RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 SERTAD4-AS1Q5TG53 156 aa10.45□□□□□ -0.74
CHMP1A-202ENST00000535997 C7orf33Q8WU49 177 aa10.45□□□□□ -0.74
CHMP1A-202ENST00000535997 FLNBO75369 2602 aaKnown RBP10.44□□□□□ -0.74
CHMP1A-202ENST00000535997 J3KT08 172 aa10.43□□□□□ -0.74
CHMP1A-202ENST00000535997 MRAPQ8TCY5 172 aa10.43□□□□□ -0.74
CHMP1A-202ENST00000535997 LINC00588Q9Y4M8 146 aa10.43□□□□□ -0.74
CHMP1A-202ENST00000535997 TRAV7A0A075B6U4 112 aa10.42□□□□□ -0.74
CHMP1A-202ENST00000535997 DHRS4-AS1Q9P1J3 65 aa10.4□□□□□ -0.74
CHMP1A-202ENST00000535997 NOTCH1P46531 2555 aa10.4□□□□□ -0.74
CHMP1A-202ENST00000535997 IGLV5-37A0A075B6J1 123 aa10.4□□□□□ -0.75
CHMP1A-202ENST00000535997 LOC107984640A0A0U1RRK4 108 aa10.4□□□□□ -0.75
CHMP1A-202ENST00000535997 MAST4O15021 2626 aa10.39□□□□□ -0.75
CHMP1A-202ENST00000535997 Q8N377 158 aa10.39□□□□□ -0.75
CHMP1A-202ENST00000535997 DPH3Q96FX2 82 aa10.39□□□□□ -0.75
CHMP1A-202ENST00000535997 C20orf197Q8N268 126 aa10.38□□□□□ -0.75
CHMP1A-202ENST00000535997 RMI2Q96E14 147 aa10.38□□□□□ -0.75
CHMP1A-202ENST00000535997 IGLV1-50A0A075B6I6 118 aa10.38□□□□□ -0.75
CHMP1A-202ENST00000535997 IGLV5-48A0A075B6I7 105 aa10.38□□□□□ -0.75
CHMP1A-202ENST00000535997 Q6ZRX8 168 aa10.38□□□□□ -0.75
CHMP1A-202ENST00000535997 BAHCC1Q9P281 2608 aa10.38□□□□□ -0.75
CHMP1A-202ENST00000535997 KRTAP4-16G5E9R7 235 aaPredicted RBP10.37□□□□□ -0.75
CHMP1A-202ENST00000535997 PRYO14603 147 aa10.37□□□□□ -0.75
CHMP1A-202ENST00000535997 DEFB105AQ8NG35 78 aa10.37□□□□□ -0.75
CHMP1A-202ENST00000535997 SPRR1AP35321 89 aa10.36□□□□□ -0.75
CHMP1A-202ENST00000535997 TM2D3Q9BRN9 247 aa10.36□□□□□ -0.75
CHMP1A-202ENST00000535997 RPL37AP8A6NKH3 93 aa10.36□□□□□ -0.75
CHMP1A-202ENST00000535997 CASC10Q5T4H9 136 aa10.36□□□□□ -0.75
CHMP1A-202ENST00000535997 SCXQ7RTU7 201 aa10.36□□□□□ -0.75
CHMP1A-202ENST00000535997 NREPQ16612 68 aa10.35□□□□□ -0.75
CHMP1A-202ENST00000535997 FAM168BA1KXE4 195 aa10.35□□□□□ -0.75
CHMP1A-202ENST00000535997 A0A1B0GW54 56 aa10.34□□□□□ -0.75
CHMP1A-202ENST00000535997 DNAH1Q9P2D7 4330 aa10.34□□□□□ -0.75
CHMP1A-202ENST00000535997 ETDCA0A1B0GVM5 59 aa10.33□□□□□ -0.76
CHMP1A-202ENST00000535997 Q9BRP9 147 aa10.33□□□□□ -0.76
CHMP1A-202ENST00000535997 KLKP1Q107X0 134 aa10.32□□□□□ -0.76
CHMP1A-202ENST00000535997 KRTAP7-1Q8IUC3 87 aa10.32□□□□□ -0.76
CHMP1A-202ENST00000535997 FAM19A5Q7Z5A7 132 aaPredicted RBP10.31□□□□□ -0.76
CHMP1A-202ENST00000535997 NBEAL1Q6ZS30 2694 aa10.31□□□□□ -0.76
CHMP1A-202ENST00000535997 MRPL55Q7Z7F7 128 aaKnown RBP10.31□□□□□ -0.76
CHMP1A-202ENST00000535997 PRB2P02812 416 aaPredicted RBP10.3□□□□□ -0.76
CHMP1A-202ENST00000535997 C3orf84H3BNL1 204 aa10.29□□□□□ -0.76
CHMP1A-202ENST00000535997 FUSP35637 526 aaKnown RBP eCLIP10.29□□□□□ -0.76
CHMP1A-202ENST00000535997 H7BZZ5 65 aa10.28□□□□□ -0.76
CHMP1A-202ENST00000535997 BPY2O14599 106 aa10.28□□□□□ -0.76
CHMP1A-202ENST00000535997 HUWE1Q7Z6Z7 4374 aaKnown RBP10.28□□□□□ -0.76
CHMP1A-202ENST00000535997 COL6A5A8TX70 2615 aa10.28□□□□□ -0.76
CHMP1A-202ENST00000535997 TNP2Q05952 138 aa10.28□□□□□ -0.76
CHMP1A-202ENST00000535997 IGKV4-1P06312 121 aa10.27□□□□□ -0.76
CHMP1A-202ENST00000535997 K7EIL1 84 aa10.27□□□□□ -0.77
CHMP1A-202ENST00000535997 C1orf137Q5JT78 98 aa10.26□□□□□ -0.77
CHMP1A-202ENST00000535997 ST20-AS1Q8NBB2 130 aa10.26□□□□□ -0.77
CHMP1A-202ENST00000535997 Q8N9L7 120 aa10.25□□□□□ -0.77
CHMP1A-202ENST00000535997 A0A1W2PNM2 257 aa10.24□□□□□ -0.77
CHMP1A-202ENST00000535997 C5orf47Q569G3 176 aa10.24□□□□□ -0.77
CHMP1A-202ENST00000535997 FAM236DA0A1B0GTK5 79 aa10.23□□□□□ -0.77
CHMP1A-202ENST00000535997 ERC2-IT1O76042 136 aa10.23□□□□□ -0.77
CHMP1A-202ENST00000535997 FAM236CP0DP71 79 aa10.23□□□□□ -0.77
CHMP1A-202ENST00000535997 REG3GQ6UW15 175 aa10.23□□□□□ -0.77
CHMP1A-202ENST00000535997 UBE2BP63146 152 aa10.23□□□□□ -0.77
CHMP1A-202ENST00000535997 SNURFQ9Y675 71 aa10.23□□□□□ -0.77
CHMP1A-202ENST00000535997 NDUFC1O43677 76 aa10.22□□□□□ -0.77
CHMP1A-202ENST00000535997 Q8NBF4 154 aa10.22□□□□□ -0.77
CHMP1A-202ENST00000535997 SPRR4Q96PI1 79 aa10.22□□□□□ -0.77
CHMP1A-202ENST00000535997 OXTP01178 125 aa10.22□□□□□ -0.77
CHMP1A-202ENST00000535997 OCR1Q9BZK8 76 aa10.19□□□□□ -0.78
CHMP1A-202ENST00000535997 C16orf90A8MZG2 172 aa10.18□□□□□ -0.78
CHMP1A-202ENST00000535997 CNBPP62633 177 aaKnown RBP10.18□□□□□ -0.78
CHMP1A-202ENST00000535997 TMEM254Q8TBM7 123 aa10.18□□□□□ -0.78
CHMP1A-202ENST00000535997 F8WEM9 126 aa10.17□□□□□ -0.78
CHMP1A-202ENST00000535997 SMIM29Q86T20 159 aa10.17□□□□□ -0.78
CHMP1A-202ENST00000535997 SERP1Q9Y6X1 66 aa10.16□□□□□ -0.78
CHMP1A-202ENST00000535997 A0A096LNI7 61 aa10.16□□□□□ -0.78
CHMP1A-202ENST00000535997 KRTAP1-5Q9BYS1 174 aa10.16□□□□□ -0.78
CHMP1A-202ENST00000535997 EPM2AB3EWF7 344 aa10.14□□□□□ -0.79
CHMP1A-202ENST00000535997 PSCAO43653 123 aa10.14□□□□□ -0.79
CHMP1A-202ENST00000535997 MGAM2Q2M2H8 2515 aa10.14□□□□□ -0.79
CHMP1A-202ENST00000535997 DNAH10Q8IVF4 4471 aa10.14□□□□□ -0.79
CHMP1A-202ENST00000535997 A0A1W2PNN7 141 aa10.13□□□□□ -0.79
CHMP1A-202ENST00000535997 IGKV2-24A0A0C4DH68 120 aa10.12□□□□□ -0.79
CHMP1A-202ENST00000535997 LINC00476Q8WZB0 136 aa10.12□□□□□ -0.79
CHMP1A-202ENST00000535997 STAB2Q8WWQ8 2551 aa10.11□□□□□ -0.79
CHMP1A-202ENST00000535997 C14orf177Q52M58 125 aa10.1□□□□□ -0.79
CHMP1A-202ENST00000535997 LYSTQ99698 3801 aa10.1□□□□□ -0.79
CHMP1A-202ENST00000535997 ATP5EP56381 51 aaPredicted RBP10.1□□□□□ -0.79
CHMP1A-202ENST00000535997 DSCR10P59022 87 aa10.1□□□□□ -0.79
CHMP1A-202ENST00000535997 DNAH9Q9NYC9 4486 aa10.09□□□□□ -0.79
CHMP1A-202ENST00000535997 A0A0U1RQV1 116 aa10.09□□□□□ -0.79
CHMP1A-202ENST00000535997 PRLHP81277 87 aa10.09□□□□□ -0.79
CHMP1A-202ENST00000535997 UBE2DNLQ8IWF7 75 aa10.09□□□□□ -0.79
CHMP1A-202ENST00000535997 APLNQ9ULZ1 77 aa10.09□□□□□ -0.79
CHMP1A-202ENST00000535997 IGLV8-61A0A075B6I0 122 aa10.08□□□□□ -0.8
CHMP1A-202ENST00000535997 Q5XG85 94 aa10.08□□□□□ -0.8
CHMP1A-202ENST00000535997 COL7A1Q02388 2944 aa10.08□□□□□ -0.8
CHMP1A-202ENST00000535997 IGFL1Q6UW32 110 aa10.08□□□□□ -0.8
CHMP1A-202ENST00000535997 HIGD2AQ9BW72 106 aa10.06□□□□□ -0.8
CHMP1A-202ENST00000535997 C4orf26Q17RF5 130 aa10.05□□□□□ -0.8
CHMP1A-202ENST00000535997 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.04□□□□□ -0.8
CHMP1A-202ENST00000535997 H0Y9J4 135 aa10.04□□□□□ -0.8
CHMP1A-202ENST00000535997 K7EQZ3 153 aa10.04□□□□□ -0.8
CHMP1A-202ENST00000535997 LCE6AA0A183 80 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms