RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 PSCAO43653 123 aa5.37□□□□□ -1.55
NEDD8-207ENST00000533242 UNQ6190/PRO20217Q6UXQ8 127 aa5.37□□□□□ -1.55
NEDD8-207ENST00000533242 Q8N814 137 aa5.37□□□□□ -1.55
NEDD8-207ENST00000533242 KLK12Q9UKR0 248 aa5.37□□□□□ -1.55
NEDD8-207ENST00000533242 MALP21145 153 aa5.37□□□□□ -1.55
NEDD8-207ENST00000533242 ENHOQ6UWT2 76 aa5.37□□□□□ -1.55
NEDD8-207ENST00000533242 GAGE2BQ13066 116 aa5.36□□□□□ -1.55
NEDD8-207ENST00000533242 GAGE2EQ4V326 116 aa5.36□□□□□ -1.55
NEDD8-207ENST00000533242 LELP1Q5T871 98 aa5.36□□□□□ -1.55
NEDD8-207ENST00000533242 LINC01561Q8N1V8 128 aa5.36□□□□□ -1.55
NEDD8-207ENST00000533242 GAGE2DQ9UEU5 116 aa5.36□□□□□ -1.55
NEDD8-207ENST00000533242 OXTP01178 125 aa5.36□□□□□ -1.55
NEDD8-207ENST00000533242 Q6ZSA8 131 aa5.36□□□□□ -1.55
NEDD8-207ENST00000533242 PRR34Q9NV39 138 aa5.36□□□□□ -1.55
NEDD8-207ENST00000533242 PLA2G2DQ9UNK4 145 aa5.36□□□□□ -1.55
NEDD8-207ENST00000533242 NCR3O14931 201 aa5.35□□□□□ -1.55
NEDD8-207ENST00000533242 CFAP161Q6P656 301 aa5.35□□□□□ -1.55
NEDD8-207ENST00000533242 NDUFV3P56181 108 aaKnown RBP5.35□□□□□ -1.55
NEDD8-207ENST00000533242 ANAPC13Q9BS18 74 aa5.35□□□□□ -1.55
NEDD8-207ENST00000533242 C14orf132Q9NPU4 83 aa5.35□□□□□ -1.55
NEDD8-207ENST00000533242 SPAG11BQ08648 103 aa5.34□□□□□ -1.55
NEDD8-207ENST00000533242 LINC01556Q5JQF7 62 aa5.34□□□□□ -1.55
NEDD8-207ENST00000533242 H0YGX0 51 aa5.34□□□□□ -1.56
NEDD8-207ENST00000533242 DNAL4O96015 105 aa5.34□□□□□ -1.56
NEDD8-207ENST00000533242 SDIM1Q6ZPB5 146 aa5.34□□□□□ -1.56
NEDD8-207ENST00000533242 GAGE2AQ6NT46 116 aa5.33□□□□□ -1.56
NEDD8-207ENST00000533242 Q6Q795 121 aa5.33□□□□□ -1.56
NEDD8-207ENST00000533242 CXCL5P42830 114 aa5.32□□□□□ -1.56
NEDD8-207ENST00000533242 COX17Q14061 63 aa5.32□□□□□ -1.56
NEDD8-207ENST00000533242 OBSCN-AS1Q96MR7 158 aa5.32□□□□□ -1.56
NEDD8-207ENST00000533242 DNAH8Q96JB1 4490 aa5.32□□□□□ -1.56
NEDD8-207ENST00000533242 NDUFC2O95298 119 aa5.32□□□□□ -1.56
NEDD8-207ENST00000533242 GHRHP01286 108 aa5.32□□□□□ -1.56
NEDD8-207ENST00000533242 C6orf99Q4VX62 202 aa5.32□□□□□ -1.56
NEDD8-207ENST00000533242 TRBV7-7A0A0K0K1E9 115 aa5.31□□□□□ -1.56
NEDD8-207ENST00000533242 KRTAP10-4P60372 401 aaPredicted RBP5.31□□□□□ -1.56
NEDD8-207ENST00000533242 KRTAP26-1Q6PEX3 210 aa5.31□□□□□ -1.56
NEDD8-207ENST00000533242 C6orf48Q9UBA6 75 aa5.31□□□□□ -1.56
NEDD8-207ENST00000533242 CCDC179H3BU77 68 aa5.31□□□□□ -1.56
NEDD8-207ENST00000533242 HIGD2BQ4VC39 106 aa5.31□□□□□ -1.56
NEDD8-207ENST00000533242 XAGE1AQ9HD64 81 aa5.31□□□□□ -1.56
NEDD8-207ENST00000533242 ACYP1P07311 99 aa5.3□□□□□ -1.56
NEDD8-207ENST00000533242 LINC00167Q96N53 147 aa5.3□□□□□ -1.56
NEDD8-207ENST00000533242 TMEM126AQ9H061 195 aa5.3□□□□□ -1.56
NEDD8-207ENST00000533242 RPL18AQ02543 176 aaKnown RBP5.3□□□□□ -1.56
NEDD8-207ENST00000533242 SCXQ7RTU7 201 aa5.3□□□□□ -1.56
NEDD8-207ENST00000533242 LINC00846Q9NV44 126 aa5.3□□□□□ -1.56
NEDD8-207ENST00000533242 LCE2CQ5TA81 110 aa5.29□□□□□ -1.56
NEDD8-207ENST00000533242 HMCN2Q8NDA2 5059 aa5.29□□□□□ -1.56
NEDD8-207ENST00000533242 LINC00643Q86TS7 51 aa5.29□□□□□ -1.56
NEDD8-207ENST00000533242 ORMDL1Q9P0S3 153 aa5.29□□□□□ -1.56
NEDD8-207ENST00000533242 FAM236AA0A1B0GUQ0 79 aa5.28□□□□□ -1.56
NEDD8-207ENST00000533242 FAM236BA0A1B0GV22 79 aa5.28□□□□□ -1.56
NEDD8-207ENST00000533242 C15orf56Q8N910 161 aa5.28□□□□□ -1.56
NEDD8-207ENST00000533242 IGLV6-57P01721 117 aa5.28□□□□□ -1.56
NEDD8-207ENST00000533242 S100A7L2Q5SY68 101 aa5.28□□□□□ -1.56
NEDD8-207ENST00000533242 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.27□□□□□ -1.57
NEDD8-207ENST00000533242 TRBV10-3A0A0K0K1G6 114 aa5.27□□□□□ -1.57
NEDD8-207ENST00000533242 B5MCH6 92 aa5.27□□□□□ -1.57
NEDD8-207ENST00000533242 LINC00575Q6W349 94 aa5.27□□□□□ -1.57
NEDD8-207ENST00000533242 GVQW2A0A096LPI5 108 aaPredicted RBP5.26□□□□□ -1.57
NEDD8-207ENST00000533242 Q6ZRU5 148 aa5.26□□□□□ -1.57
NEDD8-207ENST00000533242 CIRBP-AS1Q8TBR5 109 aa5.26□□□□□ -1.57
NEDD8-207ENST00000533242 IGKV3D-7A0A0C4DH55 119 aa5.25□□□□□ -1.57
NEDD8-207ENST00000533242 UBR4Q5T4S7 5183 aa5.25□□□□□ -1.57
NEDD8-207ENST00000533242 RMI2Q96E14 147 aa5.25□□□□□ -1.57
NEDD8-207ENST00000533242 CAMK2N2Q96S95 79 aa5.25□□□□□ -1.57
NEDD8-207ENST00000533242 SS18L2Q9UHA2 77 aa5.25□□□□□ -1.57
NEDD8-207ENST00000533242 FAT3Q8TDW7 4589 aa5.25□□□□□ -1.57
NEDD8-207ENST00000533242 PKHD1L1Q86WI1 4243 aa5.24□□□□□ -1.57
NEDD8-207ENST00000533242 A0A1B0GX51 115 aa5.24□□□□□ -1.57
NEDD8-207ENST00000533242 RPL37AP61513 92 aaKnown RBP5.24□□□□□ -1.57
NEDD8-207ENST00000533242 IMUPQ9GZP8 106 aa5.24□□□□□ -1.57
NEDD8-207ENST00000533242 A0A087WVE0 104 aa5.24□□□□□ -1.57
NEDD8-207ENST00000533242 ZNF561-AS1K7EIQ3 104 aa5.24□□□□□ -1.57
NEDD8-207ENST00000533242 CCKP06307 115 aa5.24□□□□□ -1.57
NEDD8-207ENST00000533242 VPREB1P12018 145 aa5.24□□□□□ -1.57
NEDD8-207ENST00000533242 LRP1Q07954 4544 aaKnown RBP5.23□□□□□ -1.57
NEDD8-207ENST00000533242 hADV29S1A0JD25 119 aa5.23□□□□□ -1.57
NEDD8-207ENST00000533242 TMEM256-PLSCR3K7ERE1 68 aa5.23□□□□□ -1.57
NEDD8-207ENST00000533242 Q6ZQY7 126 aa5.23□□□□□ -1.57
NEDD8-207ENST00000533242 Q6ZRP5 223 aa5.23□□□□□ -1.57
NEDD8-207ENST00000533242 TRAV23DV6A0A075B6W5 121 aa5.23□□□□□ -1.57
NEDD8-207ENST00000533242 IGKV2D-24A0A075B6R9 120 aa5.22□□□□□ -1.57
NEDD8-207ENST00000533242 MT1HL1P0DM35 61 aa5.22□□□□□ -1.57
NEDD8-207ENST00000533242 JMJD7-PLA2G4BH0Y9G9 81 aa5.21□□□□□ -1.58
NEDD8-207ENST00000533242 ZNF73O43830 326 aaPredicted RBP5.21□□□□□ -1.58
NEDD8-207ENST00000533242 HIST1H4AP62805 103 aaKnown RBP5.21□□□□□ -1.58
NEDD8-207ENST00000533242 C1orf43Q9BWL3 253 aa5.21□□□□□ -1.58
NEDD8-207ENST00000533242 NDUFC2-KCTD14E9PQ53 114 aa5.2□□□□□ -1.58
NEDD8-207ENST00000533242 C14orf177Q52M58 125 aa5.2□□□□□ -1.58
NEDD8-207ENST00000533242 Q6JHZ5 121 aa5.2□□□□□ -1.58
NEDD8-207ENST00000533242 Q6ZQT0 140 aa5.2□□□□□ -1.58
NEDD8-207ENST00000533242 DIRC1Q969H9 104 aa5.2□□□□□ -1.58
NEDD8-207ENST00000533242 ELOF1P60002 83 aaKnown RBP5.19□□□□□ -1.58
NEDD8-207ENST00000533242 C2orf48Q96LS8 159 aa5.19□□□□□ -1.58
NEDD8-207ENST00000533242 LAMTOR3Q9UHA4 124 aa5.19□□□□□ -1.58
NEDD8-207ENST00000533242 COX7BP24311 80 aa5.18□□□□□ -1.58
NEDD8-207ENST00000533242 RBM3P98179 157 aaKnown RBP5.18□□□□□ -1.58
NEDD8-207ENST00000533242 SYCNQ0VAF6 134 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms