RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 TTTY13Q9BZ97 58 aa9.28□□□□□ -0.92
CLSTN3-204ENST00000535313 PPDPFQ9H3Y8 114 aa9.28□□□□□ -0.92
CLSTN3-204ENST00000535313 TRBV10-2A0A0K0K1G8 114 aa9.27□□□□□ -0.93
CLSTN3-204ENST00000535313 DDTP30046 118 aa9.27□□□□□ -0.93
CLSTN3-204ENST00000535313 Q8NBF4 154 aa9.27□□□□□ -0.93
CLSTN3-204ENST00000535313 C20orf202A1L168 122 aa9.25□□□□□ -0.93
CLSTN3-204ENST00000535313 B5MCH6 92 aa9.25□□□□□ -0.93
CLSTN3-204ENST00000535313 GAGE2AQ6NT46 116 aa9.25□□□□□ -0.93
CLSTN3-204ENST00000535313 SPANXB1Q9NS25 103 aaPredicted RBP9.25□□□□□ -0.93
CLSTN3-204ENST00000535313 LINC00483Q53H64 154 aa9.24□□□□□ -0.93
CLSTN3-204ENST00000535313 S100A7L2Q5SY68 101 aa9.24□□□□□ -0.93
CLSTN3-204ENST00000535313 FP248Q71RG6 208 aaPredicted RBP9.24□□□□□ -0.93
CLSTN3-204ENST00000535313 MUC17Q685J3 4493 aa9.22□□□□□ -0.93
CLSTN3-204ENST00000535313 NDUFC2O95298 119 aa9.22□□□□□ -0.93
CLSTN3-204ENST00000535313 SPINK1P00995 79 aa9.22□□□□□ -0.93
CLSTN3-204ENST00000535313 A0A0J9YXY3 114 aa9.21□□□□□ -0.94
CLSTN3-204ENST00000535313 ERC2-IT1O76042 136 aa9.21□□□□□ -0.94
CLSTN3-204ENST00000535313 Q6ZRX8 168 aa9.21□□□□□ -0.94
CLSTN3-204ENST00000535313 LITAFQ99732 161 aa9.21□□□□□ -0.94
CLSTN3-204ENST00000535313 IGLV9-49A0A0B4J1Y8 123 aa9.2□□□□□ -0.94
CLSTN3-204ENST00000535313 EIF4EBP3O60516 100 aaPredicted RBP9.2□□□□□ -0.94
CLSTN3-204ENST00000535313 IGLV6-57P01721 117 aa9.2□□□□□ -0.94
CLSTN3-204ENST00000535313 PCP2Q8IVA1 136 aa9.2□□□□□ -0.94
CLSTN3-204ENST00000535313 TRAV23DV6A0A075B6W5 121 aa9.19□□□□□ -0.94
CLSTN3-204ENST00000535313 MOBPQ13875 183 aa9.19□□□□□ -0.94
CLSTN3-204ENST00000535313 JOSD1Q15040 202 aaPredicted RBP9.19□□□□□ -0.94
CLSTN3-204ENST00000535313 ADAMTSL4-AS1Q5T5F5 129 aa9.19□□□□□ -0.94
CLSTN3-204ENST00000535313 Q9BRP9 147 aa9.19□□□□□ -0.94
CLSTN3-204ENST00000535313 FAT4Q6V0I7 4981 aa9.19□□□□□ -0.94
CLSTN3-204ENST00000535313 SCGB1D1O95968 90 aa9.18□□□□□ -0.94
CLSTN3-204ENST00000535313 NPC2P61916 151 aa9.18□□□□□ -0.94
CLSTN3-204ENST00000535313 SOSTDC1Q6X4U4 206 aa9.18□□□□□ -0.94
CLSTN3-204ENST00000535313 SSBP3-AS1Q7Z2R9 100 aa9.18□□□□□ -0.94
CLSTN3-204ENST00000535313 ZNF815PA8K554 130 aa9.17□□□□□ -0.94
CLSTN3-204ENST00000535313 PYY3Q5JQD4 70 aa9.17□□□□□ -0.94
CLSTN3-204ENST00000535313 AKR1D1P51857 326 aa9.16□□□□□ -0.94
CLSTN3-204ENST00000535313 CBY1Q9Y3M2 126 aa9.16□□□□□ -0.94
CLSTN3-204ENST00000535313 ZNF73O43830 326 aaPredicted RBP9.15□□□□□ -0.94
CLSTN3-204ENST00000535313 HINT1P49773 126 aaPredicted RBP9.14□□□□□ -0.95
CLSTN3-204ENST00000535313 RPS29P62273 56 aaKnown RBP9.14□□□□□ -0.95
CLSTN3-204ENST00000535313 KRTAP13-3Q3SY46 172 aa9.13□□□□□ -0.95
CLSTN3-204ENST00000535313 TIMM17BO60830 172 aa9.12□□□□□ -0.95
CLSTN3-204ENST00000535313 C9orf153Q5TBE3 101 aa9.12□□□□□ -0.95
CLSTN3-204ENST00000535313 SLC25A20O43772 301 aa9.11□□□□□ -0.95
CLSTN3-204ENST00000535313 SPANXCQ9NY87 97 aa9.11□□□□□ -0.95
CLSTN3-204ENST00000535313 Q8N377 158 aa9.1□□□□□ -0.95
CLSTN3-204ENST00000535313 OR13C6PQ8NH95 151 aa9.1□□□□□ -0.95
CLSTN3-204ENST00000535313 LINC00308Q8TCZ7 52 aa9.1□□□□□ -0.95
CLSTN3-204ENST00000535313 LCE2AQ5TA79 106 aaPredicted RBP9.09□□□□□ -0.95
CLSTN3-204ENST00000535313 ST20-AS1Q8NBB2 130 aa9.09□□□□□ -0.95
CLSTN3-204ENST00000535313 PAM16Q9Y3D7 125 aa9.09□□□□□ -0.95
CLSTN3-204ENST00000535313 HSBP1L1C9JCN9 74 aa9.08□□□□□ -0.96
CLSTN3-204ENST00000535313 SPANXDQ9BXN6 97 aa9.08□□□□□ -0.96
CLSTN3-204ENST00000535313 COX8AP10176 69 aa9.07□□□□□ -0.96
CLSTN3-204ENST00000535313 SPATA45Q537H7 98 aa9.07□□□□□ -0.96
CLSTN3-204ENST00000535313 ASB16-AS1Q495Z4 193 aa9.06□□□□□ -0.96
CLSTN3-204ENST00000535313 VAMP8Q9BV40 100 aa9.06□□□□□ -0.96
CLSTN3-204ENST00000535313 DHRS4-AS1Q9P1J3 65 aa9.06□□□□□ -0.96
CLSTN3-204ENST00000535313 SEC61BP60468 96 aaKnown RBP9.05□□□□□ -0.96
CLSTN3-204ENST00000535313 SLC25A34Q6PIV7 304 aa9.05□□□□□ -0.96
CLSTN3-204ENST00000535313 SCGB1D4Q6XE38 83 aa9.05□□□□□ -0.96
CLSTN3-204ENST00000535313 LOC105371267A0A1B0GV96 52 aa9.04□□□□□ -0.96
CLSTN3-204ENST00000535313 LINC00518Q8N0U6 118 aa9.04□□□□□ -0.96
CLSTN3-204ENST00000535313 C14orf144Q96I85 54 aa9.04□□□□□ -0.96
CLSTN3-204ENST00000535313 DLEU1O43261 78 aa9.03□□□□□ -0.96
CLSTN3-204ENST00000535313 C2orf91Q6ZV80 131 aa9.03□□□□□ -0.96
CLSTN3-204ENST00000535313 SPRR1BP22528 89 aa9.01□□□□□ -0.97
CLSTN3-204ENST00000535313 COX7BP24311 80 aa9.01□□□□□ -0.97
CLSTN3-204ENST00000535313 LAMTOR3Q9UHA4 124 aa9.01□□□□□ -0.97
CLSTN3-204ENST00000535313 ELOF1P60002 83 aaKnown RBP9□□□□□ -0.97
CLSTN3-204ENST00000535313 C6orf99Q4VX62 202 aa9□□□□□ -0.97
CLSTN3-204ENST00000535313 MUSTN1Q8IVN3 82 aa9□□□□□ -0.97
CLSTN3-204ENST00000535313 KRTAP9-2Q9BYQ4 174 aa9□□□□□ -0.97
CLSTN3-204ENST00000535313 COPS9Q8WXC6 57 aa8.99□□□□□ -0.97
CLSTN3-204ENST00000535313 IFITM1P13164 125 aa8.98□□□□□ -0.97
CLSTN3-204ENST00000535313 Q6ZVH6 145 aa8.98□□□□□ -0.97
CLSTN3-204ENST00000535313 LIMD2Q9BT23 127 aa8.98□□□□□ -0.97
CLSTN3-204ENST00000535313 TAL2Q16559 108 aa8.97□□□□□ -0.97
CLSTN3-204ENST00000535313 HRCT1Q6UXD1 115 aa8.97□□□□□ -0.97
CLSTN3-204ENST00000535313 XP32Q5T750 250 aa8.96□□□□□ -0.98
CLSTN3-204ENST00000535313 HIGD1BQ9P298 99 aa8.96□□□□□ -0.98
CLSTN3-204ENST00000535313 DEFB105AQ8NG35 78 aa8.95□□□□□ -0.98
CLSTN3-204ENST00000535313 TRBV7-6A0A0J9YX20 115 aa8.94□□□□□ -0.98
CLSTN3-204ENST00000535313 LINC01547P58512 204 aaPredicted RBP8.94□□□□□ -0.98
CLSTN3-204ENST00000535313 TEX49A0A1B0GTD5 131 aa8.93□□□□□ -0.98
CLSTN3-204ENST00000535313 A6NDN8 102 aa8.93□□□□□ -0.98
CLSTN3-204ENST00000535313 Q1RN00 199 aa8.93□□□□□ -0.98
CLSTN3-204ENST00000535313 KRTAP4-1Q9BYQ7 146 aa8.93□□□□□ -0.98
CLSTN3-204ENST00000535313 A0A1B0GWB2 263 aa8.92□□□□□ -0.98
CLSTN3-204ENST00000535313 A4D1N5 150 aa8.92□□□□□ -0.98
CLSTN3-204ENST00000535313 SMIM6P0DI80 62 aa8.92□□□□□ -0.98
CLSTN3-204ENST00000535313 PRO1933Q9H354 126 aa8.92□□□□□ -0.98
CLSTN3-204ENST00000535313 CD164Q04900 197 aa8.9□□□□□ -0.98
CLSTN3-204ENST00000535313 HIST1H4GQ99525 98 aa8.9□□□□□ -0.98
CLSTN3-204ENST00000535313 H7C2G1 150 aa8.89□□□□□ -0.99
CLSTN3-204ENST00000535313 C12orf57Q99622 126 aa8.88□□□□□ -0.99
CLSTN3-204ENST00000535313 TRAV13-2A0A0B4J235 113 aa8.87□□□□□ -0.99
CLSTN3-204ENST00000535313 IGLV5-48A0A075B6I7 105 aa8.86□□□□□ -0.99
CLSTN3-204ENST00000535313 FXYD2P54710 66 aa8.86□□□□□ -0.99
CLSTN3-204ENST00000535313 SMIM29Q86T20 159 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms