RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 JOSD1Q15040 202 aaPredicted RBP4.05□□□□□ -1.76
NXF1-215ENST00000533440 LCE4AQ5TA78 99 aa4.05□□□□□ -1.76
NXF1-215ENST00000533440 Q5XG85 94 aa4.05□□□□□ -1.76
NXF1-215ENST00000533440 LOC107984156A0A0G2JMH3 177 aa4.04□□□□□ -1.76
NXF1-215ENST00000533440 TMEM223A0PJW6 202 aa4.04□□□□□ -1.76
NXF1-215ENST00000533440 CD164Q04900 197 aa4.04□□□□□ -1.76
NXF1-215ENST00000533440 MEIG1Q5JSS6 88 aa4.04□□□□□ -1.76
NXF1-215ENST00000533440 C1orf195Q5TG92 126 aa4.04□□□□□ -1.76
NXF1-215ENST00000533440 Q6Q795 121 aa4.04□□□□□ -1.76
NXF1-215ENST00000533440 ARL17AQ8IVW1 177 aa4.04□□□□□ -1.76
NXF1-215ENST00000533440 SMCO4Q9NRQ5 59 aa4.04□□□□□ -1.76
NXF1-215ENST00000533440 LINC00587B1AMM8 73 aa4.03□□□□□ -1.76
NXF1-215ENST00000533440 HERV-K104P63124 156 aa4.03□□□□□ -1.76
NXF1-215ENST00000533440 BAGE3Q86Y29 109 aa4.03□□□□□ -1.76
NXF1-215ENST00000533440 KRTAP4-8A0A0G2JLE6 195 aa4.02□□□□□ -1.77
NXF1-215ENST00000533440 MT2AP02795 61 aa4.02□□□□□ -1.77
NXF1-215ENST00000533440 SLC25A34Q6PIV7 304 aa4.02□□□□□ -1.77
NXF1-215ENST00000533440 TRAV23DV6A0A075B6W5 121 aa4.01□□□□□ -1.77
NXF1-215ENST00000533440 HBDP02042 147 aa4.01□□□□□ -1.77
NXF1-215ENST00000533440 URB1-AS1Q96HZ7 61 aa4.01□□□□□ -1.77
NXF1-215ENST00000533440 MAP1LC3CQ9BXW4 147 aa4.01□□□□□ -1.77
NXF1-215ENST00000533440 SPANXB1Q9NS25 103 aaPredicted RBP4.01□□□□□ -1.77
NXF1-215ENST00000533440 CHTOPQ9Y3Y2 248 aaKnown RBP4.01□□□□□ -1.77
NXF1-215ENST00000533440 H7C2G1 150 aa4□□□□□ -1.77
NXF1-215ENST00000533440 ZNF73O43830 326 aaPredicted RBP4□□□□□ -1.77
NXF1-215ENST00000533440 LCE1DQ5T752 114 aa4□□□□□ -1.77
NXF1-215ENST00000533440 KRTAP9-3Q9BYQ3 159 aa4□□□□□ -1.77
NXF1-215ENST00000533440 LAMTOR3Q9UHA4 124 aa4□□□□□ -1.77
NXF1-215ENST00000533440 NDUFC2O95298 119 aa3.99□□□□□ -1.77
NXF1-215ENST00000533440 MT1FP04733 61 aa3.99□□□□□ -1.77
NXF1-215ENST00000533440 KRTAP6-3Q3LI67 103 aa3.99□□□□□ -1.77
NXF1-215ENST00000533440 S100A7L2Q5SY68 101 aa3.99□□□□□ -1.77
NXF1-215ENST00000533440 SMIM29Q86T20 159 aa3.99□□□□□ -1.77
NXF1-215ENST00000533440 PRO1933Q9H354 126 aa3.99□□□□□ -1.77
NXF1-215ENST00000533440 MYMXA0A1B0GTQ4 84 aa3.98□□□□□ -1.77
NXF1-215ENST00000533440 C20orf202A1L168 122 aa3.98□□□□□ -1.77
NXF1-215ENST00000533440 LINC00614P0C842 121 aa3.98□□□□□ -1.77
NXF1-215ENST00000533440 PMCHL1Q16048 86 aa3.98□□□□□ -1.77
NXF1-215ENST00000533440 CLLU1Q5K131 121 aa3.98□□□□□ -1.77
NXF1-215ENST00000533440 TRAV12-1A0A0B4J245 112 aa3.97□□□□□ -1.77
NXF1-215ENST00000533440 S100PP25815 95 aa3.97□□□□□ -1.77
NXF1-215ENST00000533440 HINT1P49773 126 aaPredicted RBP3.97□□□□□ -1.77
NXF1-215ENST00000533440 FABP9Q0Z7S8 132 aa3.97□□□□□ -1.77
NXF1-215ENST00000533440 KRTAP19-6Q3LI70 58 aa3.97□□□□□ -1.77
NXF1-215ENST00000533440 COX19Q49B96 90 aa3.97□□□□□ -1.77
NXF1-215ENST00000533440 UQCC3Q6UW78 93 aa3.97□□□□□ -1.77
NXF1-215ENST00000533440 LINC00846Q9NV44 126 aa3.97□□□□□ -1.77
NXF1-215ENST00000533440 NEBP20929 6669 aa3.97□□□□□ -1.77
NXF1-215ENST00000533440 TMEM218A2RU14 115 aa3.96□□□□□ -1.78
NXF1-215ENST00000533440 AKR1D1P51857 326 aa3.96□□□□□ -1.78
NXF1-215ENST00000533440 Q1RN00 199 aa3.96□□□□□ -1.78
NXF1-215ENST00000533440 ATP11AUNQ6ZP68 121 aa3.96□□□□□ -1.78
NXF1-215ENST00000533440 Q75L30 129 aa3.96□□□□□ -1.78
NXF1-215ENST00000533440 C18orf32Q8TCD1 76 aa3.96□□□□□ -1.78
NXF1-215ENST00000533440 MIEN1Q9BRT3 115 aa3.96□□□□□ -1.78
NXF1-215ENST00000533440 DHRS4-AS1Q9P1J3 65 aa3.96□□□□□ -1.78
NXF1-215ENST00000533440 TSPEAR-AS2P59090 65 aa3.95□□□□□ -1.78
NXF1-215ENST00000533440 SEC11CQ9BY50 192 aa3.95□□□□□ -1.78
NXF1-215ENST00000533440 RPS10P5Q9NQ39 176 aa3.95□□□□□ -1.78
NXF1-215ENST00000533440 CBY1Q9Y3M2 126 aa3.95□□□□□ -1.78
NXF1-215ENST00000533440 IFITM2Q01629 132 aa3.94□□□□□ -1.78
NXF1-215ENST00000533440 C10orf91Q5T1B1 145 aa3.94□□□□□ -1.78
NXF1-215ENST00000533440 SOSTDC1Q6X4U4 206 aa3.94□□□□□ -1.78
NXF1-215ENST00000533440 COMMD7Q86VX2 200 aa3.94□□□□□ -1.78
NXF1-215ENST00000533440 MUC12Q9UKN1 5478 aa3.93□□□□□ -1.78
NXF1-215ENST00000533440 A0A0G2JQZ4 141 aa3.93□□□□□ -1.78
NXF1-215ENST00000533440 TEX49A0A1B0GTD5 131 aa3.93□□□□□ -1.78
NXF1-215ENST00000533440 KRTAP10-10P60014 251 aa3.93□□□□□ -1.78
NXF1-215ENST00000533440 TAL2Q16559 108 aa3.93□□□□□ -1.78
NXF1-215ENST00000533440 IFI27L1Q96BM0 104 aa3.93□□□□□ -1.78
NXF1-215ENST00000533440 LEPROTO15243 131 aa3.92□□□□□ -1.78
NXF1-215ENST00000533440 TRIAP1O43715 76 aa3.92□□□□□ -1.78
NXF1-215ENST00000533440 TCL1BO95988 128 aa3.92□□□□□ -1.78
NXF1-215ENST00000533440 ELOF1P60002 83 aaKnown RBP3.92□□□□□ -1.78
NXF1-215ENST00000533440 DEFB105AQ8NG35 78 aa3.92□□□□□ -1.78
NXF1-215ENST00000533440 NMUP48645 174 aa3.91□□□□□ -1.78
NXF1-215ENST00000533440 RHEBQ15382 184 aa3.91□□□□□ -1.78
NXF1-215ENST00000533440 OBSCN-AS1Q96MR7 158 aa3.91□□□□□ -1.78
NXF1-215ENST00000533440 TRBV20-1A0A075B6N2 111 aa3.9□□□□□ -1.79
NXF1-215ENST00000533440 J3QQQ9 107 aa3.9□□□□□ -1.79
NXF1-215ENST00000533440 COX7BP24311 80 aa3.9□□□□□ -1.79
NXF1-215ENST00000533440 NPC2P61916 151 aa3.9□□□□□ -1.79
NXF1-215ENST00000533440 ADAMTSL4-AS1Q5T5F5 129 aa3.9□□□□□ -1.79
NXF1-215ENST00000533440 PCP2Q8IVA1 136 aa3.9□□□□□ -1.79
NXF1-215ENST00000533440 TRAPPC1Q9Y5R8 145 aa3.9□□□□□ -1.79
NXF1-215ENST00000533440 IGLV5-48A0A075B6I7 105 aa3.89□□□□□ -1.79
NXF1-215ENST00000533440 C6orf99Q4VX62 202 aa3.88□□□□□ -1.79
NXF1-215ENST00000533440 OR13C6PQ8NH95 151 aa3.88□□□□□ -1.79
NXF1-215ENST00000533440 SPANXCQ9NY87 97 aa3.88□□□□□ -1.79
NXF1-215ENST00000533440 A0A0J9YXY3 114 aa3.87□□□□□ -1.79
NXF1-215ENST00000533440 LGALS3P17931 250 aaKnown RBP3.87□□□□□ -1.79
NXF1-215ENST00000533440 CHCHD1Q96BP2 118 aaKnown RBP3.87□□□□□ -1.79
NXF1-215ENST00000533440 C20orf166-AS1Q96NR2 134 aa3.87□□□□□ -1.79
NXF1-215ENST00000533440 SPANXDQ9BXN6 97 aa3.87□□□□□ -1.79
NXF1-215ENST00000533440 KRTAP4-7Q9BYR0 210 aa3.87□□□□□ -1.79
NXF1-215ENST00000533440 TRBV7-6A0A0J9YX20 115 aa3.86□□□□□ -1.79
NXF1-215ENST00000533440 A8MUU9 505 aa3.86□□□□□ -1.79
NXF1-215ENST00000533440 LCE5AQ5TCM9 118 aa3.86□□□□□ -1.79
NXF1-215ENST00000533440 LINC00308Q8TCZ7 52 aa3.86□□□□□ -1.79
NXF1-215ENST00000533440 SNAPINO95295 136 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms