RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 TRBV7-4A0A0J9YYF1 115 aa4.24□□□□□ -1.73
UBQLN1-206ENST00000533705 C8orf87E5RJ46 101 aa4.24□□□□□ -1.73
UBQLN1-206ENST00000533705 H3BPC8 53 aa4.24□□□□□ -1.73
UBQLN1-206ENST00000533705 LINC00304Q8N9R0 145 aa4.24□□□□□ -1.73
UBQLN1-206ENST00000533705 TM2D3Q9BRN9 247 aa4.24□□□□□ -1.73
UBQLN1-206ENST00000533705 PCSK5Q92824 1860 aa4.23□□□□□ -1.73
UBQLN1-206ENST00000533705 SMCPP49901 116 aaPredicted RBP4.23□□□□□ -1.73
UBQLN1-206ENST00000533705 PRR34Q9NV39 138 aa4.23□□□□□ -1.73
UBQLN1-206ENST00000533705 LINC00336Q6ZUF6 198 aa4.23□□□□□ -1.73
UBQLN1-206ENST00000533705 KCNQ1DNQ9H478 68 aa4.23□□□□□ -1.73
UBQLN1-206ENST00000533705 GIG44P09565 113 aaPredicted RBP4.22□□□□□ -1.73
UBQLN1-206ENST00000533705 ZNF861PO60384 105 aa4.22□□□□□ -1.73
UBQLN1-206ENST00000533705 COL6A3P12111 3177 aa4.22□□□□□ -1.73
UBQLN1-206ENST00000533705 A8MWP4 228 aa4.22□□□□□ -1.73
UBQLN1-206ENST00000533705 C15orf56Q8N910 161 aa4.22□□□□□ -1.73
UBQLN1-206ENST00000533705 LITAFQ99732 161 aa4.22□□□□□ -1.73
UBQLN1-206ENST00000533705 RANBP2P49792 3224 aaKnown RBP4.22□□□□□ -1.73
UBQLN1-206ENST00000533705 SPAG11AQ6PDA7 123 aa4.22□□□□□ -1.73
UBQLN1-206ENST00000533705 HELZ2Q9BYK8 2649 aaKnown RBP4.22□□□□□ -1.73
UBQLN1-206ENST00000533705 SSBP3-AS1Q7Z2R9 100 aa4.21□□□□□ -1.73
UBQLN1-206ENST00000533705 C9orf163Q8N9P6 203 aa4.21□□□□□ -1.73
UBQLN1-206ENST00000533705 C9orf92A6NGG3 77 aa4.21□□□□□ -1.74
UBQLN1-206ENST00000533705 LOC101927531A0A1B0GV80 90 aa4.21□□□□□ -1.74
UBQLN1-206ENST00000533705 KRTAP1-3Q8IUG1 177 aa4.21□□□□□ -1.74
UBQLN1-206ENST00000533705 LINC00612Q8N6U2 182 aa4.21□□□□□ -1.74
UBQLN1-206ENST00000533705 MRPL34Q9BQ48 92 aaKnown RBP4.21□□□□□ -1.74
UBQLN1-206ENST00000533705 PRRC2CQ9Y520 2896 aaKnown RBP4.21□□□□□ -1.74
UBQLN1-206ENST00000533705 LINC00528Q8N1L1 170 aa4.2□□□□□ -1.74
UBQLN1-206ENST00000533705 PRO0461Q9UI25 63 aa4.2□□□□□ -1.74
UBQLN1-206ENST00000533705 APLNQ9ULZ1 77 aa4.2□□□□□ -1.74
UBQLN1-206ENST00000533705 IGLV8-61A0A075B6I0 122 aa4.2□□□□□ -1.74
UBQLN1-206ENST00000533705 DMDP11532 3685 aa4.19□□□□□ -1.74
UBQLN1-206ENST00000533705 CHD7Q9P2D1 2997 aa4.19□□□□□ -1.74
UBQLN1-206ENST00000533705 DSCR10P59022 87 aa4.19□□□□□ -1.74
UBQLN1-206ENST00000533705 KRTAP1-1Q07627 177 aa4.19□□□□□ -1.74
UBQLN1-206ENST00000533705 ANAPC11Q9NYG5 84 aa4.19□□□□□ -1.74
UBQLN1-206ENST00000533705 OBSCN-AS1Q96MR7 158 aa4.19□□□□□ -1.74
UBQLN1-206ENST00000533705 C9orf129Q5T035 196 aaKnown RBP4.18□□□□□ -1.74
UBQLN1-206ENST00000533705 IGFL1Q6UW32 110 aa4.18□□□□□ -1.74
UBQLN1-206ENST00000533705 DNAH12Q6ZR08 3092 aa4.18□□□□□ -1.74
UBQLN1-206ENST00000533705 K7EQZ3 153 aa4.18□□□□□ -1.74
UBQLN1-206ENST00000533705 CDH23Q9H251 3354 aa4.18□□□□□ -1.74
UBQLN1-206ENST00000533705 UNC80Q8N2C7 3258 aa4.18□□□□□ -1.74
UBQLN1-206ENST00000533705 XIRP2A4UGR9 3374 aa4.18□□□□□ -1.74
UBQLN1-206ENST00000533705 BPTFQ12830 3046 aa4.18□□□□□ -1.74
UBQLN1-206ENST00000533705 TLX1NBP0CAT3 122 aa4.18□□□□□ -1.74
UBQLN1-206ENST00000533705 IGLV7-43P04211 117 aa4.17□□□□□ -1.74
UBQLN1-206ENST00000533705 FLNAP21333 2647 aaKnown RBP4.17□□□□□ -1.74
UBQLN1-206ENST00000533705 CASC10Q5T4H9 136 aa4.17□□□□□ -1.74
UBQLN1-206ENST00000533705 ZNF575Q86XF7 245 aa4.17□□□□□ -1.74
UBQLN1-206ENST00000533705 PSORS1C2Q9UIG4 136 aa4.17□□□□□ -1.74
UBQLN1-206ENST00000533705 PLA2G2DQ9UNK4 145 aa4.16□□□□□ -1.74
UBQLN1-206ENST00000533705 ITPR3Q14573 2671 aa4.16□□□□□ -1.74
UBQLN1-206ENST00000533705 C8orf17Q9NRJ1 99 aa4.16□□□□□ -1.74
UBQLN1-206ENST00000533705 A0A1W2PNN7 141 aa4.16□□□□□ -1.74
UBQLN1-206ENST00000533705 A0A0G2JQZ4 141 aa4.15□□□□□ -1.75
UBQLN1-206ENST00000533705 CNBPP62633 177 aaKnown RBP4.15□□□□□ -1.75
UBQLN1-206ENST00000533705 Q8N377 158 aa4.15□□□□□ -1.75
UBQLN1-206ENST00000533705 A0A1B0GVX0 72 aa4.15□□□□□ -1.75
UBQLN1-206ENST00000533705 PRR15Q8IV56 129 aa4.15□□□□□ -1.75
UBQLN1-206ENST00000533705 EIF4EBP3O60516 100 aaPredicted RBP4.15□□□□□ -1.75
UBQLN1-206ENST00000533705 IGLV5-37A0A075B6J1 123 aa4.14□□□□□ -1.75
UBQLN1-206ENST00000533705 TNP2Q05952 138 aa4.14□□□□□ -1.75
UBQLN1-206ENST00000533705 LAMA3Q16787 3333 aa4.14□□□□□ -1.75
UBQLN1-206ENST00000533705 CFAP46Q8IYW2 2715 aa4.14□□□□□ -1.75
UBQLN1-206ENST00000533705 SETXQ7Z333 2677 aaKnown RBP4.14□□□□□ -1.75
UBQLN1-206ENST00000533705 SPRR4Q96PI1 79 aa4.13□□□□□ -1.75
UBQLN1-206ENST00000533705 RBM12B-AS1Q9P1G2 102 aa4.13□□□□□ -1.75
UBQLN1-206ENST00000533705 STAB1Q9NY15 2570 aa4.13□□□□□ -1.75
UBQLN1-206ENST00000533705 LINC01600Q96MT4 127 aa4.13□□□□□ -1.75
UBQLN1-206ENST00000533705 WDFY3Q8IZQ1 3526 aa4.11□□□□□ -1.75
UBQLN1-206ENST00000533705 COA5Q86WW8 74 aa4.11□□□□□ -1.75
UBQLN1-206ENST00000533705 ERC2-IT1O76042 136 aa4.11□□□□□ -1.75
UBQLN1-206ENST00000533705 CENPEQ02224 2701 aa4.09□□□□□ -1.75
UBQLN1-206ENST00000533705 RPS28P62857 69 aaKnown RBP4.09□□□□□ -1.75
UBQLN1-206ENST00000533705 PRO0628Q9UI54 55 aa4.09□□□□□ -1.75
UBQLN1-206ENST00000533705 ZFHX4Q86UP3 3567 aa4.08□□□□□ -1.76
UBQLN1-206ENST00000533705 LINC01554Q52M75 96 aa4.08□□□□□ -1.76
UBQLN1-206ENST00000533705 TEP1Q99973 2627 aaKnown RBP4.08□□□□□ -1.76
UBQLN1-206ENST00000533705 UQCR11O14957 56 aa4.08□□□□□ -1.76
UBQLN1-206ENST00000533705 Q6ZSA8 131 aa4.07□□□□□ -1.76
UBQLN1-206ENST00000533705 DCHS1Q96JQ0 3298 aa4.07□□□□□ -1.76
UBQLN1-206ENST00000533705 IGLV7-46A0A075B6I9 117 aa4.07□□□□□ -1.76
UBQLN1-206ENST00000533705 A0A1W2PNM2 257 aa4.06□□□□□ -1.76
UBQLN1-206ENST00000533705 C4orf26Q17RF5 130 aa4.06□□□□□ -1.76
UBQLN1-206ENST00000533705 PRR26Q8N8Z3 221 aa4.06□□□□□ -1.76
UBQLN1-206ENST00000533705 M0R2T5 61 aa4.06□□□□□ -1.76
UBQLN1-206ENST00000533705 USP34Q70CQ2 3546 aa4.06□□□□□ -1.76
UBQLN1-206ENST00000533705 WIPF1O43516 503 aa4.05□□□□□ -1.76
UBQLN1-206ENST00000533705 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.05□□□□□ -1.76
UBQLN1-206ENST00000533705 A8MUN3 132 aa4.05□□□□□ -1.76
UBQLN1-206ENST00000533705 Q8N1X5 172 aa4.04□□□□□ -1.76
UBQLN1-206ENST00000533705 CYP4F30PQ9H0H9 118 aa4.04□□□□□ -1.76
UBQLN1-206ENST00000533705 SPINT4Q6UDR6 99 aa4.04□□□□□ -1.76
UBQLN1-206ENST00000533705 VCANP13611 3396 aa4.04□□□□□ -1.76
UBQLN1-206ENST00000533705 IGLV5-48A0A075B6I7 105 aa4.04□□□□□ -1.76
UBQLN1-206ENST00000533705 MYO15AQ9UKN7 3530 aa4.03□□□□□ -1.76
UBQLN1-206ENST00000533705 CRIPTQ9P021 101 aa4.03□□□□□ -1.76
UBQLN1-206ENST00000533705 CD164Q04900 197 aa4.03□□□□□ -1.76
UBQLN1-206ENST00000533705 MIR22HGQ0VDD5 57 aa4.03□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 525.5 ms