RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 HIGD2AQ9BW72 106 aa6.73□□□□□ -1.33
TNFRSF1A-208ENST00000536194 ANAPC11Q9NYG5 84 aa6.73□□□□□ -1.33
TNFRSF1A-208ENST00000536194 PAM16Q9Y3D7 125 aa6.73□□□□□ -1.33
TNFRSF1A-208ENST00000536194 TRAV23DV6A0A075B6W5 121 aa6.72□□□□□ -1.33
TNFRSF1A-208ENST00000536194 ETDCA0A1B0GVM5 59 aa6.72□□□□□ -1.33
TNFRSF1A-208ENST00000536194 B5MCH6 92 aa6.72□□□□□ -1.33
TNFRSF1A-208ENST00000536194 PYY3Q5JQD4 70 aa6.72□□□□□ -1.33
TNFRSF1A-208ENST00000536194 SPATA45Q537H7 98 aa6.71□□□□□ -1.34
TNFRSF1A-208ENST00000536194 SMCR5Q8TEV8 140 aa6.71□□□□□ -1.34
TNFRSF1A-208ENST00000536194 C14orf144Q96I85 54 aa6.71□□□□□ -1.34
TNFRSF1A-208ENST00000536194 DLEU1O43261 78 aa6.7□□□□□ -1.34
TNFRSF1A-208ENST00000536194 ZNF73O43830 326 aaPredicted RBP6.7□□□□□ -1.34
TNFRSF1A-208ENST00000536194 S100A12P80511 92 aa6.7□□□□□ -1.34
TNFRSF1A-208ENST00000536194 Q6ZRX8 168 aa6.7□□□□□ -1.34
TNFRSF1A-208ENST00000536194 LINC00518Q8N0U6 118 aa6.7□□□□□ -1.34
TNFRSF1A-208ENST00000536194 OR13C6PQ8NH95 151 aa6.7□□□□□ -1.34
TNFRSF1A-208ENST00000536194 Q9BRP9 147 aa6.7□□□□□ -1.34
TNFRSF1A-208ENST00000536194 VAMP8Q9BV40 100 aa6.7□□□□□ -1.34
TNFRSF1A-208ENST00000536194 ERC2-IT1O76042 136 aa6.69□□□□□ -1.34
TNFRSF1A-208ENST00000536194 KRTAP13-2Q52LG2 175 aa6.69□□□□□ -1.34
TNFRSF1A-208ENST00000536194 COPS9Q8WXC6 57 aa6.69□□□□□ -1.34
TNFRSF1A-208ENST00000536194 SPRR4Q96PI1 79 aa6.68□□□□□ -1.34
TNFRSF1A-208ENST00000536194 RPL13AP40429 203 aaKnown RBP6.67□□□□□ -1.34
TNFRSF1A-208ENST00000536194 C2orf91Q6ZV80 131 aa6.67□□□□□ -1.34
TNFRSF1A-208ENST00000536194 A4D1N5 150 aa6.66□□□□□ -1.34
TNFRSF1A-208ENST00000536194 CRYGAP11844 174 aa6.66□□□□□ -1.34
TNFRSF1A-208ENST00000536194 FAM229BQ4G0N7 80 aa6.66□□□□□ -1.34
TNFRSF1A-208ENST00000536194 A6NDN8 102 aa6.65□□□□□ -1.34
TNFRSF1A-208ENST00000536194 C6orf99Q4VX62 202 aa6.65□□□□□ -1.34
TNFRSF1A-208ENST00000536194 SLC25A34Q6PIV7 304 aa6.65□□□□□ -1.34
TNFRSF1A-208ENST00000536194 CBY1Q9Y3M2 126 aa6.65□□□□□ -1.34
TNFRSF1A-208ENST00000536194 C3orf22Q8N5N4 141 aa6.64□□□□□ -1.35
TNFRSF1A-208ENST00000536194 HIST1H4GQ99525 98 aa6.64□□□□□ -1.35
TNFRSF1A-208ENST00000536194 HIGD1BQ9P298 99 aa6.64□□□□□ -1.35
TNFRSF1A-208ENST00000536194 TRAV13-2A0A0B4J235 113 aa6.63□□□□□ -1.35
TNFRSF1A-208ENST00000536194 ELOF1P60002 83 aaKnown RBP6.63□□□□□ -1.35
TNFRSF1A-208ENST00000536194 TYMSOSQ8TAI1 123 aa6.63□□□□□ -1.35
TNFRSF1A-208ENST00000536194 ZNF706Q9Y5V0 76 aaPredicted RBP6.63□□□□□ -1.35
TNFRSF1A-208ENST00000536194 HINT1P49773 126 aaPredicted RBP6.62□□□□□ -1.35
TNFRSF1A-208ENST00000536194 LINC00483Q53H64 154 aa6.62□□□□□ -1.35
TNFRSF1A-208ENST00000536194 ST20-AS1Q8NBB2 130 aa6.62□□□□□ -1.35
TNFRSF1A-208ENST00000536194 SMIM11BQ8TCY0 68 aa6.62□□□□□ -1.35
TNFRSF1A-208ENST00000536194 C12orf57Q99622 126 aa6.62□□□□□ -1.35
TNFRSF1A-208ENST00000536194 COX7BP24311 80 aa6.61□□□□□ -1.35
TNFRSF1A-208ENST00000536194 GAGE2AQ6NT46 116 aa6.61□□□□□ -1.35
TNFRSF1A-208ENST00000536194 TRBV7-6A0A0J9YX20 115 aa6.6□□□□□ -1.35
TNFRSF1A-208ENST00000536194 HMCN2Q8NDA2 5059 aa6.59□□□□□ -1.35
TNFRSF1A-208ENST00000536194 DHRS4-AS1Q9P1J3 65 aa6.59□□□□□ -1.35
TNFRSF1A-208ENST00000536194 A0A1B0GWB2 263 aa6.58□□□□□ -1.36
TNFRSF1A-208ENST00000536194 CFC1BP0CG36 223 aa6.58□□□□□ -1.36
TNFRSF1A-208ENST00000536194 CFC1P0CG37 223 aa6.58□□□□□ -1.36
TNFRSF1A-208ENST00000536194 TSPAN13O95857 204 aa6.57□□□□□ -1.36
TNFRSF1A-208ENST00000536194 TAL2Q16559 108 aa6.57□□□□□ -1.36
TNFRSF1A-208ENST00000536194 CEND1Q8N111 149 aa6.57□□□□□ -1.36
TNFRSF1A-208ENST00000536194 FXYD2P54710 66 aa6.56□□□□□ -1.36
TNFRSF1A-208ENST00000536194 LINC00304Q8N9R0 145 aa6.56□□□□□ -1.36
TNFRSF1A-208ENST00000536194 IGLV9-49A0A0B4J1Y8 123 aa6.55□□□□□ -1.36
TNFRSF1A-208ENST00000536194 SPRR1BP22528 89 aa6.55□□□□□ -1.36
TNFRSF1A-208ENST00000536194 A0A0B4J2C4 111 aa6.54□□□□□ -1.36
TNFRSF1A-208ENST00000536194 MOBPQ13875 183 aa6.54□□□□□ -1.36
TNFRSF1A-208ENST00000536194 Q8NBF4 154 aa6.54□□□□□ -1.36
TNFRSF1A-208ENST00000536194 UQCR10Q9UDW1 63 aa6.54□□□□□ -1.36
TNFRSF1A-208ENST00000536194 H7C2G1 150 aa6.53□□□□□ -1.36
TNFRSF1A-208ENST00000536194 LINC01547P58512 204 aaPredicted RBP6.53□□□□□ -1.36
TNFRSF1A-208ENST00000536194 HSD52Q0P140 79 aa6.53□□□□□ -1.36
TNFRSF1A-208ENST00000536194 LINC00575Q6W349 94 aa6.53□□□□□ -1.36
TNFRSF1A-208ENST00000536194 LOC105371267A0A1B0GV96 52 aa6.52□□□□□ -1.37
TNFRSF1A-208ENST00000536194 RAB37Q96AX2 223 aa6.52□□□□□ -1.37
TNFRSF1A-208ENST00000536194 IGLV5-48A0A075B6I7 105 aa6.51□□□□□ -1.37
TNFRSF1A-208ENST00000536194 SMIM6P0DI80 62 aa6.51□□□□□ -1.37
TNFRSF1A-208ENST00000536194 DEFB105AQ8NG35 78 aa6.51□□□□□ -1.37
TNFRSF1A-208ENST00000536194 PRO1933Q9H354 126 aa6.51□□□□□ -1.37
TNFRSF1A-208ENST00000536194 TMEM238LA0A1B0GVL6 79 aa6.5□□□□□ -1.37
TNFRSF1A-208ENST00000536194 A6NJY4 79 aa6.5□□□□□ -1.37
TNFRSF1A-208ENST00000536194 VAMP3Q15836 100 aa6.5□□□□□ -1.37
TNFRSF1A-208ENST00000536194 SSBP3-AS1Q7Z2R9 100 aa6.5□□□□□ -1.37
TNFRSF1A-208ENST00000536194 SMIM29Q86T20 159 aa6.5□□□□□ -1.37
TNFRSF1A-208ENST00000536194 TEX49A0A1B0GTD5 131 aa6.49□□□□□ -1.37
TNFRSF1A-208ENST00000536194 Q1RN00 199 aa6.49□□□□□ -1.37
TNFRSF1A-208ENST00000536194 BVES-AS1Q5T3Y7 98 aa6.49□□□□□ -1.37
TNFRSF1A-208ENST00000536194 C9orf153Q5TBE3 101 aa6.49□□□□□ -1.37
TNFRSF1A-208ENST00000536194 SPAG11AQ6PDA7 123 aa6.49□□□□□ -1.37
TNFRSF1A-208ENST00000536194 RETNLBQ9BQ08 111 aa6.49□□□□□ -1.37
TNFRSF1A-208ENST00000536194 NHP2Q9NX24 153 aaKnown RBP6.49□□□□□ -1.37
TNFRSF1A-208ENST00000536194 PRO1854Q9UHT4 67 aa6.49□□□□□ -1.37
TNFRSF1A-208ENST00000536194 hADV29S1A0JD25 119 aa6.48□□□□□ -1.37
TNFRSF1A-208ENST00000536194 K7ERJ3 54 aa6.48□□□□□ -1.37
TNFRSF1A-208ENST00000536194 CTAG1AP78358 180 aa6.48□□□□□ -1.37
TNFRSF1A-208ENST00000536194 Q8N377 158 aa6.48□□□□□ -1.37
TNFRSF1A-208ENST00000536194 SLC25A20O43772 301 aa6.47□□□□□ -1.37
TNFRSF1A-208ENST00000536194 PRR4Q16378 134 aa6.47□□□□□ -1.37
TNFRSF1A-208ENST00000536194 Q6ZQY7 126 aa6.47□□□□□ -1.37
TNFRSF1A-208ENST00000536194 FAM218AQ96MZ4 157 aa6.47□□□□□ -1.37
TNFRSF1A-208ENST00000536194 LAMTOR3Q9UHA4 124 aa6.47□□□□□ -1.37
TNFRSF1A-208ENST00000536194 LPAP08519 4548 aa6.45□□□□□ -1.38
TNFRSF1A-208ENST00000536194 TRIAP1O43715 76 aa6.45□□□□□ -1.38
TNFRSF1A-208ENST00000536194 SPINK1P00995 79 aa6.45□□□□□ -1.38
TNFRSF1A-208ENST00000536194 C4orf48Q5BLP8 95 aa6.45□□□□□ -1.38
TNFRSF1A-208ENST00000536194 LRP2P98164 4655 aa6.44□□□□□ -1.38
TNFRSF1A-208ENST00000536194 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms