RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 COPS9Q8WXC6 57 aa14.94□□□□□ -0.02
USP48-214ENST00000532737 KRTAP4-16G5E9R7 235 aaPredicted RBP14.92□□□□□ -0.02
USP48-214ENST00000532737 LINC00337Q8N6G1 96 aa14.92□□□□□ -0.02
USP48-214ENST00000532737 KRTAP1-4P0C5Y4 121 aa14.91□□□□□ -0.02
USP48-214ENST00000532737 S100A12P80511 92 aa14.91□□□□□ -0.02
USP48-214ENST00000532737 LINC00518Q8N0U6 118 aa14.91□□□□□ -0.02
USP48-214ENST00000532737 OR13C6PQ8NH95 151 aa14.9□□□□□ -0.02
USP48-214ENST00000532737 TRAV23DV6A0A075B6W5 121 aa14.88□□□□□ -0.03
USP48-214ENST00000532737 ETDCA0A1B0GVM5 59 aa14.88□□□□□ -0.03
USP48-214ENST00000532737 KRTAP10-8P60410 259 aa14.87□□□□□ -0.03
USP48-214ENST00000532737 SLC25A34Q6PIV7 304 aa14.86□□□□□ -0.03
USP48-214ENST00000532737 HIGD2AQ9BW72 106 aa14.86□□□□□ -0.03
USP48-214ENST00000532737 B5MCH6 92 aa14.85□□□□□ -0.03
USP48-214ENST00000532737 ZNF73O43830 326 aaPredicted RBP14.83□□□□□ -0.04
USP48-214ENST00000532737 PRR26Q8N8Z3 221 aa14.83□□□□□ -0.04
USP48-214ENST00000532737 UBR4Q5T4S7 5183 aa14.82□□□□□ -0.04
USP48-214ENST00000532737 C2orf91Q6ZV80 131 aa14.82□□□□□ -0.04
USP48-214ENST00000532737 HIST1H4GQ99525 98 aa14.82□□□□□ -0.04
USP48-214ENST00000532737 CBY1Q9Y3M2 126 aa14.82□□□□□ -0.04
USP48-214ENST00000532737 TNXBP22105 4242 aa14.81□□□□□ -0.04
USP48-214ENST00000532737 HIGD1BQ9P298 99 aa14.81□□□□□ -0.04
USP48-214ENST00000532737 A4D1N5 150 aa14.8□□□□□ -0.04
USP48-214ENST00000532737 A6NDN8 102 aa14.79□□□□□ -0.04
USP48-214ENST00000532737 SMCR5Q8TEV8 140 aa14.79□□□□□ -0.04
USP48-214ENST00000532737 Q6ZRX8 168 aa14.78□□□□□ -0.04
USP48-214ENST00000532737 ANAPC11Q9NYG5 84 aa14.78□□□□□ -0.04
USP48-214ENST00000532737 Q9BRP9 147 aa14.76□□□□□ -0.05
USP48-214ENST00000532737 TRAV13-2A0A0B4J235 113 aa14.75□□□□□ -0.05
USP48-214ENST00000532737 A0A087X002 238 aa14.73□□□□□ -0.05
USP48-214ENST00000532737 ERC2-IT1O76042 136 aa14.73□□□□□ -0.05
USP48-214ENST00000532737 C6orf99Q4VX62 202 aa14.73□□□□□ -0.05
USP48-214ENST00000532737 HINT1P49773 126 aaPredicted RBP14.72□□□□□ -0.05
USP48-214ENST00000532737 SPRR4Q96PI1 79 aa14.71□□□□□ -0.05
USP48-214ENST00000532737 C12orf57Q99622 126 aa14.7□□□□□ -0.06
USP48-214ENST00000532737 CRYGAP11844 174 aa14.69□□□□□ -0.06
USP48-214ENST00000532737 RPL13AP40429 203 aaKnown RBP14.68□□□□□ -0.06
USP48-214ENST00000532737 FAM229BQ4G0N7 80 aa14.68□□□□□ -0.06
USP48-214ENST00000532737 SMIM11BQ8TCY0 68 aa14.68□□□□□ -0.06
USP48-214ENST00000532737 ZNF706Q9Y5V0 76 aaPredicted RBP14.68□□□□□ -0.06
USP48-214ENST00000532737 COX7BP24311 80 aa14.67□□□□□ -0.06
USP48-214ENST00000532737 TAL2Q16559 108 aa14.67□□□□□ -0.06
USP48-214ENST00000532737 ELOF1P60002 83 aaKnown RBP14.66□□□□□ -0.06
USP48-214ENST00000532737 KRTAP13-2Q52LG2 175 aa14.65□□□□□ -0.06
USP48-214ENST00000532737 UQCR10Q9UDW1 63 aa14.65□□□□□ -0.06
USP48-214ENST00000532737 TRBV7-6A0A0J9YX20 115 aa14.64□□□□□ -0.07
USP48-214ENST00000532737 CEND1Q8N111 149 aa14.64□□□□□ -0.07
USP48-214ENST00000532737 LOC105371267A0A1B0GV96 52 aa14.62□□□□□ -0.07
USP48-214ENST00000532737 CFC1BP0CG36 223 aa14.62□□□□□ -0.07
USP48-214ENST00000532737 CFC1P0CG37 223 aa14.62□□□□□ -0.07
USP48-214ENST00000532737 SMIM6P0DI80 62 aa14.61□□□□□ -0.07
USP48-214ENST00000532737 GAGE2AQ6NT46 116 aa14.61□□□□□ -0.07
USP48-214ENST00000532737 DHRS4-AS1Q9P1J3 65 aa14.61□□□□□ -0.07
USP48-214ENST00000532737 ST20-AS1Q8NBB2 130 aa14.6□□□□□ -0.07
USP48-214ENST00000532737 TYMSOSQ8TAI1 123 aa14.6□□□□□ -0.07
USP48-214ENST00000532737 A0A1B0GWB2 263 aa14.59□□□□□ -0.07
USP48-214ENST00000532737 LINC00483Q53H64 154 aa14.59□□□□□ -0.07
USP48-214ENST00000532737 FXYD2P54710 66 aa14.58□□□□□ -0.08
USP48-214ENST00000532737 HSD52Q0P140 79 aa14.58□□□□□ -0.08
USP48-214ENST00000532737 C3orf22Q8N5N4 141 aa14.57□□□□□ -0.08
USP48-214ENST00000532737 PRO1933Q9H354 126 aa14.57□□□□□ -0.08
USP48-214ENST00000532737 A0A0B4J2C4 111 aa14.56□□□□□ -0.08
USP48-214ENST00000532737 RAB37Q96AX2 223 aa14.56□□□□□ -0.08
USP48-214ENST00000532737 TMEM238LA0A1B0GVL6 79 aa14.53□□□□□ -0.08
USP48-214ENST00000532737 A6NJY4 79 aa14.53□□□□□ -0.08
USP48-214ENST00000532737 H7C2G1 150 aa14.53□□□□□ -0.08
USP48-214ENST00000532737 VAMP3Q15836 100 aa14.51□□□□□ -0.09
USP48-214ENST00000532737 PRO1854Q9UHT4 67 aa14.48□□□□□ -0.09
USP48-214ENST00000532737 SPRR1BP22528 89 aa14.47□□□□□ -0.09
USP48-214ENST00000532737 LINC00575Q6W349 94 aa14.46□□□□□ -0.09
USP48-214ENST00000532737 NHP2Q9NX24 153 aaKnown RBP14.45□□□□□ -0.1
USP48-214ENST00000532737 LRP2P98164 4655 aa14.45□□□□□ -0.1
USP48-214ENST00000532737 IGLV9-49A0A0B4J1Y8 123 aa14.44□□□□□ -0.1
USP48-214ENST00000532737 LINC00304Q8N9R0 145 aa14.44□□□□□ -0.1
USP48-214ENST00000532737 DEFB105AQ8NG35 78 aa14.44□□□□□ -0.1
USP48-214ENST00000532737 BVES-AS1Q5T3Y7 98 aa14.43□□□□□ -0.1
USP48-214ENST00000532737 K7ERJ3 54 aa14.42□□□□□ -0.1
USP48-214ENST00000532737 SLC25A20O43772 301 aa14.42□□□□□ -0.1
USP48-214ENST00000532737 TSPAN13O95857 204 aa14.42□□□□□ -0.1
USP48-214ENST00000532737 MOBPQ13875 183 aa14.41□□□□□ -0.1
USP48-214ENST00000532737 Q1RN00 199 aa14.41□□□□□ -0.1
USP48-214ENST00000532737 LINC01547P58512 204 aaPredicted RBP14.4□□□□□ -0.1
USP48-214ENST00000532737 IGLV5-48A0A075B6I7 105 aa14.39□□□□□ -0.11
USP48-214ENST00000532737 TEX49A0A1B0GTD5 131 aa14.39□□□□□ -0.11
USP48-214ENST00000532737 hADV29S1A0JD25 119 aa14.39□□□□□ -0.11
USP48-214ENST00000532737 Q8NBF4 154 aa14.39□□□□□ -0.11
USP48-214ENST00000532737 CTAG1AP78358 180 aa14.38□□□□□ -0.11
USP48-214ENST00000532737 RNF213Q63HN8 5207 aa14.36□□□□□ -0.11
USP48-214ENST00000532737 SSBP3-AS1Q7Z2R9 100 aa14.36□□□□□ -0.11
USP48-214ENST00000532737 Q8N377 158 aa14.35□□□□□ -0.11
USP48-214ENST00000532737 LAMTOR3Q9UHA4 124 aa14.35□□□□□ -0.11
USP48-214ENST00000532737 H0YGX0 51 aa14.34□□□□□ -0.11
USP48-214ENST00000532737 C9orf153Q5TBE3 101 aa14.34□□□□□ -0.11
USP48-214ENST00000532737 SMIM29Q86T20 159 aa14.34□□□□□ -0.11
USP48-214ENST00000532737 TSTD3H0UI37 97 aa14.33□□□□□ -0.12
USP48-214ENST00000532737 Q6ZQY7 126 aa14.33□□□□□ -0.12
USP48-214ENST00000532737 TRIAP1O43715 76 aa14.32□□□□□ -0.12
USP48-214ENST00000532737 SPAG11AQ6PDA7 123 aa14.31□□□□□ -0.12
USP48-214ENST00000532737 FAM218AQ96MZ4 157 aa14.31□□□□□ -0.12
USP48-214ENST00000532737 C4orf48Q5BLP8 95 aa14.3□□□□□ -0.12
USP48-214ENST00000532737 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms