RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 LOC105371267A0A1B0GV96 52 aa3.86□□□□□ -1.79
CD44-221ENST00000526000 A6NJY4 79 aa3.86□□□□□ -1.79
CD44-221ENST00000526000 NDUFC2O95298 119 aa3.86□□□□□ -1.79
CD44-221ENST00000526000 CTAG1AP78358 180 aa3.86□□□□□ -1.79
CD44-221ENST00000526000 LITAFQ99732 161 aa3.86□□□□□ -1.79
CD44-221ENST00000526000 CBY1Q9Y3M2 126 aa3.86□□□□□ -1.79
CD44-221ENST00000526000 TRBV10-2A0A0K0K1G8 114 aa3.85□□□□□ -1.79
CD44-221ENST00000526000 CRYGAP11844 174 aa3.85□□□□□ -1.79
CD44-221ENST00000526000 TAL2Q16559 108 aa3.85□□□□□ -1.79
CD44-221ENST00000526000 LINC00518Q8N0U6 118 aa3.85□□□□□ -1.79
CD44-221ENST00000526000 NKAPP1Q8N9T2 125 aa3.85□□□□□ -1.79
CD44-221ENST00000526000 UQCR10Q9UDW1 63 aa3.85□□□□□ -1.79
CD44-221ENST00000526000 MUC2Q02817 5179 aa3.84□□□□□ -1.79
CD44-221ENST00000526000 A0A0U1RRA0 63 aa3.84□□□□□ -1.79
CD44-221ENST00000526000 M0R378 163 aa3.84□□□□□ -1.79
CD44-221ENST00000526000 VPREB1P12018 145 aa3.84□□□□□ -1.79
CD44-221ENST00000526000 RPL28P46779 137 aaKnown RBP3.84□□□□□ -1.79
CD44-221ENST00000526000 KRTAP13-2Q52LG2 175 aa3.84□□□□□ -1.79
CD44-221ENST00000526000 LINC00308Q8TCZ7 52 aa3.84□□□□□ -1.79
CD44-221ENST00000526000 LINC00167Q96N53 147 aa3.84□□□□□ -1.79
CD44-221ENST00000526000 TTTY13Q9BZ97 58 aa3.84□□□□□ -1.79
CD44-221ENST00000526000 CDIP1Q9H305 208 aa3.84□□□□□ -1.79
CD44-221ENST00000526000 IGLV7-46A0A075B6I9 117 aa3.83□□□□□ -1.8
CD44-221ENST00000526000 BCE1O60756 84 aa3.83□□□□□ -1.8
CD44-221ENST00000526000 ADAMTSL4-AS1Q5T5F5 129 aa3.83□□□□□ -1.8
CD44-221ENST00000526000 MRPL55Q7Z7F7 128 aaKnown RBP3.83□□□□□ -1.8
CD44-221ENST00000526000 C14orf144Q96I85 54 aa3.83□□□□□ -1.8
CD44-221ENST00000526000 TSTD3H0UI37 97 aa3.82□□□□□ -1.8
CD44-221ENST00000526000 UBE2AP49459 152 aa3.82□□□□□ -1.8
CD44-221ENST00000526000 DAND5Q8N907 189 aa3.82□□□□□ -1.8
CD44-221ENST00000526000 LINC00304Q8N9R0 145 aa3.82□□□□□ -1.8
CD44-221ENST00000526000 HIST1H4GQ99525 98 aa3.82□□□□□ -1.8
CD44-221ENST00000526000 TRAV13-2A0A0B4J235 113 aa3.81□□□□□ -1.8
CD44-221ENST00000526000 SOSTDC1Q6X4U4 206 aa3.81□□□□□ -1.8
CD44-221ENST00000526000 MUSTN1Q8IVN3 82 aa3.81□□□□□ -1.8
CD44-221ENST00000526000 C12orf57Q99622 126 aa3.81□□□□□ -1.8
CD44-221ENST00000526000 TMEM126AQ9H061 195 aa3.81□□□□□ -1.8
CD44-221ENST00000526000 IGKV2-28A0A075B6P5 120 aa3.8□□□□□ -1.8
CD44-221ENST00000526000 PRYO14603 147 aa3.8□□□□□ -1.8
CD44-221ENST00000526000 IGKV2D-28P01615 120 aa3.8□□□□□ -1.8
CD44-221ENST00000526000 PRLHP81277 87 aa3.8□□□□□ -1.8
CD44-221ENST00000526000 HSD52Q0P140 79 aa3.8□□□□□ -1.8
CD44-221ENST00000526000 S100A7L2Q5SY68 101 aa3.8□□□□□ -1.8
CD44-221ENST00000526000 C2orf91Q6ZV80 131 aa3.8□□□□□ -1.8
CD44-221ENST00000526000 C3orf22Q8N5N4 141 aa3.8□□□□□ -1.8
CD44-221ENST00000526000 KCNQ1DNQ9H478 68 aa3.8□□□□□ -1.8
CD44-221ENST00000526000 FAT4Q6V0I7 4981 aa3.8□□□□□ -1.8
CD44-221ENST00000526000 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.79□□□□□ -1.8
CD44-221ENST00000526000 IGLV6-57P01721 117 aa3.79□□□□□ -1.8
CD44-221ENST00000526000 DDTP30046 118 aa3.79□□□□□ -1.8
CD44-221ENST00000526000 NPC2P61916 151 aa3.79□□□□□ -1.8
CD44-221ENST00000526000 XP32Q5T750 250 aa3.79□□□□□ -1.8
CD44-221ENST00000526000 FAM19A1Q7Z5A9 133 aa3.79□□□□□ -1.8
CD44-221ENST00000526000 CEND1Q8N111 149 aa3.79□□□□□ -1.8
CD44-221ENST00000526000 KRTAP4-8Q9BYQ9 185 aa3.79□□□□□ -1.8
CD44-221ENST00000526000 A0A0B4J2C4 111 aa3.78□□□□□ -1.8
CD44-221ENST00000526000 TRBV7-6A0A0J9YX20 115 aa3.78□□□□□ -1.8
CD44-221ENST00000526000 TRBV10-3A0A0K0K1G6 114 aa3.78□□□□□ -1.8
CD44-221ENST00000526000 A4D1N5 150 aa3.78□□□□□ -1.8
CD44-221ENST00000526000 NCR3O14931 201 aa3.78□□□□□ -1.8
CD44-221ENST00000526000 HINT1P49773 126 aaPredicted RBP3.78□□□□□ -1.8
CD44-221ENST00000526000 LINC00337Q8N6G1 96 aa3.78□□□□□ -1.8
CD44-221ENST00000526000 Q8NDZ9 215 aa3.78□□□□□ -1.8
CD44-221ENST00000526000 TRAV23DV6A0A075B6W5 121 aa3.77□□□□□ -1.81
CD44-221ENST00000526000 M0R143 59 aa3.77□□□□□ -1.81
CD44-221ENST00000526000 EIF4EBP3O60516 100 aaPredicted RBP3.77□□□□□ -1.81
CD44-221ENST00000526000 SPRR1AP35321 89 aa3.77□□□□□ -1.81
CD44-221ENST00000526000 KRTAP13-1Q8IUC0 172 aa3.77□□□□□ -1.81
CD44-221ENST00000526000 OR13C6PQ8NH95 151 aa3.77□□□□□ -1.81
CD44-221ENST00000526000 ETDCA0A1B0GVM5 59 aa3.76□□□□□ -1.81
CD44-221ENST00000526000 A6NDN8 102 aa3.76□□□□□ -1.81
CD44-221ENST00000526000 ZNF73O43830 326 aaPredicted RBP3.76□□□□□ -1.81
CD44-221ENST00000526000 TPRXLQ17RH7 258 aa3.76□□□□□ -1.81
CD44-221ENST00000526000 RAB37Q96AX2 223 aa3.76□□□□□ -1.81
CD44-221ENST00000526000 HIGD2AQ9BW72 106 aa3.76□□□□□ -1.81
CD44-221ENST00000526000 KRTAP4-1Q9BYQ7 146 aa3.76□□□□□ -1.81
CD44-221ENST00000526000 PRO1933Q9H354 126 aa3.76□□□□□ -1.81
CD44-221ENST00000526000 A0A1B0GWB2 263 aa3.75□□□□□ -1.81
CD44-221ENST00000526000 VAMP3Q15836 100 aa3.75□□□□□ -1.81
CD44-221ENST00000526000 FAM229BQ4G0N7 80 aa3.75□□□□□ -1.81
CD44-221ENST00000526000 KRTAP4-16G5E9R7 235 aaPredicted RBP3.74□□□□□ -1.81
CD44-221ENST00000526000 CFC1BP0CG36 223 aa3.74□□□□□ -1.81
CD44-221ENST00000526000 CFC1P0CG37 223 aa3.74□□□□□ -1.81
CD44-221ENST00000526000 FXYD2P54710 66 aa3.74□□□□□ -1.81
CD44-221ENST00000526000 LINC01547P58512 204 aaPredicted RBP3.74□□□□□ -1.81
CD44-221ENST00000526000 BVES-AS1Q5T3Y7 98 aa3.74□□□□□ -1.81
CD44-221ENST00000526000 NHP2Q9NX24 153 aaKnown RBP3.74□□□□□ -1.81
CD44-221ENST00000526000 PRO1854Q9UHT4 67 aa3.74□□□□□ -1.81
CD44-221ENST00000526000 MUC17Q685J3 4493 aa3.74□□□□□ -1.81
CD44-221ENST00000526000 SNCGO76070 127 aa3.73□□□□□ -1.81
CD44-221ENST00000526000 Q6ZRX8 168 aa3.73□□□□□ -1.81
CD44-221ENST00000526000 DHRS4-AS1Q9P1J3 65 aa3.73□□□□□ -1.81
CD44-221ENST00000526000 ZNF706Q9Y5V0 76 aaPredicted RBP3.73□□□□□ -1.81
CD44-221ENST00000526000 B5MCH6 92 aa3.72□□□□□ -1.81
CD44-221ENST00000526000 H0YGX0 51 aa3.72□□□□□ -1.81
CD44-221ENST00000526000 COX6CP09669 75 aa3.72□□□□□ -1.81
CD44-221ENST00000526000 COX7BP24311 80 aa3.72□□□□□ -1.81
CD44-221ENST00000526000 ELOF1P60002 83 aaKnown RBP3.72□□□□□ -1.81
CD44-221ENST00000526000 C6orf99Q4VX62 202 aa3.72□□□□□ -1.81
CD44-221ENST00000526000 Q8NBF4 154 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms