RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 NSD3Q9BZ95 1437 aa0.02□□□□□ -2.41
PRKDC-205ENST00000535375 PKD1L3Q7Z443 1732 aa0.01□□□□□ -2.41
PRKDC-205ENST00000535375 LCE6AA0A183 80 aa0.01□□□□□ -2.41
PRKDC-205ENST00000535375 GNG11P61952 73 aa0.01□□□□□ -2.41
PRKDC-205ENST00000535375 UQCR10Q9UDW1 63 aa0.01□□□□□ -2.41
PRKDC-205ENST00000535375 KDM5DQ9BY66 1539 aa0.01□□□□□ -2.41
PRKDC-205ENST00000535375 TTC37Q6PGP7 1564 aa0.01□□□□□ -2.41
PRKDC-205ENST00000535375 DNMBPQ6XZF7 1577 aa0.01□□□□□ -2.41
PRKDC-205ENST00000535375 TARBP1Q13395 1621 aaKnown RBP0.01□□□□□ -2.41
PRKDC-205ENST00000535375 FMN2Q9NZ56 1722 aa0.01□□□□□ -2.41
PRKDC-205ENST00000535375 C10orf142B7Z368 130 aa0□□□□□ -2.41
PRKDC-205ENST00000535375 IGLC1P0CG04 106 aa0□□□□□ -2.41
PRKDC-205ENST00000535375 S100A3P33764 101 aa0□□□□□ -2.41
PRKDC-205ENST00000535375 Q5VSD8 79 aa0□□□□□ -2.41
PRKDC-205ENST00000535375 A0A0G2JMZ2 1700 aa-0.01□□□□□ -2.41
PRKDC-205ENST00000535375 ARHGAP5Q13017 1502 aa-0.01□□□□□ -2.41
PRKDC-205ENST00000535375 ASXL1Q8IXJ9 1541 aa-0.01□□□□□ -2.41
PRKDC-205ENST00000535375 MGPP08493 103 aa-0.01□□□□□ -2.41
PRKDC-205ENST00000535375 Q0VG73 95 aa-0.01□□□□□ -2.41
PRKDC-205ENST00000535375 TMEM263Q8WUH6 116 aaKnown RBP-0.01□□□□□ -2.41
PRKDC-205ENST00000535375 DIP2CQ9Y2E4 1556 aa-0.02□□□□□ -2.41
PRKDC-205ENST00000535375 MAST1Q9Y2H9 1570 aa-0.02□□□□□ -2.41
PRKDC-205ENST00000535375 FAM223AQ8IWN6 122 aa-0.02□□□□□ -2.41
PRKDC-205ENST00000535375 SPRR2FQ96RM1 72 aa-0.02□□□□□ -2.41
PRKDC-205ENST00000535375 DOT1LQ8TEK3 1739 aa-0.02□□□□□ -2.41
PRKDC-205ENST00000535375 CFDP00746 253 aaPredicted RBP-0.03□□□□□ -2.41
PRKDC-205ENST00000535375 HSD52Q0P140 79 aa-0.03□□□□□ -2.41
PRKDC-205ENST00000535375 ARL2-SNX15V9GYD0 113 aa-0.03□□□□□ -2.41
PRKDC-205ENST00000535375 ADGRL2O95490 1459 aa-0.03□□□□□ -2.41
PRKDC-205ENST00000535375 NAP1L6A6NFF2 107 aa-0.04□□□□□ -2.42
PRKDC-205ENST00000535375 TMEM262E9PQX1 116 aa-0.04□□□□□ -2.42
PRKDC-205ENST00000535375 WHAMMP3Q1A5X7 153 aa-0.04□□□□□ -2.42
PRKDC-205ENST00000535375 MANBALQ9NQG1 85 aa-0.04□□□□□ -2.42
PRKDC-205ENST00000535375 RGPD8O14715 1765 aaPredicted RBP-0.04□□□□□ -2.42
PRKDC-205ENST00000535375 RGPD5Q99666 1765 aa-0.04□□□□□ -2.42
PRKDC-205ENST00000535375 C1orf167Q5SNV9 1468 aa-0.04□□□□□ -2.42
PRKDC-205ENST00000535375 MLH3Q9UHC1 1453 aa-0.04□□□□□ -2.42
PRKDC-205ENST00000535375 ABCC5O15440 1437 aa-0.04□□□□□ -2.42
PRKDC-205ENST00000535375 ABCA6Q8N139 1617 aa-0.05□□□□□ -2.42
PRKDC-205ENST00000535375 TRBV6-1A0A0K0K1D8 114 aa-0.05□□□□□ -2.42
PRKDC-205ENST00000535375 COX6CP09669 75 aa-0.05□□□□□ -2.42
PRKDC-205ENST00000535375 PRO1854Q9UHT4 67 aa-0.05□□□□□ -2.42
PRKDC-205ENST00000535375 ZFYVE16Q7Z3T8 1539 aa-0.05□□□□□ -2.42
PRKDC-205ENST00000535375 C3P01024 1663 aa-0.05□□□□□ -2.42
PRKDC-205ENST00000535375 PLCH1Q4KWH8 1693 aa-0.05□□□□□ -2.42
PRKDC-205ENST00000535375 ITSN2Q9NZM3 1697 aa-0.05□□□□□ -2.42
PRKDC-205ENST00000535375 ITSN1Q15811 1721 aa-0.06□□□□□ -2.42
PRKDC-205ENST00000535375 C20orf202A1L168 122 aa-0.06□□□□□ -2.42
PRKDC-205ENST00000535375 SPRR1AP35321 89 aa-0.06□□□□□ -2.42
PRKDC-205ENST00000535375 DEFB109BQ30KR1 87 aa-0.06□□□□□ -2.42
PRKDC-205ENST00000535375 C10orf113Q5VZT2 155 aa-0.06□□□□□ -2.42
PRKDC-205ENST00000535375 GTF2H5Q6ZYL4 71 aa-0.06□□□□□ -2.42
PRKDC-205ENST00000535375 FAIMQ9NVQ4 179 aa-0.06□□□□□ -2.42
PRKDC-205ENST00000535375 LY75O60449 1722 aa-0.07□□□□□ -2.42
PRKDC-205ENST00000535375 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.07□□□□□ -2.42
PRKDC-205ENST00000535375 NHSQ6T4R5 1651 aa-0.07□□□□□ -2.42
PRKDC-205ENST00000535375 NKTRP30414 1462 aaKnown RBP-0.07□□□□□ -2.42
PRKDC-205ENST00000535375 MAGI1Q96QZ7 1491 aaPredicted RBP-0.07□□□□□ -2.42
PRKDC-205ENST00000535375 S100PP25815 95 aa-0.07□□□□□ -2.42
PRKDC-205ENST00000535375 PIGYQ3MUY2 71 aa-0.07□□□□□ -2.42
PRKDC-205ENST00000535375 MYO7BQ6PIF6 2116 aa-0.07□□□□□ -2.42
PRKDC-205ENST00000535375 ABCA8O94911 1581 aa-0.07□□□□□ -2.42
PRKDC-205ENST00000535375 SNCAP37840 140 aa-0.08□□□□□ -2.42
PRKDC-205ENST00000535375 ARHGEF12Q9NZN5 1544 aa-0.08□□□□□ -2.42
PRKDC-205ENST00000535375 BTAF1O14981 1849 aa-0.08□□□□□ -2.42
PRKDC-205ENST00000535375 LTN1O94822 1766 aa-0.09□□□□□ -2.42
PRKDC-205ENST00000535375 PTPN23Q9H3S7 1636 aa-0.09□□□□□ -2.42
PRKDC-205ENST00000535375 TEX14Q8IWB6 1497 aa-0.09□□□□□ -2.42
PRKDC-205ENST00000535375 C14orf144Q96I85 54 aa-0.09□□□□□ -2.42
PRKDC-205ENST00000535375 CGREF1Q99674 301 aa-0.09□□□□□ -2.42
PRKDC-205ENST00000535375 TOPAZ1Q8N9V7 1692 aa-0.09□□□□□ -2.42
PRKDC-205ENST00000535375 USF3Q68DE3 2245 aa-0.09□□□□□ -2.42
PRKDC-205ENST00000535375 PRDM15P57071 1507 aaPredicted RBP-0.09□□□□□ -2.42
PRKDC-205ENST00000535375 TCHHQ07283 1943 aa-0.1□□□□□ -2.43
PRKDC-205ENST00000535375 hADV29S1A0JD25 119 aa-0.1□□□□□ -2.43
PRKDC-205ENST00000535375 FAM223BA6NKX1 122 aa-0.1□□□□□ -2.43
PRKDC-205ENST00000535375 TRAPPC2P0DI81 140 aa-0.1□□□□□ -2.43
PRKDC-205ENST00000535375 TRAPPC2BP0DI82 140 aa-0.1□□□□□ -2.43
PRKDC-205ENST00000535375 SFTA2Q6UW10 78 aa-0.1□□□□□ -2.43
PRKDC-205ENST00000535375 LRRC37AA6NMS7 1700 aa-0.1□□□□□ -2.43
PRKDC-205ENST00000535375 SCN7AQ01118 1682 aa-0.11□□□□□ -2.43
PRKDC-205ENST00000535375 CRYM-AS1A6NIL9 109 aa-0.11□□□□□ -2.43
PRKDC-205ENST00000535375 SAA2P0DJI9 122 aaPredicted RBP-0.11□□□□□ -2.43
PRKDC-205ENST00000535375 KRTDAPP60985 99 aa-0.11□□□□□ -2.43
PRKDC-205ENST00000535375 UBA52P62987 128 aaKnown RBP-0.11□□□□□ -2.43
PRKDC-205ENST00000535375 POLR1AO95602 1720 aaPredicted RBP-0.11□□□□□ -2.43
PRKDC-205ENST00000535375 C5P01031 1676 aa-0.11□□□□□ -2.43
PRKDC-205ENST00000535375 UGGT2Q9NYU1 1516 aa-0.12□□□□□ -2.43
PRKDC-205ENST00000535375 UBR1Q8IWV7 1749 aa-0.12□□□□□ -2.43
PRKDC-205ENST00000535375 SMR3BP02814 79 aaPredicted RBP-0.12□□□□□ -2.43
PRKDC-205ENST00000535375 KRTAP6-1Q3LI64 71 aa-0.12□□□□□ -2.43
PRKDC-205ENST00000535375 LINC01600Q96MT4 127 aa-0.12□□□□□ -2.43
PRKDC-205ENST00000535375 C12orf57Q99622 126 aa-0.12□□□□□ -2.43
PRKDC-205ENST00000535375 LINC00846Q9NV44 126 aa-0.12□□□□□ -2.43
PRKDC-205ENST00000535375 POLA1P09884 1462 aaPredicted RBP-0.12□□□□□ -2.43
PRKDC-205ENST00000535375 PLEKHH2Q8IVE3 1493 aa-0.12□□□□□ -2.43
PRKDC-205ENST00000535375 GLI2P10070 1586 aa-0.12□□□□□ -2.43
PRKDC-205ENST00000535375 KIF14Q15058 1648 aa-0.13□□□□□ -2.43
PRKDC-205ENST00000535375 SUPT6HQ7KZ85 1726 aaKnown RBP-0.13□□□□□ -2.43
PRKDC-205ENST00000535375 LINC00959A0A1B0GUT2 108 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms