RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 HIST1H2BCP62807 126 aa9.52□□□□□ -0.89
LTBR-206ENST00000536876 HIST2H2BEQ16778 126 aa9.52□□□□□ -0.89
LTBR-206ENST00000536876 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.52□□□□□ -0.89
LTBR-206ENST00000536876 HIST1H2BHQ93079 126 aa9.52□□□□□ -0.89
LTBR-206ENST00000536876 HIST1H2BNQ99877 126 aa9.52□□□□□ -0.89
LTBR-206ENST00000536876 HIST1H2BMQ99879 126 aa9.52□□□□□ -0.89
LTBR-206ENST00000536876 IGLV8-61A0A075B6I0 122 aa9.5□□□□□ -0.89
LTBR-206ENST00000536876 LOC107984156A0A0G2JMH3 177 aa9.5□□□□□ -0.89
LTBR-206ENST00000536876 TRBV10-2A0A0K0K1G8 114 aa9.5□□□□□ -0.89
LTBR-206ENST00000536876 LEPROTO15243 131 aa9.5□□□□□ -0.89
LTBR-206ENST00000536876 JOSD1Q15040 202 aaPredicted RBP9.5□□□□□ -0.89
LTBR-206ENST00000536876 Q6ZRX8 168 aa9.5□□□□□ -0.89
LTBR-206ENST00000536876 ARL17AQ8IVW1 177 aa9.5□□□□□ -0.89
LTBR-206ENST00000536876 SERF1AO75920 110 aa9.49□□□□□ -0.89
LTBR-206ENST00000536876 PLNP26678 52 aa9.48□□□□□ -0.89
LTBR-206ENST00000536876 S100A7L2Q5SY68 101 aa9.48□□□□□ -0.89
LTBR-206ENST00000536876 SPANXB1Q9NS25 103 aaPredicted RBP9.48□□□□□ -0.89
LTBR-206ENST00000536876 J3QQQ9 107 aa9.47□□□□□ -0.89
LTBR-206ENST00000536876 LINC00310P59036 64 aa9.47□□□□□ -0.89
LTBR-206ENST00000536876 MIEN1Q9BRT3 115 aa9.47□□□□□ -0.89
LTBR-206ENST00000536876 LEPROTL1O95214 131 aa9.46□□□□□ -0.9
LTBR-206ENST00000536876 C9orf92A6NGG3 77 aa9.45□□□□□ -0.9
LTBR-206ENST00000536876 IGLV6-57P01721 117 aa9.45□□□□□ -0.9
LTBR-206ENST00000536876 NMUP48645 174 aa9.44□□□□□ -0.9
LTBR-206ENST00000536876 HERVK_113P61574 105 aa9.44□□□□□ -0.9
LTBR-206ENST00000536876 ST20-AS1Q8NBB2 130 aa9.44□□□□□ -0.9
LTBR-206ENST00000536876 PMCHL2Q9BQD1 86 aa9.44□□□□□ -0.9
LTBR-206ENST00000536876 LIMD2Q9BT23 127 aa9.44□□□□□ -0.9
LTBR-206ENST00000536876 TRAV23DV6A0A075B6W5 121 aa9.43□□□□□ -0.9
LTBR-206ENST00000536876 DPM2O94777 84 aa9.43□□□□□ -0.9
LTBR-206ENST00000536876 NDUFC2O95298 119 aa9.43□□□□□ -0.9
LTBR-206ENST00000536876 LGALS3P17931 250 aaKnown RBP9.43□□□□□ -0.9
LTBR-206ENST00000536876 HINT1P49773 126 aaPredicted RBP9.42□□□□□ -0.9
LTBR-206ENST00000536876 SOSTDC1Q6X4U4 206 aa9.41□□□□□ -0.9
LTBR-206ENST00000536876 HSPB8Q9UJY1 196 aa9.41□□□□□ -0.9
LTBR-206ENST00000536876 C5orf52A6NGY3 159 aa9.4□□□□□ -0.9
LTBR-206ENST00000536876 ZNF73O43830 326 aaPredicted RBP9.4□□□□□ -0.9
LTBR-206ENST00000536876 EIF4EBP3O60516 100 aaPredicted RBP9.4□□□□□ -0.9
LTBR-206ENST00000536876 IGKCP01834 107 aa9.4□□□□□ -0.9
LTBR-206ENST00000536876 FABP4P15090 132 aa9.4□□□□□ -0.9
LTBR-206ENST00000536876 NPC2P61916 151 aa9.4□□□□□ -0.9
LTBR-206ENST00000536876 COA6Q5JTJ3 125 aaKnown RBP9.4□□□□□ -0.9
LTBR-206ENST00000536876 S100A6P06703 90 aa9.39□□□□□ -0.91
LTBR-206ENST00000536876 SLC25A34Q6PIV7 304 aa9.39□□□□□ -0.91
LTBR-206ENST00000536876 HRCT1Q6UXD1 115 aa9.39□□□□□ -0.91
LTBR-206ENST00000536876 CBY1Q9Y3M2 126 aa9.39□□□□□ -0.91
LTBR-206ENST00000536876 ADAMTSL4-AS1Q5T5F5 129 aa9.38□□□□□ -0.91
LTBR-206ENST00000536876 A0A0J9YXY3 114 aa9.37□□□□□ -0.91
LTBR-206ENST00000536876 TMA7Q9Y2S6 64 aaKnown RBP9.36□□□□□ -0.91
LTBR-206ENST00000536876 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.35□□□□□ -0.91
LTBR-206ENST00000536876 M0R2T5 61 aa9.34□□□□□ -0.91
LTBR-206ENST00000536876 SPRR1BP22528 89 aa9.34□□□□□ -0.91
LTBR-206ENST00000536876 LAMTOR3Q9UHA4 124 aa9.34□□□□□ -0.91
LTBR-206ENST00000536876 KRTAP9-7A8MTY7 169 aa9.33□□□□□ -0.92
LTBR-206ENST00000536876 E9PLD3 99 aa9.33□□□□□ -0.92
LTBR-206ENST00000536876 S100A2P29034 98 aa9.33□□□□□ -0.92
LTBR-206ENST00000536876 HIST3H2BBQ8N257 126 aa9.33□□□□□ -0.92
LTBR-206ENST00000536876 SNRPEP62304 92 aaKnown RBP9.32□□□□□ -0.92
LTBR-206ENST00000536876 DHRS4-AS1Q9P1J3 65 aa9.31□□□□□ -0.92
LTBR-206ENST00000536876 OR13C6PQ8NH95 151 aa9.3□□□□□ -0.92
LTBR-206ENST00000536876 LITAFQ99732 161 aa9.3□□□□□ -0.92
LTBR-206ENST00000536876 SPANXCQ9NY87 97 aa9.3□□□□□ -0.92
LTBR-206ENST00000536876 SSPOA2VEC9 5147 aa9.3□□□□□ -0.92
LTBR-206ENST00000536876 RPL37P61927 97 aaKnown RBP9.29□□□□□ -0.92
LTBR-206ENST00000536876 LINC00308Q8TCZ7 52 aa9.29□□□□□ -0.92
LTBR-206ENST00000536876 KRTDAPP60985 99 aa9.28□□□□□ -0.92
LTBR-206ENST00000536876 HIST1H2BLQ99880 126 aa9.28□□□□□ -0.92
LTBR-206ENST00000536876 TAL2Q16559 108 aa9.27□□□□□ -0.93
LTBR-206ENST00000536876 COX6B2Q6YFQ2 88 aa9.27□□□□□ -0.93
LTBR-206ENST00000536876 SYS1-DBNDD2H3BUS1 97 aa9.26□□□□□ -0.93
LTBR-206ENST00000536876 C3orf79P0CE67 100 aa9.26□□□□□ -0.93
LTBR-206ENST00000536876 CD164Q04900 197 aa9.26□□□□□ -0.93
LTBR-206ENST00000536876 PRO1933Q9H354 126 aa9.26□□□□□ -0.93
LTBR-206ENST00000536876 H7C2G1 150 aa9.25□□□□□ -0.93
LTBR-206ENST00000536876 TIMM17BO60830 172 aa9.25□□□□□ -0.93
LTBR-206ENST00000536876 SPANXDQ9BXN6 97 aa9.25□□□□□ -0.93
LTBR-206ENST00000536876 USH2AO75445 5202 aa9.24□□□□□ -0.93
LTBR-206ENST00000536876 C1orf195Q5TG92 126 aa9.24□□□□□ -0.93
LTBR-206ENST00000536876 PET117Q6UWS5 81 aa9.24□□□□□ -0.93
LTBR-206ENST00000536876 ELOF1P60002 83 aaKnown RBP9.23□□□□□ -0.93
LTBR-206ENST00000536876 DEFB105AQ8NG35 78 aa9.23□□□□□ -0.93
LTBR-206ENST00000536876 ZNF815PA8K554 130 aa9.22□□□□□ -0.93
LTBR-206ENST00000536876 COX7BP24311 80 aa9.22□□□□□ -0.93
LTBR-206ENST00000536876 Q1RN00 199 aa9.22□□□□□ -0.93
LTBR-206ENST00000536876 C6orf99Q4VX62 202 aa9.22□□□□□ -0.93
LTBR-206ENST00000536876 Q5XG85 94 aa9.22□□□□□ -0.93
LTBR-206ENST00000536876 C20orf202A1L168 122 aa9.21□□□□□ -0.94
LTBR-206ENST00000536876 LINC01545Q5VT33 79 aa9.21□□□□□ -0.94
LTBR-206ENST00000536876 TTTY13Q9BZ97 58 aa9.21□□□□□ -0.94
LTBR-206ENST00000536876 TEX49A0A1B0GTD5 131 aa9.2□□□□□ -0.94
LTBR-206ENST00000536876 AKR1D1P51857 326 aa9.2□□□□□ -0.94
LTBR-206ENST00000536876 A0A0G2JQZ4 141 aa9.19□□□□□ -0.94
LTBR-206ENST00000536876 LINC00518Q8N0U6 118 aa9.18□□□□□ -0.94
LTBR-206ENST00000536876 SMIM29Q86T20 159 aa9.17□□□□□ -0.94
LTBR-206ENST00000536876 ATOH7Q8N100 152 aa9.15□□□□□ -0.94
LTBR-206ENST00000536876 SCGB1D1O95968 90 aa9.14□□□□□ -0.95
LTBR-206ENST00000536876 TRBV7-6A0A0J9YX20 115 aa9.13□□□□□ -0.95
LTBR-206ENST00000536876 KRTAP9-8Q9BYQ0 159 aa9.13□□□□□ -0.95
LTBR-206ENST00000536876 TCL1BO95988 128 aa9.12□□□□□ -0.95
LTBR-206ENST00000536876 SCGB1D4Q6XE38 83 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms