RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 UBE2L5PA0A1B0GUS4 154 aa-0.73□□□□□ -2.53
CSDE1-210ENST00000525878 H0Y9P7 68 aa-0.73□□□□□ -2.53
CSDE1-210ENST00000525878 K7EP13 123 aa-0.73□□□□□ -2.53
CSDE1-210ENST00000525878 GNG7O60262 68 aa-0.73□□□□□ -2.53
CSDE1-210ENST00000525878 APOC2P02655 101 aa-0.73□□□□□ -2.53
CSDE1-210ENST00000525878 COX6CP09669 75 aa-0.73□□□□□ -2.53
CSDE1-210ENST00000525878 FGF7P21781 194 aa-0.73□□□□□ -2.53
CSDE1-210ENST00000525878 ATP5EP56381 51 aaPredicted RBP-0.73□□□□□ -2.53
CSDE1-210ENST00000525878 UBE2L3P68036 154 aaKnown RBP-0.73□□□□□ -2.53
CSDE1-210ENST00000525878 HSD52Q0P140 79 aa-0.73□□□□□ -2.53
CSDE1-210ENST00000525878 C9orf153Q5TBE3 101 aa-0.73□□□□□ -2.53
CSDE1-210ENST00000525878 HEPN1Q6WQI6 88 aa-0.73□□□□□ -2.53
CSDE1-210ENST00000525878 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.73□□□□□ -2.53
CSDE1-210ENST00000525878 LZICQ8WZA0 190 aa-0.73□□□□□ -2.53
CSDE1-210ENST00000525878 PFDN5Q99471 154 aa-0.73□□□□□ -2.53
CSDE1-210ENST00000525878 DPH3P1Q9H4G8 78 aa-0.73□□□□□ -2.53
CSDE1-210ENST00000525878 MANBALQ9NQG1 85 aa-0.73□□□□□ -2.53
CSDE1-210ENST00000525878 PRO1854Q9UHT4 67 aa-0.73□□□□□ -2.53
CSDE1-210ENST00000525878 CSMD2Q7Z408 3487 aa-0.73□□□□□ -2.53
CSDE1-210ENST00000525878 ITSN1Q15811 1721 aa-0.74□□□□□ -2.53
CSDE1-210ENST00000525878 A0A0G2JND7 137 aa-0.74□□□□□ -2.53
CSDE1-210ENST00000525878 SPTY2D1-AS1A0A0U1RR47 76 aa-0.74□□□□□ -2.53
CSDE1-210ENST00000525878 LOC105371267A0A1B0GV96 52 aa-0.74□□□□□ -2.53
CSDE1-210ENST00000525878 H0YAA0 97 aa-0.74□□□□□ -2.53
CSDE1-210ENST00000525878 TRAPPC2P0DI81 140 aa-0.74□□□□□ -2.53
CSDE1-210ENST00000525878 TRAPPC2BP0DI82 140 aa-0.74□□□□□ -2.53
CSDE1-210ENST00000525878 SNCAP37840 140 aa-0.74□□□□□ -2.53
CSDE1-210ENST00000525878 GNG11P61952 73 aa-0.74□□□□□ -2.53
CSDE1-210ENST00000525878 SELENOWP63302 87 aa-0.74□□□□□ -2.53
CSDE1-210ENST00000525878 DEFA5Q01523 94 aa-0.74□□□□□ -2.53
CSDE1-210ENST00000525878 DEFB107AQ8IZN7 70 aa-0.74□□□□□ -2.53
CSDE1-210ENST00000525878 PAIP2BQ9ULR5 123 aaKnown RBP-0.74□□□□□ -2.53
CSDE1-210ENST00000525878 KTN1Q86UP2 1357 aaKnown RBP-0.74□□□□□ -2.53
CSDE1-210ENST00000525878 DMXL2Q8TDJ6 3036 aa-0.74□□□□□ -2.53
CSDE1-210ENST00000525878 MAGI2Q86UL8 1455 aa-0.74□□□□□ -2.53
CSDE1-210ENST00000525878 NRXN1Q9ULB1 1477 aa-0.74□□□□□ -2.53
CSDE1-210ENST00000525878 FAM135AQ9P2D6 1515 aa-0.74□□□□□ -2.53
CSDE1-210ENST00000525878 EIF4G3O43432 1585 aaKnown RBP-0.74□□□□□ -2.53
CSDE1-210ENST00000525878 NWD1Q149M9 1564 aa-0.74□□□□□ -2.53
CSDE1-210ENST00000525878 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.74□□□□□ -2.53
CSDE1-210ENST00000525878 PARP4Q9UKK3 1724 aaKnown RBP-0.75□□□□□ -2.53
CSDE1-210ENST00000525878 ANKRD26Q9UPS8 1709 aa-0.75□□□□□ -2.53
CSDE1-210ENST00000525878 TRBV7-7A0A0K0K1E9 115 aa-0.75□□□□□ -2.53
CSDE1-210ENST00000525878 C7orf77A4D0Y5 90 aa-0.75□□□□□ -2.53
CSDE1-210ENST00000525878 H3BQF6 201 aa-0.75□□□□□ -2.53
CSDE1-210ENST00000525878 NDUFA2O43678 99 aa-0.75□□□□□ -2.53
CSDE1-210ENST00000525878 MT1XP80297 61 aa-0.75□□□□□ -2.53
CSDE1-210ENST00000525878 C12orf57Q99622 126 aa-0.75□□□□□ -2.53
CSDE1-210ENST00000525878 S4R3F8 94 aa-0.75□□□□□ -2.53
CSDE1-210ENST00000525878 NAIPQ13075 1403 aa-0.75□□□□□ -2.53
CSDE1-210ENST00000525878 TMEM131LA2VDJ0 1609 aa-0.75□□□□□ -2.53
CSDE1-210ENST00000525878 DEPDC5O75140 1603 aa-0.75□□□□□ -2.53
CSDE1-210ENST00000525878 TJP1Q07157 1748 aa-0.75□□□□□ -2.53
CSDE1-210ENST00000525878 ARFGEF2Q9Y6D5 1785 aa-0.75□□□□□ -2.53
CSDE1-210ENST00000525878 NAP1L6A6NFF2 107 aa-0.76□□□□□ -2.53
CSDE1-210ENST00000525878 FAM25AB3EWG3 89 aa-0.76□□□□□ -2.53
CSDE1-210ENST00000525878 FAM25CB3EWG5 89 aa-0.76□□□□□ -2.53
CSDE1-210ENST00000525878 FAM25GB3EWG6 89 aa-0.76□□□□□ -2.53
CSDE1-210ENST00000525878 NDUFA3O95167 84 aa-0.76□□□□□ -2.53
CSDE1-210ENST00000525878 ARMS2P0C7Q2 107 aa-0.76□□□□□ -2.53
CSDE1-210ENST00000525878 ASIPP42127 132 aa-0.76□□□□□ -2.53
CSDE1-210ENST00000525878 PP6455Q8WZ26 134 aa-0.76□□□□□ -2.53
CSDE1-210ENST00000525878 ABCC5O15440 1437 aa-0.76□□□□□ -2.53
CSDE1-210ENST00000525878 PZPP20742 1482 aa-0.76□□□□□ -2.53
CSDE1-210ENST00000525878 LRRC9Q6ZRR7 1453 aa-0.76□□□□□ -2.53
CSDE1-210ENST00000525878 MLH3Q9UHC1 1453 aa-0.76□□□□□ -2.53
CSDE1-210ENST00000525878 PRDM15P57071 1507 aaPredicted RBP-0.76□□□□□ -2.53
CSDE1-210ENST00000525878 ABCC2Q92887 1545 aa-0.76□□□□□ -2.53
CSDE1-210ENST00000525878 LRRC7Q96NW7 1537 aa-0.76□□□□□ -2.53
CSDE1-210ENST00000525878 MYO3AQ8NEV4 1616 aa-0.76□□□□□ -2.53
CSDE1-210ENST00000525878 PLCH1Q4KWH8 1693 aa-0.76□□□□□ -2.53
CSDE1-210ENST00000525878 CDC42BPAQ5VT25 1732 aa-0.76□□□□□ -2.53
CSDE1-210ENST00000525878 AKAP12Q02952 1782 aa-0.77□□□□□ -2.53
CSDE1-210ENST00000525878 ZC3H13Q5T200 1668 aaKnown RBP-0.77□□□□□ -2.53
CSDE1-210ENST00000525878 ITSN2Q9NZM3 1697 aa-0.77□□□□□ -2.53
CSDE1-210ENST00000525878 RAPGEF2Q9Y4G8 1499 aa-0.77□□□□□ -2.53
CSDE1-210ENST00000525878 TRBV25-1A0A075B6N4 114 aa-0.77□□□□□ -2.53
CSDE1-210ENST00000525878 AKAIN1P0CW23 69 aa-0.77□□□□□ -2.53
CSDE1-210ENST00000525878 DEFB1P60022 68 aa-0.77□□□□□ -2.53
CSDE1-210ENST00000525878 COX6B2Q6YFQ2 88 aa-0.77□□□□□ -2.53
CSDE1-210ENST00000525878 CGREF1Q99674 301 aa-0.77□□□□□ -2.53
CSDE1-210ENST00000525878 CACFD1Q9UGQ2 172 aa-0.77□□□□□ -2.53
CSDE1-210ENST00000525878 ATMQ13315 3056 aa-0.77□□□□□ -2.53
CSDE1-210ENST00000525878 TOGARAM1Q9Y4F4 1720 aa-0.78□□□□□ -2.53
CSDE1-210ENST00000525878 ZFYVE16Q7Z3T8 1539 aa-0.78□□□□□ -2.53
CSDE1-210ENST00000525878 hADV29S1A0JD25 119 aa-0.78□□□□□ -2.53
CSDE1-210ENST00000525878 CRYM-AS1A6NIL9 109 aa-0.78□□□□□ -2.53
CSDE1-210ENST00000525878 TMEM262E9PQX1 116 aa-0.78□□□□□ -2.53
CSDE1-210ENST00000525878 H3BQ15 152 aa-0.78□□□□□ -2.53
CSDE1-210ENST00000525878 H7BZZ5 65 aa-0.78□□□□□ -2.53
CSDE1-210ENST00000525878 GNGT1P63211 74 aa-0.78□□□□□ -2.53
CSDE1-210ENST00000525878 PRLHP81277 87 aa-0.78□□□□□ -2.53
CSDE1-210ENST00000525878 DEFB110Q30KQ9 67 aa-0.78□□□□□ -2.53
CSDE1-210ENST00000525878 NMSQ5H8A3 153 aa-0.78□□□□□ -2.53
CSDE1-210ENST00000525878 PSMG4Q5JS54 123 aa-0.78□□□□□ -2.53
CSDE1-210ENST00000525878 IER3IP1Q9Y5U9 82 aa-0.78□□□□□ -2.53
CSDE1-210ENST00000525878 LY75O60449 1722 aa-0.78□□□□□ -2.53
CSDE1-210ENST00000525878 CRYBG3Q68DQ2 2970 aa-0.78□□□□□ -2.53
CSDE1-210ENST00000525878 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.79□□□□□ -2.54
CSDE1-210ENST00000525878 ROCK2O75116 1388 aaKnown RBP-0.79□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms