RNA–Protein interactions for RNA: ENST00000531613.1

PCDHA8-202, Transcript of protocadherin alpha 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA8, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8-202ENST00000531613 PRO0628Q9UI54 55 aa11.54□□□□□ -0.56
PCDHA8-202ENST00000531613 C15orf56Q8N910 161 aa11.53□□□□□ -0.56
PCDHA8-202ENST00000531613 KRTAP10-3P60369 221 aa11.52□□□□□ -0.56
PCDHA8-202ENST00000531613 LINC00612Q8N6U2 182 aa11.52□□□□□ -0.56
PCDHA8-202ENST00000531613 MRPL34Q9BQ48 92 aaKnown RBP11.52□□□□□ -0.56
PCDHA8-202ENST00000531613 RPS28P62857 69 aaKnown RBP11.52□□□□□ -0.57
PCDHA8-202ENST00000531613 K7EQZ3 153 aa11.5□□□□□ -0.57
PCDHA8-202ENST00000531613 A0A087WTM6 91 aa11.49□□□□□ -0.57
PCDHA8-202ENST00000531613 ZNF861PO60384 105 aa11.49□□□□□ -0.57
PCDHA8-202ENST00000531613 SSBP3-AS1Q7Z2R9 100 aa11.48□□□□□ -0.57
PCDHA8-202ENST00000531613 C9orf163Q8N9P6 203 aa11.48□□□□□ -0.57
PCDHA8-202ENST00000531613 IGFL1Q6UW32 110 aa11.47□□□□□ -0.57
PCDHA8-202ENST00000531613 EIF4EBP3O60516 100 aaPredicted RBP11.45□□□□□ -0.58
PCDHA8-202ENST00000531613 C9orf129Q5T035 196 aaKnown RBP11.44□□□□□ -0.58
PCDHA8-202ENST00000531613 LINC00304Q8N9R0 145 aa11.44□□□□□ -0.58
PCDHA8-202ENST00000531613 TLX1NBP0CAT3 122 aa11.44□□□□□ -0.58
PCDHA8-202ENST00000531613 IGLV8-61A0A075B6I0 122 aa11.41□□□□□ -0.58
PCDHA8-202ENST00000531613 PLA2G2DQ9UNK4 145 aa11.41□□□□□ -0.58
PCDHA8-202ENST00000531613 Q8N377 158 aa11.4□□□□□ -0.58
PCDHA8-202ENST00000531613 KRTAP1-3Q8IUG1 177 aa11.4□□□□□ -0.59
PCDHA8-202ENST00000531613 FLNAP21333 2647 aaKnown RBP11.39□□□□□ -0.59
PCDHA8-202ENST00000531613 PRR15Q8IV56 129 aa11.39□□□□□ -0.59
PCDHA8-202ENST00000531613 C8orf17Q9NRJ1 99 aa11.39□□□□□ -0.59
PCDHA8-202ENST00000531613 ERC2-IT1O76042 136 aa11.39□□□□□ -0.59
PCDHA8-202ENST00000531613 DSCR10P59022 87 aa11.38□□□□□ -0.59
PCDHA8-202ENST00000531613 HELZ2Q9BYK8 2649 aaKnown RBP11.38□□□□□ -0.59
PCDHA8-202ENST00000531613 COX6B2Q6YFQ2 88 aa11.37□□□□□ -0.59
PCDHA8-202ENST00000531613 C4orf26Q17RF5 130 aa11.37□□□□□ -0.59
PCDHA8-202ENST00000531613 A0A1B0GVX0 72 aa11.36□□□□□ -0.59
PCDHA8-202ENST00000531613 SMR3BP02814 79 aaPredicted RBP11.36□□□□□ -0.59
PCDHA8-202ENST00000531613 APLNQ9ULZ1 77 aa11.35□□□□□ -0.59
PCDHA8-202ENST00000531613 KRTAP1-1Q07627 177 aa11.34□□□□□ -0.59
PCDHA8-202ENST00000531613 LINC00336Q6ZUF6 198 aa11.34□□□□□ -0.59
PCDHA8-202ENST00000531613 OBSCN-AS1Q96MR7 158 aa11.33□□□□□ -0.6
PCDHA8-202ENST00000531613 IGLV7-43P04211 117 aa11.33□□□□□ -0.6
PCDHA8-202ENST00000531613 LINC01600Q96MT4 127 aa11.33□□□□□ -0.6
PCDHA8-202ENST00000531613 ITPR3Q14573 2671 aa11.33□□□□□ -0.6
PCDHA8-202ENST00000531613 CNBPP62633 177 aaKnown RBP11.32□□□□□ -0.6
PCDHA8-202ENST00000531613 COA5Q86WW8 74 aa11.31□□□□□ -0.6
PCDHA8-202ENST00000531613 A0A1W2PNN7 141 aa11.31□□□□□ -0.6
PCDHA8-202ENST00000531613 ZNF575Q86XF7 245 aa11.31□□□□□ -0.6
PCDHA8-202ENST00000531613 PSORS1C2Q9UIG4 136 aa11.31□□□□□ -0.6
PCDHA8-202ENST00000531613 CASC10Q5T4H9 136 aa11.29□□□□□ -0.6
PCDHA8-202ENST00000531613 ANAPC11Q9NYG5 84 aa11.29□□□□□ -0.6
PCDHA8-202ENST00000531613 A0A0G2JQZ4 141 aa11.28□□□□□ -0.6
PCDHA8-202ENST00000531613 C9orf92A6NGG3 77 aa11.28□□□□□ -0.6
PCDHA8-202ENST00000531613 SPRR4Q96PI1 79 aa11.26□□□□□ -0.61
PCDHA8-202ENST00000531613 UQCR11O14957 56 aa11.23□□□□□ -0.61
PCDHA8-202ENST00000531613 C5orf42Q9H799 3197 aa11.21□□□□□ -0.61
PCDHA8-202ENST00000531613 CFAP46Q8IYW2 2715 aa11.21□□□□□ -0.62
PCDHA8-202ENST00000531613 KLKP1Q107X0 134 aa11.21□□□□□ -0.62
PCDHA8-202ENST00000531613 A8MUN3 132 aa11.21□□□□□ -0.62
PCDHA8-202ENST00000531613 CYP4F30PQ9H0H9 118 aa11.21□□□□□ -0.62
PCDHA8-202ENST00000531613 CHD7Q9P2D1 2997 aa11.19□□□□□ -0.62
PCDHA8-202ENST00000531613 STAB1Q9NY15 2570 aa11.19□□□□□ -0.62
PCDHA8-202ENST00000531613 HTTP42858 3142 aa11.18□□□□□ -0.62
PCDHA8-202ENST00000531613 A0A1W2PNM2 257 aa11.18□□□□□ -0.62
PCDHA8-202ENST00000531613 CENPEQ02224 2701 aa11.17□□□□□ -0.62
PCDHA8-202ENST00000531613 A0A0C4DFX4 3053 aa11.17□□□□□ -0.62
PCDHA8-202ENST00000531613 IGLV5-37A0A075B6J1 123 aa11.16□□□□□ -0.62
PCDHA8-202ENST00000531613 RBM12B-AS1Q9P1G2 102 aa11.13□□□□□ -0.63
PCDHA8-202ENST00000531613 IGLV5-48A0A075B6I7 105 aa11.1□□□□□ -0.63
PCDHA8-202ENST00000531613 TNP2Q05952 138 aa11.1□□□□□ -0.63
PCDHA8-202ENST00000531613 SPINT4Q6UDR6 99 aa11.09□□□□□ -0.63
PCDHA8-202ENST00000531613 MIR22HGQ0VDD5 57 aa11.08□□□□□ -0.64
PCDHA8-202ENST00000531613 H7BZZ5 65 aa11.05□□□□□ -0.64
PCDHA8-202ENST00000531613 CRIPTQ9P021 101 aa11.04□□□□□ -0.64
PCDHA8-202ENST00000531613 WIPF1O43516 503 aa11.03□□□□□ -0.64
PCDHA8-202ENST00000531613 SETXQ7Z333 2677 aaKnown RBP11.01□□□□□ -0.65
PCDHA8-202ENST00000531613 CD164Q04900 197 aa11□□□□□ -0.65
PCDHA8-202ENST00000531613 AKAP13Q12802 2813 aa11□□□□□ -0.65
PCDHA8-202ENST00000531613 FAM104AQ969W3 186 aa11□□□□□ -0.65
PCDHA8-202ENST00000531613 CHD9Q3L8U1 2897 aa10.99□□□□□ -0.65
PCDHA8-202ENST00000531613 Q8N1X5 172 aa10.99□□□□□ -0.65
PCDHA8-202ENST00000531613 SPANXA2-OT1Q8N9U9 137 aa10.99□□□□□ -0.65
PCDHA8-202ENST00000531613 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.98□□□□□ -0.65
PCDHA8-202ENST00000531613 CR1P17927 2039 aa10.98□□□□□ -0.65
PCDHA8-202ENST00000531613 TEP1Q99973 2627 aaKnown RBP10.97□□□□□ -0.65
PCDHA8-202ENST00000531613 BRCA2P51587 3418 aa10.96□□□□□ -0.65
PCDHA8-202ENST00000531613 LINC01554Q52M75 96 aa10.94□□□□□ -0.66
PCDHA8-202ENST00000531613 MKI67P46013 3256 aaKnown RBP10.94□□□□□ -0.66
PCDHA8-202ENST00000531613 Q6ZSA8 131 aa10.92□□□□□ -0.66
PCDHA8-202ENST00000531613 PRR26Q8N8Z3 221 aa10.92□□□□□ -0.66
PCDHA8-202ENST00000531613 IGLV7-46A0A075B6I9 117 aa10.9□□□□□ -0.66
PCDHA8-202ENST00000531613 TEX15Q9BXT5 2789 aa10.89□□□□□ -0.67
PCDHA8-202ENST00000531613 FAM229BQ4G0N7 80 aa10.89□□□□□ -0.67
PCDHA8-202ENST00000531613 CHD6Q8TD26 2715 aa10.87□□□□□ -0.67
PCDHA8-202ENST00000531613 A0A0D9SG42 100 aa10.86□□□□□ -0.67
PCDHA8-202ENST00000531613 RANBP2P49792 3224 aaKnown RBP10.86□□□□□ -0.67
PCDHA8-202ENST00000531613 OCR1Q9BZK8 76 aa10.85□□□□□ -0.67
PCDHA8-202ENST00000531613 PLAC8Q9NZF1 115 aa10.85□□□□□ -0.67
PCDHA8-202ENST00000531613 COL6A5A8TX70 2615 aa10.83□□□□□ -0.68
PCDHA8-202ENST00000531613 CDC42SE1Q9NRR8 79 aa10.83□□□□□ -0.68
PCDHA8-202ENST00000531613 TRANK1O15050 2925 aa10.81□□□□□ -0.68
PCDHA8-202ENST00000531613 LAMA2P24043 3122 aaKnown RBP10.81□□□□□ -0.68
PCDHA8-202ENST00000531613 LAMA3Q16787 3333 aa10.79□□□□□ -0.68
PCDHA8-202ENST00000531613 NBEAL1Q6ZS30 2694 aa10.79□□□□□ -0.68
PCDHA8-202ENST00000531613 SPRR1AP35321 89 aa10.78□□□□□ -0.68
PCDHA8-202ENST00000531613 KTN1-AS1Q86SY8 53 aa10.77□□□□□ -0.69
PCDHA8-202ENST00000531613 ZNF292O60281 2723 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms