46 116 aa7.48□□□□□ -1.21
SNHG1-206ENST00000537925 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.47□□□□□ -1.21
SNHG1-206ENST00000537925 CDK2AP2O75956 126 aa7.46□□□□□ -1.22
SNHG1-206ENST00000537925 KRTAP10-1P60331 282 aa7.46□□□□□ -1.22
SNHG1-206ENST00000537925 Q6JHZ5 121 aa7.46□□□□□ -1.22
SNHG1-206ENST00000537925 F8WDY8 70 aa7.45□□□□□ -1.22
SNHG1-206ENST00000537925 IGLV6-57P01721 117 aa7.45□□□□□ -1.22
SNHG1-206ENST00000537925 C14orf132Q9NPU4 83 aa7.45□□□□□ -1.22
SNHG1-206ENST00000537925 CCKP06307 115 aa7.44□□□□□ -1.22
SNHG1-206ENST00000537925 S100A7L2Q5SY68 101 aa7.44□□□□□ -1.22
SNHG1-206ENST00000537925 UNQ6190/PRO20217Q6UXQ8 127 aa7.44□□□□□ -1.22
SNHG1-206ENST00000537925 LINC00575Q6W349 94 aa7.44□□□□□ -1.22
SNHG1-206ENST00000537925 FAM236AA0A1B0GUQ0 79 aa7.43□□□□□ -1.22
SNHG1-206ENST00000537925 FAM236BA0A1B0GV22 79 aa7.43□□□□□ -1.22
SNHG1-206ENST00000537925 HIST1H4AP62805 103 aaKnown RBP7.43□□□□□ -1.22
SNHG1-206ENST00000537925 C9orf116Q5BN46 136 aaPredicted RBP7.43□□□□□ -1.22
SNHG1-206ENST00000537925 C9orf129Q5T035 196 aaKnown RBP7.43□□□□□ -1.22
SNHG1-206ENST00000537925 C15orf56Q8N910 161 aa7.43□□□□□ -1.22
SNHG1-206ENST00000537925 HERC1Q15751 4861 aa7.43□□□□□ -1.22
SNHG1-206ENST00000537925 PRR3P79522 188 aaKnown RBP7.43□□□□□ -1.22
SNHG1-206ENST00000537925 C6orf99Q4VX62 202 aa7.43□□□□□ -1.22
SNHG1-206ENST00000537925 C10orf25Q5T742 122 aa7.43□□□□□ -1.22
SNHG1-206ENST00000537925 Q8NDZ9 215 aa7.43□□□□□ -1.22
SNHG1-206ENST00000537925 KRTAP4-5Q9BYR2 181 aa7.43□□□□□ -1.22
SNHG1-206ENST00000537925 TRBV7-6A0A0J9YX20 115 aa7.42□□□□□ -1.22
SNHG1-206ENST00000537925 NCR3O14931 201 aa7.42□□□□□ -1.22
SNHG1-206ENST00000537925 ATP5EP2Q5VTU8 51 aa7.42□□□□□ -1.22
SNHG1-206ENST00000537925 CCDC179H3BU77 68 aa7.41□□□□□ -1.22
SNHG1-206ENST00000537925 GHRHP01286 108 aa7.41□□□□□ -1.22
SNHG1-206ENST00000537925 SLPIP03973 132 aa7.41□□□□□ -1.22
SNHG1-206ENST00000537925 CNBPP62633 177 aaKnown RBP7.41□□□□□ -1.22
SNHG1-206ENST00000537925 C9orf163Q8N9P6 203 aa7.41□□□□□ -1.22
SNHG1-206ENST00000537925 C2orf48Q96LS8 159 aa7.41□□□□□ -1.22
SNHG1-206ENST00000537925 C6orf48Q9UBA6 75 aa7.41□□□□□ -1.22
SNHG1-206ENST00000537925 UBR4Q5T4S7 5183 aa7.41□□□□□ -1.22
SNHG1-206ENST00000537925 hADV29S1A0JD25 119 aa7.4□□□□□ -1.22
SNHG1-206ENST00000537925 Q6ZSA8 131 aa7.4□□□□□ -1.22
SNHG1-206ENST00000537925 LINC00846Q9NV44 126 aa7.4□□□□□ -1.22
SNHG1-206ENST00000537925 LOC110117498A0A087WWA1 95 aa7.39□□□□□ -1.23
SNHG1-206ENST00000537925 B5MCH6 92 aa7.39□□□□□ -1.23
SNHG1-206ENST00000537925 ZNF561-AS1K7EIQ3 104 aa7.39□□□□□ -1.23
SNHG1-206ENST00000537925 ATOX1O00244 68 aa7.39□□□□□ -1.23
SNHG1-206ENST00000537925 FAM30AQ9NZY2 134 aa7.39□□□□□ -1.23
SNHG1-206ENST00000537925 UQCRQO14949 82 aa7.38□□□□□ -1.23
SNHG1-206ENST00000537925 HIGD2BQ4VC39 106 aa7.38□□□□□ -1.23
SNHG1-206ENST00000537925 TRAV23DV6A0A075B6W5 121 aa7.37□□□□□ -1.23
SNHG1-206ENST00000537925 TRBV10-3A0A0K0K1G6 114 aa7.37□□□□□ -1.23
SNHG1-206ENST00000537925 PDE6GP18545 87 aa7.37□□□□□ -1.23
SNHG1-206ENST00000537925 RPL18AQ02543 176 aaKnown RBP7.37□□□□□ -1.23
SNHG1-206ENST00000537925 DIRC1Q969H9 104 aa7.37□□□□□ -1.23
SNHG1-206ENST00000537925 FAT1Q14517 4588 aa7.37□□□□□ -1.23
SNHG1-206ENST00000537925 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-206ENST00000537925 VPS13BQ7Z7G8 4022 aa7.36□□□□□ -1.23
SNHG1-206ENST00000537925 VPREB1P12018 145 aa7.36□□□□□ -1.23
SNHG1-206ENST00000537925 C3orf22Q8N5N4 141 aa7.36□□□□□ -1.23
SNHG1-206ENST00000537925 CAMK2N2Q96S95 79 aa7.36□□□□□ -1.23
SNHG1-206ENST00000537925 ELOF1P60002 83 aaKnown RBP7.35□□□□□ -1.23
SNHG1-206ENST00000537925 RBM3P98179 157 aaKnown RBP7.35□□□□□ -1.23
SNHG1-206ENST00000537925 LINC00526Q96FQ7 95 aa7.35□□□□□ -1.23
SNHG1-206ENST00000537925 NDUFC2-KCTD14E9PQ53 114 aa7.34□□□□□ -1.23
SNHG1-206ENST00000537925 M0R378 163 aa7.34□□□□□ -1.23
SNHG1-206ENST00000537925 COX7CP15954 63 aa7.34□□□□□ -1.23
SNHG1-206ENST00000537925 HAMPP81172 84 aa7.34□□□□□ -1.23
SNHG1-206ENST00000537925 Q6ZQT0 140 aa7.34□□□□□ -1.23
SNHG1-206ENST00000537925 ZNF73O43830 326 aaPredicted RBP7.33□□□□□ -1.24
SNHG1-206ENST00000537925 COX7BP24311 80 aa7.33□□□□□ -1.24
SNHG1-206ENST00000537925 Q8N1X5 172 aa7.33□□□□□ -1.24
SNHG1-206ENST00000537925 UBL5Q9BZL1 73 aa7.33□□□□□ -1.24
SNHG1-206ENST00000537925 SCXQ7RTU7 201 aa7.32□□□□□ -1.24
SNHG1-206ENST00000537925 SS18L2Q9UHA2 77 aa7.32□□□□□ -1.24
SNHG1-206ENST00000537925 SYCNQ0VAF6 134 aa7.31□□□□□ -1.24
SNHG1-206ENST00000537925 Q6ZRU5 148 aa7.31□□□□□ -1.24
SNHG1-206ENST00000537925 IGKV3D-7A0A0C4DH55 119 aa7.3□□□□□ -1.24
SNHG1-206ENST00000537925 PANO1I0J062 215 aa7.3□□□□□ -1.24
SNHG1-206ENST00000537925 CRYGAP11844 174 aa7.3□□□□□ -1.24
SNHG1-206ENST00000537925 Q6ZQY7 126 aa7.3□□□□□ -1.24
SNHG1-206ENST00000537925 CIRBP-AS1Q8TBR5 109 aa7.3□□□□□ -1.24
SNHG1-206ENST00000537925 XAGE1AQ9HD64 81 aa7.3□□□□□ -1.24
SNHG1-206ENST00000537925 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.3□□□□□ -1.24
SNHG1-206ENST00000537925 BCE1O60756 84 aa7.3□□□□□ -1.24
SNHG1-206ENST00000537925 SMR3BP02814 79 aaPredicted RBP7.3□□□□□ -1.24
SNHG1-206ENST00000537925 TLX1NBP0CAT3 122 aa7.3□□□□□ -1.24
SNHG1-206ENST00000537925 C9orf153Q5TBE3 101 aa7.3□□□□□ -1.24
SNHG1-206ENST00000537925 DSCR8Q96T75 97 aa7.3□□□□□ -1.24
SNHG1-206ENST00000537925 LAMTOR3Q9UHA4 124 aa7.3□□□□□ -1.24
SNHG1-206ENST00000537925 LINC00528Q8N1L1 170 aa7.29□□□□□ -1.24
SNHG1-206ENST00000537925 SERP2Q8N6R1 65 aa7.29□□□□□ -1.24
SNHG1-206ENST00000537925 PLA2G2DQ9UNK4 145 aa7.29□□□□□ -1.24
SNHG1-206ENST00000537925 TRBV7-4A0A0J9YYF1 115 aa7.28□□□□□ -1.24
SNHG1-206ENST00000537925 SPACA4Q8TDM5 124 aa7.28□□□□□ -1.24
SNHG1-206ENST00000537925 EPM2AB3EWF7 344 aa7.27□□□□□ -1.25
SNHG1-206ENST00000537925 CHTF8P0CG12 524 aa7.27□□□□□ -1.25
SNHG1-206ENST00000537925 PKIGQ9Y2B9 76 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms