RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 C2orf66Q6UXQ4 117 aa5.02□□□□□ -1.61
HDAC3-216ENST00000523088 ZNF625Q96I27 306 aaPredicted RBP5.02□□□□□ -1.61
HDAC3-216ENST00000523088 LINC00167Q96N53 147 aa5.02□□□□□ -1.61
HDAC3-216ENST00000523088 PLAC8Q9NZF1 115 aa5.02□□□□□ -1.61
HDAC3-216ENST00000523088 ORMDL1Q9P0S3 153 aa5.02□□□□□ -1.61
HDAC3-216ENST00000523088 LINC01558Q9Y6Z2 57 aa5.02□□□□□ -1.61
HDAC3-216ENST00000523088 CNBPP62633 177 aaKnown RBP5.01□□□□□ -1.61
HDAC3-216ENST00000523088 PRCDQ00LT1 54 aa5.01□□□□□ -1.61
HDAC3-216ENST00000523088 WT1-ASQ06250 92 aa5.01□□□□□ -1.61
HDAC3-216ENST00000523088 RPL36ALQ969Q0 106 aaKnown RBP5.01□□□□□ -1.61
HDAC3-216ENST00000523088 PRAC1Q96KF2 57 aa5.01□□□□□ -1.61
HDAC3-216ENST00000523088 LENEPQ9Y5L5 61 aa5.01□□□□□ -1.61
HDAC3-216ENST00000523088 MUC4Q99102 2169 aa5□□□□□ -1.61
HDAC3-216ENST00000523088 IGLV5-45A0A087WSX0 123 aa5□□□□□ -1.61
HDAC3-216ENST00000523088 IGHV3-21A0A0B4J1V1 117 aa5□□□□□ -1.61
HDAC3-216ENST00000523088 TRAV21A0A0B4J279 112 aa5□□□□□ -1.61
HDAC3-216ENST00000523088 IGHV3-23P01764 117 aa5□□□□□ -1.61
HDAC3-216ENST00000523088 PRB4P10163 310 aaPredicted RBP5□□□□□ -1.61
HDAC3-216ENST00000523088 CAMK2N2Q96S95 79 aa5□□□□□ -1.61
HDAC3-216ENST00000523088 LYSTQ99698 3801 aa4.99□□□□□ -1.61
HDAC3-216ENST00000523088 IGHV3OR16-8A0A075B7F1 116 aa4.99□□□□□ -1.61
HDAC3-216ENST00000523088 A0A087WSZ3 146 aa4.99□□□□□ -1.61
HDAC3-216ENST00000523088 K7EIM0 57 aa4.99□□□□□ -1.61
HDAC3-216ENST00000523088 K7ERS5 55 aa4.99□□□□□ -1.61
HDAC3-216ENST00000523088 CSMD3Q7Z407 3707 aa4.98□□□□□ -1.61
HDAC3-216ENST00000523088 RYR3Q15413 4870 aa4.98□□□□□ -1.61
HDAC3-216ENST00000523088 KRTAP4-16G5E9R7 235 aaPredicted RBP4.98□□□□□ -1.61
HDAC3-216ENST00000523088 STARD9Q9P2P6 4700 aa4.98□□□□□ -1.61
HDAC3-216ENST00000523088 IGHV3-73A0A0B4J1V6 119 aa4.97□□□□□ -1.61
HDAC3-216ENST00000523088 IGHV7-4-1A0A0J9YVY3 117 aa4.97□□□□□ -1.61
HDAC3-216ENST00000523088 NUPR2A6NF83 97 aa4.97□□□□□ -1.61
HDAC3-216ENST00000523088 F8W735 103 aaPredicted RBP4.97□□□□□ -1.61
HDAC3-216ENST00000523088 I3L2K1 104 aa4.97□□□□□ -1.61
HDAC3-216ENST00000523088 CRIP1P50238 77 aa4.97□□□□□ -1.61
HDAC3-216ENST00000523088 PRR4Q16378 134 aa4.97□□□□□ -1.61
HDAC3-216ENST00000523088 LINC00208Q96KT6 92 aa4.97□□□□□ -1.61
HDAC3-216ENST00000523088 LRCOL1A6NCL2 159 aa4.96□□□□□ -1.62
HDAC3-216ENST00000523088 TSHBP01222 138 aa4.96□□□□□ -1.62
HDAC3-216ENST00000523088 MIR7-3HGQ8N6C7 128 aa4.96□□□□□ -1.62
HDAC3-216ENST00000523088 RHPN1-AS1Q9BWJ2 59 aa4.96□□□□□ -1.62
HDAC3-216ENST00000523088 WFDC10AQ9H1F0 79 aa4.96□□□□□ -1.62
HDAC3-216ENST00000523088 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.96□□□□□ -1.62
HDAC3-216ENST00000523088 TRBV10-1A0A0K0K1A3 114 aa4.95□□□□□ -1.62
HDAC3-216ENST00000523088 ODF3L2Q3SX64 289 aa4.95□□□□□ -1.62
HDAC3-216ENST00000523088 HIGD2AQ9BW72 106 aa4.95□□□□□ -1.62
HDAC3-216ENST00000523088 DYNC2H1Q8NCM8 4307 aaKnown RBP4.95□□□□□ -1.62
HDAC3-216ENST00000523088 TENM2Q9NT68 2774 aa4.94□□□□□ -1.62
HDAC3-216ENST00000523088 H3BPC8 53 aa4.94□□□□□ -1.62
HDAC3-216ENST00000523088 MIR22HGQ0VDD5 57 aa4.94□□□□□ -1.62
HDAC3-216ENST00000523088 Q6ZQT0 140 aa4.94□□□□□ -1.62
HDAC3-216ENST00000523088 LINC00308Q8TCZ7 52 aa4.94□□□□□ -1.62
HDAC3-216ENST00000523088 MSRB1Q9NZV6 116 aa4.94□□□□□ -1.62
HDAC3-216ENST00000523088 IGKV1OR2-108A0A075B7D4 117 aa4.93□□□□□ -1.62
HDAC3-216ENST00000523088 A0A1W2PNM2 257 aa4.93□□□□□ -1.62
HDAC3-216ENST00000523088 DEFB135Q30KP9 77 aa4.93□□□□□ -1.62
HDAC3-216ENST00000523088 Q8NAQ8 132 aa4.93□□□□□ -1.62
HDAC3-216ENST00000523088 COX7B2Q8TF08 81 aa4.93□□□□□ -1.62
HDAC3-216ENST00000523088 C8orf17Q9NRJ1 99 aa4.93□□□□□ -1.62
HDAC3-216ENST00000523088 RYR2Q92736 4967 aa4.93□□□□□ -1.62
HDAC3-216ENST00000523088 SACSQ9NZJ4 4579 aa4.93□□□□□ -1.62
HDAC3-216ENST00000523088 IGLV1-50A0A075B6I6 118 aa4.92□□□□□ -1.62
HDAC3-216ENST00000523088 A0A0J9YWU9 116 aa4.92□□□□□ -1.62
HDAC3-216ENST00000523088 NDUFA1O15239 70 aa4.92□□□□□ -1.62
HDAC3-216ENST00000523088 NCR3O14931 201 aa4.91□□□□□ -1.62
HDAC3-216ENST00000523088 LECT2O14960 151 aa4.91□□□□□ -1.62
HDAC3-216ENST00000523088 HAMPP81172 84 aa4.91□□□□□ -1.62
HDAC3-216ENST00000523088 SPAG11BQ08648 103 aa4.91□□□□□ -1.62
HDAC3-216ENST00000523088 SPINK9Q5DT21 86 aa4.91□□□□□ -1.62
HDAC3-216ENST00000523088 RNASE13Q5GAN3 156 aaKnown RBP4.91□□□□□ -1.62
HDAC3-216ENST00000523088 SPAG11AQ6PDA7 123 aa4.91□□□□□ -1.62
HDAC3-216ENST00000523088 CHCHD7Q9BUK0 85 aa4.91□□□□□ -1.62
HDAC3-216ENST00000523088 IGKV3-7A0A075B6H7 116 aa4.9□□□□□ -1.63
HDAC3-216ENST00000523088 IGKV1-17P01599 117 aa4.9□□□□□ -1.63
HDAC3-216ENST00000523088 DEFB131AP59861 70 aa4.9□□□□□ -1.63
HDAC3-216ENST00000523088 LUZP6Q538Z0 58 aa4.9□□□□□ -1.63
HDAC3-216ENST00000523088 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.9□□□□□ -1.63
HDAC3-216ENST00000523088 ADM2Q7Z4H4 148 aa4.9□□□□□ -1.63
HDAC3-216ENST00000523088 DNAH1Q9P2D7 4330 aa4.9□□□□□ -1.63
HDAC3-216ENST00000523088 IGLV10-54A0A075B6I4 117 aa4.89□□□□□ -1.63
HDAC3-216ENST00000523088 IGHV3-49A0A0A0MS15 119 aa4.89□□□□□ -1.63
HDAC3-216ENST00000523088 C9orf129Q5T035 196 aaKnown RBP4.89□□□□□ -1.63
HDAC3-216ENST00000523088 CSAG1Q6PB30 78 aa4.89□□□□□ -1.63
HDAC3-216ENST00000523088 ALMS1Q8TCU4 4167 aa4.89□□□□□ -1.63
HDAC3-216ENST00000523088 A8MWP4 228 aa4.88□□□□□ -1.63
HDAC3-216ENST00000523088 GAS8-AS1O95177 125 aa4.88□□□□□ -1.63
HDAC3-216ENST00000523088 REG3GQ6UW15 175 aa4.88□□□□□ -1.63
HDAC3-216ENST00000523088 IGLV5-52A0A0A0MRZ9 124 aa4.87□□□□□ -1.63
HDAC3-216ENST00000523088 IGHV3-66A0A0C4DH42 116 aa4.87□□□□□ -1.63
HDAC3-216ENST00000523088 IGKV2-29A2NJV5 120 aaPredicted RBP4.87□□□□□ -1.63
HDAC3-216ENST00000523088 LY6G6CO95867 125 aa4.87□□□□□ -1.63
HDAC3-216ENST00000523088 Q6ZR54 194 aa4.87□□□□□ -1.63
HDAC3-216ENST00000523088 PLECQ15149 4684 aaKnown RBP4.86□□□□□ -1.63
HDAC3-216ENST00000523088 IGHV3-53P01767 116 aa4.86□□□□□ -1.63
HDAC3-216ENST00000523088 POLR2KP53803 58 aaKnown RBP4.86□□□□□ -1.63
HDAC3-216ENST00000523088 HYDINQ4G0P3 5121 aa4.86□□□□□ -1.63
HDAC3-216ENST00000523088 A0A087WYN8 130 aa4.85□□□□□ -1.63
HDAC3-216ENST00000523088 ETDCA0A1B0GVM5 59 aa4.85□□□□□ -1.63
HDAC3-216ENST00000523088 C1orf137Q5JT78 98 aa4.85□□□□□ -1.63
HDAC3-216ENST00000523088 C9orf47Q6ZRZ4 202 aa4.85□□□□□ -1.63
HDAC3-216ENST00000523088 CAMK2N1Q7Z7J9 78 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms