RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 CBY1Q9Y3M2 126 aa14.92□□□□□ -0.02
HMGA2-208ENST00000537429 M0R143 59 aa14.92□□□□□ -0.02
HMGA2-208ENST00000537429 KRTAP10-4P60372 401 aaPredicted RBP14.92□□□□□ -0.02
HMGA2-208ENST00000537429 RAB37Q96AX2 223 aa14.92□□□□□ -0.02
HMGA2-208ENST00000537429 NHP2Q9NX24 153 aaKnown RBP14.92□□□□□ -0.02
HMGA2-208ENST00000537429 A0A1B0GWB2 263 aa14.9□□□□□ -0.02
HMGA2-208ENST00000537429 BCE1O60756 84 aa14.9□□□□□ -0.02
HMGA2-208ENST00000537429 RPL13AP40429 203 aaKnown RBP14.89□□□□□ -0.03
HMGA2-208ENST00000537429 KRTAP4-16G5E9R7 235 aaPredicted RBP14.88□□□□□ -0.03
HMGA2-208ENST00000537429 ZNF73O43830 326 aaPredicted RBP14.87□□□□□ -0.03
HMGA2-208ENST00000537429 PRO1854Q9UHT4 67 aa14.87□□□□□ -0.03
HMGA2-208ENST00000537429 SMIM11BQ8TCY0 68 aa14.87□□□□□ -0.03
HMGA2-208ENST00000537429 IGLV7-43P04211 117 aa14.86□□□□□ -0.03
HMGA2-208ENST00000537429 HERC2O95714 4834 aa14.85□□□□□ -0.03
HMGA2-208ENST00000537429 K7ERJ3 54 aa14.84□□□□□ -0.03
HMGA2-208ENST00000537429 C6orf99Q4VX62 202 aa14.83□□□□□ -0.04
HMGA2-208ENST00000537429 FAM19A1Q7Z5A9 133 aa14.83□□□□□ -0.04
HMGA2-208ENST00000537429 DIRC1Q969H9 104 aa14.83□□□□□ -0.04
HMGA2-208ENST00000537429 UBE2AP49459 152 aa14.82□□□□□ -0.04
HMGA2-208ENST00000537429 ETDCA0A1B0GVM5 59 aa14.82□□□□□ -0.04
HMGA2-208ENST00000537429 KRTAP13-1Q8IUC0 172 aa14.82□□□□□ -0.04
HMGA2-208ENST00000537429 PCP4L1A6NKN8 68 aa14.81□□□□□ -0.04
HMGA2-208ENST00000537429 H7C2G1 150 aa14.81□□□□□ -0.04
HMGA2-208ENST00000537429 RPL28P46779 137 aaKnown RBP14.81□□□□□ -0.04
HMGA2-208ENST00000537429 B5MCH6 92 aa14.8□□□□□ -0.04
HMGA2-208ENST00000537429 PRLHP81277 87 aa14.8□□□□□ -0.04
HMGA2-208ENST00000537429 SRRM2Q9UQ35 2752 aaKnown RBP14.79□□□□□ -0.04
HMGA2-208ENST00000537429 H0Y9J4 135 aa14.79□□□□□ -0.04
HMGA2-208ENST00000537429 ZNF861PO60384 105 aa14.79□□□□□ -0.04
HMGA2-208ENST00000537429 BATFQ16520 125 aa14.78□□□□□ -0.04
HMGA2-208ENST00000537429 TRBV7-6A0A0J9YX20 115 aa14.76□□□□□ -0.05
HMGA2-208ENST00000537429 Q6ZRX8 168 aa14.76□□□□□ -0.05
HMGA2-208ENST00000537429 KRTAP4-5Q9BYR2 181 aa14.76□□□□□ -0.05
HMGA2-208ENST00000537429 ELOF1P60002 83 aaKnown RBP14.75□□□□□ -0.05
HMGA2-208ENST00000537429 Q1RN00 199 aa14.75□□□□□ -0.05
HMGA2-208ENST00000537429 TSPAN13O95857 204 aa14.73□□□□□ -0.05
HMGA2-208ENST00000537429 COX7BP24311 80 aa14.73□□□□□ -0.05
HMGA2-208ENST00000537429 SPINK6Q6UWN8 80 aa14.72□□□□□ -0.05
HMGA2-208ENST00000537429 SNHG12Q9BXW3 62 aa14.72□□□□□ -0.05
HMGA2-208ENST00000537429 Q9BRP9 147 aa14.71□□□□□ -0.05
HMGA2-208ENST00000537429 VAMP3Q15836 100 aa14.71□□□□□ -0.06
HMGA2-208ENST00000537429 SMCR5Q8TEV8 140 aa14.7□□□□□ -0.06
HMGA2-208ENST00000537429 HIGD2AQ9BW72 106 aa14.7□□□□□ -0.06
HMGA2-208ENST00000537429 PKHD1L1Q86WI1 4243 aa14.69□□□□□ -0.06
HMGA2-208ENST00000537429 TRIAP1O43715 76 aa14.67□□□□□ -0.06
HMGA2-208ENST00000537429 INAFM2P0DMQ5 153 aa14.66□□□□□ -0.06
HMGA2-208ENST00000537429 PSMB2P49721 201 aa14.65□□□□□ -0.06
HMGA2-208ENST00000537429 DHRS4-AS1Q9P1J3 65 aa14.65□□□□□ -0.06
HMGA2-208ENST00000537429 ERC2-IT1O76042 136 aa14.64□□□□□ -0.07
HMGA2-208ENST00000537429 H0YGX0 51 aa14.63□□□□□ -0.07
HMGA2-208ENST00000537429 LINC00575Q6W349 94 aa14.62□□□□□ -0.07
HMGA2-208ENST00000537429 TAX1BP3O14907 124 aa14.59□□□□□ -0.07
HMGA2-208ENST00000537429 COX6CP09669 75 aa14.59□□□□□ -0.07
HMGA2-208ENST00000537429 SLC25A20O43772 301 aa14.57□□□□□ -0.08
HMGA2-208ENST00000537429 NAA38Q9BRA0 125 aaKnown RBP14.57□□□□□ -0.08
HMGA2-208ENST00000537429 COL5A1-AS1Q5SY13 56 aa14.56□□□□□ -0.08
HMGA2-208ENST00000537429 FAM218AQ96MZ4 157 aa14.56□□□□□ -0.08
HMGA2-208ENST00000537429 hADV29S1A0JD25 119 aa14.56□□□□□ -0.08
HMGA2-208ENST00000537429 C9orf118A6NHY6 69 aa14.54□□□□□ -0.08
HMGA2-208ENST00000537429 KRTAP1-4P0C5Y4 121 aa14.53□□□□□ -0.08
HMGA2-208ENST00000537429 SCGB1C2P0DMR2 95 aa14.53□□□□□ -0.08
HMGA2-208ENST00000537429 CLEC2BQ92478 149 aa14.53□□□□□ -0.08
HMGA2-208ENST00000537429 SPRR4Q96PI1 79 aa14.53□□□□□ -0.08
HMGA2-208ENST00000537429 ABCA13Q86UQ4 5058 aa14.52□□□□□ -0.08
HMGA2-208ENST00000537429 FLG2Q5D862 2391 aaPredicted RBP14.52□□□□□ -0.08
HMGA2-208ENST00000537429 H3BUT2 72 aa14.52□□□□□ -0.08
HMGA2-208ENST00000537429 ST20-AS1Q8NBB2 130 aa14.52□□□□□ -0.08
HMGA2-208ENST00000537429 ZNF706Q9Y5V0 76 aaPredicted RBP14.52□□□□□ -0.08
HMGA2-208ENST00000537429 A0A1B0GX51 115 aa14.51□□□□□ -0.09
HMGA2-208ENST00000537429 SNCGO76070 127 aa14.48□□□□□ -0.09
HMGA2-208ENST00000537429 Q6ZQY7 126 aa14.47□□□□□ -0.09
HMGA2-208ENST00000537429 ANAPC11Q9NYG5 84 aa14.47□□□□□ -0.09
HMGA2-208ENST00000537429 GAGE2AQ6NT46 116 aa14.46□□□□□ -0.09
HMGA2-208ENST00000537429 LINC00483Q53H64 154 aa14.46□□□□□ -0.1
HMGA2-208ENST00000537429 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.46□□□□□ -0.1
HMGA2-208ENST00000537429 LRP1Q07954 4544 aaKnown RBP14.45□□□□□ -0.1
HMGA2-208ENST00000537429 IGLV5-48A0A075B6I7 105 aa14.45□□□□□ -0.1
HMGA2-208ENST00000537429 LINC01547P58512 204 aaPredicted RBP14.45□□□□□ -0.1
HMGA2-208ENST00000537429 MYCBP2O75592 4640 aa14.45□□□□□ -0.1
HMGA2-208ENST00000537429 FAT3Q8TDW7 4589 aa14.44□□□□□ -0.1
HMGA2-208ENST00000537429 A0A1W2PPM0 123 aa14.44□□□□□ -0.1
HMGA2-208ENST00000537429 LST1O00453 97 aa14.44□□□□□ -0.1
HMGA2-208ENST00000537429 LYRM7Q5U5X0 104 aa14.44□□□□□ -0.1
HMGA2-208ENST00000537429 DEFB105AQ8NG35 78 aa14.44□□□□□ -0.1
HMGA2-208ENST00000537429 SPRR1BP22528 89 aa14.43□□□□□ -0.1
HMGA2-208ENST00000537429 TCL1BO95988 128 aa14.41□□□□□ -0.1
HMGA2-208ENST00000537429 FAM229BQ4G0N7 80 aa14.41□□□□□ -0.1
HMGA2-208ENST00000537429 LINC01600Q96MT4 127 aa14.41□□□□□ -0.1
HMGA2-208ENST00000537429 TEX49A0A1B0GTD5 131 aa14.41□□□□□ -0.1
HMGA2-208ENST00000537429 TRACP01848 142 aa14.41□□□□□ -0.1
HMGA2-208ENST00000537429 Q8N377 158 aa14.4□□□□□ -0.1
HMGA2-208ENST00000537429 A0A087X002 238 aa14.39□□□□□ -0.11
HMGA2-208ENST00000537429 TRBV20-1A0A075B6N2 111 aa14.38□□□□□ -0.11
HMGA2-208ENST00000537429 DNAL4O96015 105 aa14.38□□□□□ -0.11
HMGA2-208ENST00000537429 OXTP01178 125 aa14.38□□□□□ -0.11
HMGA2-208ENST00000537429 FABP2P12104 132 aa14.38□□□□□ -0.11
HMGA2-208ENST00000537429 CRYGAP11844 174 aa14.37□□□□□ -0.11
HMGA2-208ENST00000537429 ATXN8Q156A1 80 aa14.37□□□□□ -0.11
HMGA2-208ENST00000537429 OCIAD2Q56VL3 154 aa14.37□□□□□ -0.11
HMGA2-208ENST00000537429 PRR26Q8N8Z3 221 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms