RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 KIAA0087Q14695 138 aa5.3□□□□□ -1.56
CPSF7-216ENST00000536548 CSNK1G2-AS1Q8NCQ2 148 aa5.3□□□□□ -1.56
CPSF7-216ENST00000536548 PRO0255Q9UI72 69 aa5.3□□□□□ -1.56
CPSF7-216ENST00000536548 DNAH2Q9P225 4427 aa5.3□□□□□ -1.56
CPSF7-216ENST00000536548 FAT2Q9NYQ8 4349 aa5.29□□□□□ -1.56
CPSF7-216ENST00000536548 ERC2-IT1O76042 136 aa5.29□□□□□ -1.56
CPSF7-216ENST00000536548 IGLV1-51P01701 117 aa5.29□□□□□ -1.56
CPSF7-216ENST00000536548 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.29□□□□□ -1.56
CPSF7-216ENST00000536548 CHCHD10Q8WYQ3 142 aaPredicted RBP5.29□□□□□ -1.56
CPSF7-216ENST00000536548 PRO0628Q9UI54 55 aa5.29□□□□□ -1.56
CPSF7-216ENST00000536548 DYNC1H1Q14204 4646 aaKnown RBP5.29□□□□□ -1.56
CPSF7-216ENST00000536548 TRBV7-6A0A0J9YX20 115 aa5.28□□□□□ -1.56
CPSF7-216ENST00000536548 PRR3P79522 188 aaKnown RBP5.28□□□□□ -1.56
CPSF7-216ENST00000536548 DIRC1Q969H9 104 aa5.28□□□□□ -1.56
CPSF7-216ENST00000536548 HSPG2P98160 4391 aa5.27□□□□□ -1.57
CPSF7-216ENST00000536548 A0A0J9YWU9 116 aa5.27□□□□□ -1.57
CPSF7-216ENST00000536548 IGLV6-57P01721 117 aa5.27□□□□□ -1.57
CPSF7-216ENST00000536548 IGHV4-30-4P0DP06 118 aa5.27□□□□□ -1.57
CPSF7-216ENST00000536548 DEFB130BP0DP73 79 aa5.27□□□□□ -1.57
CPSF7-216ENST00000536548 DEFB130AP0DP74 79 aa5.27□□□□□ -1.57
CPSF7-216ENST00000536548 SPAG11BQ08648 103 aa5.27□□□□□ -1.57
CPSF7-216ENST00000536548 C19orf73Q9NVV2 129 aa5.27□□□□□ -1.57
CPSF7-216ENST00000536548 GVQW2A0A096LPI5 108 aaPredicted RBP5.26□□□□□ -1.57
CPSF7-216ENST00000536548 LYRM9A8MSI8 78 aa5.26□□□□□ -1.57
CPSF7-216ENST00000536548 F8WEM9 126 aa5.26□□□□□ -1.57
CPSF7-216ENST00000536548 COX7BP24311 80 aa5.26□□□□□ -1.57
CPSF7-216ENST00000536548 REG3AQ06141 175 aa5.26□□□□□ -1.57
CPSF7-216ENST00000536548 CLPSL2Q6UWE3 100 aa5.26□□□□□ -1.57
CPSF7-216ENST00000536548 Q6ZQY7 126 aa5.26□□□□□ -1.57
CPSF7-216ENST00000536548 LINC00269Q8N2A0 174 aa5.26□□□□□ -1.57
CPSF7-216ENST00000536548 TRAV10A0A0B4J240 114 aa5.25□□□□□ -1.57
CPSF7-216ENST00000536548 TRBV7-4A0A0J9YYF1 115 aa5.25□□□□□ -1.57
CPSF7-216ENST00000536548 ANGP03950 147 aaKnown RBP5.25□□□□□ -1.57
CPSF7-216ENST00000536548 MIFP14174 115 aa5.25□□□□□ -1.57
CPSF7-216ENST00000536548 Q8N3U1 123 aa5.25□□□□□ -1.57
CPSF7-216ENST00000536548 PKD1P98161 4303 aa5.24□□□□□ -1.57
CPSF7-216ENST00000536548 NREPQ16612 68 aa5.24□□□□□ -1.57
CPSF7-216ENST00000536548 RMI2Q96E14 147 aa5.24□□□□□ -1.57
CPSF7-216ENST00000536548 WFDC10AQ9H1F0 79 aa5.24□□□□□ -1.57
CPSF7-216ENST00000536548 DNAH11Q96DT5 4516 aa5.23□□□□□ -1.57
CPSF7-216ENST00000536548 LY6G6CO95867 125 aa5.23□□□□□ -1.57
CPSF7-216ENST00000536548 LINC00476Q8WZB0 136 aa5.23□□□□□ -1.57
CPSF7-216ENST00000536548 SNURFQ9Y675 71 aa5.23□□□□□ -1.57
CPSF7-216ENST00000536548 ZNF73O43830 326 aaPredicted RBP5.22□□□□□ -1.57
CPSF7-216ENST00000536548 ELOF1P60002 83 aaKnown RBP5.22□□□□□ -1.57
CPSF7-216ENST00000536548 C9orf116Q5BN46 136 aaPredicted RBP5.22□□□□□ -1.57
CPSF7-216ENST00000536548 UNQ6190/PRO20217Q6UXQ8 127 aa5.22□□□□□ -1.57
CPSF7-216ENST00000536548 IGLV10-54A0A075B6I4 117 aa5.21□□□□□ -1.58
CPSF7-216ENST00000536548 M0R2N4 97 aa5.21□□□□□ -1.58
CPSF7-216ENST00000536548 M0R378 163 aa5.21□□□□□ -1.58
CPSF7-216ENST00000536548 BPY2O14599 106 aa5.21□□□□□ -1.58
CPSF7-216ENST00000536548 LELP1Q5T871 98 aa5.21□□□□□ -1.58
CPSF7-216ENST00000536548 Q8NDZ9 215 aa5.21□□□□□ -1.58
CPSF7-216ENST00000536548 TMEM254Q8TBM7 123 aa5.21□□□□□ -1.58
CPSF7-216ENST00000536548 KRTAP3-3Q9BYR6 98 aa5.21□□□□□ -1.58
CPSF7-216ENST00000536548 KRTAP3-2Q9BYR7 98 aa5.21□□□□□ -1.58
CPSF7-216ENST00000536548 X6R8D5 127 aa5.21□□□□□ -1.58
CPSF7-216ENST00000536548 A0A096LPF7 62 aa5.2□□□□□ -1.58
CPSF7-216ENST00000536548 A0A1B0GW54 56 aa5.2□□□□□ -1.58
CPSF7-216ENST00000536548 TM2D3Q9BRN9 247 aa5.2□□□□□ -1.58
CPSF7-216ENST00000536548 SORL1Q92673 2214 aa5.2□□□□□ -1.58
CPSF7-216ENST00000536548 F8WDY8 70 aa5.19□□□□□ -1.58
CPSF7-216ENST00000536548 PRYO14603 147 aa5.19□□□□□ -1.58
CPSF7-216ENST00000536548 DAD1P61803 113 aa5.19□□□□□ -1.58
CPSF7-216ENST00000536548 C10orf25Q5T742 122 aa5.19□□□□□ -1.58
CPSF7-216ENST00000536548 LINC00336Q6ZUF6 198 aa5.19□□□□□ -1.58
CPSF7-216ENST00000536548 FP248Q71RG6 208 aaPredicted RBP5.19□□□□□ -1.58
CPSF7-216ENST00000536548 DNAH17Q9UFH2 4485 aa5.19□□□□□ -1.58
CPSF7-216ENST00000536548 FUSP35637 526 aaKnown RBP eCLIP5.18□□□□□ -1.58
CPSF7-216ENST00000536548 APOC4P55056 127 aa5.18□□□□□ -1.58
CPSF7-216ENST00000536548 SCXQ7RTU7 201 aa5.18□□□□□ -1.58
CPSF7-216ENST00000536548 C1orf43Q9BWL3 253 aa5.18□□□□□ -1.58
CPSF7-216ENST00000536548 PRR34Q9NV39 138 aa5.18□□□□□ -1.58
CPSF7-216ENST00000536548 A0A0U1RQV1 116 aa5.17□□□□□ -1.58
CPSF7-216ENST00000536548 IGKV4-1P06312 121 aa5.17□□□□□ -1.58
CPSF7-216ENST00000536548 HIGD2BQ4VC39 106 aa5.17□□□□□ -1.58
CPSF7-216ENST00000536548 C6orf48Q9UBA6 75 aa5.17□□□□□ -1.58
CPSF7-216ENST00000536548 VPREB1P12018 145 aa5.16□□□□□ -1.58
CPSF7-216ENST00000536548 LINC00528Q8N1L1 170 aa5.16□□□□□ -1.58
CPSF7-216ENST00000536548 OCR1Q9BZK8 76 aa5.16□□□□□ -1.58
CPSF7-216ENST00000536548 CELA1Q9UNI1 258 aa5.16□□□□□ -1.58
CPSF7-216ENST00000536548 DNAH6Q9C0G6 4158 aa5.15□□□□□ -1.58
CPSF7-216ENST00000536548 SPART-AS1P0CW21 52 aa5.15□□□□□ -1.59
CPSF7-216ENST00000536548 ESRGQ1W209 222 aa5.15□□□□□ -1.59
CPSF7-216ENST00000536548 CAMK2N2Q96S95 79 aa5.15□□□□□ -1.59
CPSF7-216ENST00000536548 KLK12Q9UKR0 248 aa5.15□□□□□ -1.59
CPSF7-216ENST00000536548 XAGE1AQ9HD64 81 aa5.14□□□□□ -1.59
CPSF7-216ENST00000536548 BRK1Q8WUW1 75 aa5.13□□□□□ -1.59
CPSF7-216ENST00000536548 RETNQ9HD89 108 aa5.13□□□□□ -1.59
CPSF7-216ENST00000536548 LINC00474Q9P2X8 69 aa5.13□□□□□ -1.59
CPSF7-216ENST00000536548 APOBP04114 4563 aaKnown RBP5.13□□□□□ -1.59
CPSF7-216ENST00000536548 C1orf195Q5TG92 126 aa5.11□□□□□ -1.59
CPSF7-216ENST00000536548 DHRS4-AS1Q9P1J3 65 aa5.11□□□□□ -1.59
CPSF7-216ENST00000536548 LRP1BQ9NZR2 4599 aa5.1□□□□□ -1.59
CPSF7-216ENST00000536548 IGLV5-48A0A075B6I7 105 aa5.1□□□□□ -1.59
CPSF7-216ENST00000536548 H3BNG1 76 aa5.1□□□□□ -1.59
CPSF7-216ENST00000536548 HTN3P15516 51 aa5.1□□□□□ -1.59
CPSF7-216ENST00000536548 DEFB135Q30KP9 77 aa5.1□□□□□ -1.59
CPSF7-216ENST00000536548 Q6ZTC4 211 aa5.1□□□□□ -1.59
CPSF7-216ENST00000536548 NKAPP1Q8N9T2 125 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms