RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 GNB1LQ9BYB4 327 aa3.24□□□□□ -1.89
PABPC1-216ENST00000520868 CST9LQ9H4G1 147 aa3.24□□□□□ -1.89
PABPC1-216ENST00000520868 SND1-IT1Q9HBX3 110 aa3.24□□□□□ -1.89
PABPC1-216ENST00000520868 H3BRM9 83 aa3.23□□□□□ -1.89
PABPC1-216ENST00000520868 PMVKQ15126 192 aa3.23□□□□□ -1.89
PABPC1-216ENST00000520868 Q8NDZ9 215 aa3.23□□□□□ -1.89
PABPC1-216ENST00000520868 SPRR4Q96PI1 79 aa3.23□□□□□ -1.89
PABPC1-216ENST00000520868 ERG28Q9UKR5 140 aa3.23□□□□□ -1.89
PABPC1-216ENST00000520868 NDUFA6P56556 154 aa3.22□□□□□ -1.89
PABPC1-216ENST00000520868 A0A0U1RRA0 63 aa3.21□□□□□ -1.9
PABPC1-216ENST00000520868 SPINK1P00995 79 aa3.21□□□□□ -1.9
PABPC1-216ENST00000520868 SMCR5Q8TEV8 140 aa3.21□□□□□ -1.9
PABPC1-216ENST00000520868 ZNF706Q9Y5V0 76 aaPredicted RBP3.21□□□□□ -1.9
PABPC1-216ENST00000520868 A0A1B0GVG6 124 aa3.2□□□□□ -1.9
PABPC1-216ENST00000520868 LINC01549A6NIU2 74 aa3.2□□□□□ -1.9
PABPC1-216ENST00000520868 IGLC3P0DOY3 106 aa3.2□□□□□ -1.9
PABPC1-216ENST00000520868 ZNF22P17026 224 aaPredicted RBP3.2□□□□□ -1.9
PABPC1-216ENST00000520868 LINC00158P58513 81 aa3.2□□□□□ -1.9
PABPC1-216ENST00000520868 COX17Q14061 63 aa3.2□□□□□ -1.9
PABPC1-216ENST00000520868 LCE1CQ5T751 118 aa3.2□□□□□ -1.9
PABPC1-216ENST00000520868 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
PABPC1-216ENST00000520868 FA2HQ7L5A8 372 aa3.2□□□□□ -1.9
PABPC1-216ENST00000520868 SMCO4Q9NRQ5 59 aa3.2□□□□□ -1.9
PABPC1-216ENST00000520868 LINC01546A6NGU7 62 aa3.19□□□□□ -1.9
PABPC1-216ENST00000520868 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
PABPC1-216ENST00000520868 NDUFA12Q9UI09 145 aa3.19□□□□□ -1.9
PABPC1-216ENST00000520868 ETDCA0A1B0GVM5 59 aa3.18□□□□□ -1.9
PABPC1-216ENST00000520868 C11orf86A6NJI1 115 aa3.18□□□□□ -1.9
PABPC1-216ENST00000520868 NCR3O14931 201 aa3.18□□□□□ -1.9
PABPC1-216ENST00000520868 ATP6V1G1O75348 118 aa3.18□□□□□ -1.9
PABPC1-216ENST00000520868 SERF1AO75920 110 aa3.18□□□□□ -1.9
PABPC1-216ENST00000520868 MOBPQ13875 183 aa3.18□□□□□ -1.9
PABPC1-216ENST00000520868 TMEM170BQ5T4T1 132 aa3.18□□□□□ -1.9
PABPC1-216ENST00000520868 BOD1L2Q8IYS8 172 aa3.18□□□□□ -1.9
PABPC1-216ENST00000520868 LINC00518Q8N0U6 118 aa3.18□□□□□ -1.9
PABPC1-216ENST00000520868 IGLV8-61A0A075B6I0 122 aa3.17□□□□□ -1.9
PABPC1-216ENST00000520868 SLC25A20O43772 301 aa3.17□□□□□ -1.9
PABPC1-216ENST00000520868 SMIM13P0DJ93 91 aa3.17□□□□□ -1.9
PABPC1-216ENST00000520868 FABP9Q0Z7S8 132 aa3.17□□□□□ -1.9
PABPC1-216ENST00000520868 LINC00483Q53H64 154 aa3.17□□□□□ -1.9
PABPC1-216ENST00000520868 SSBP3-AS1Q7Z2R9 100 aa3.17□□□□□ -1.9
PABPC1-216ENST00000520868 BAGE3Q86Y29 109 aa3.17□□□□□ -1.9
PABPC1-216ENST00000520868 TRAV9-1A0A075B6T8 112 aa3.16□□□□□ -1.9
PABPC1-216ENST00000520868 A0A096LNJ9 63 aa3.16□□□□□ -1.9
PABPC1-216ENST00000520868 TRBV10-3A0A0K0K1G6 114 aa3.16□□□□□ -1.9
PABPC1-216ENST00000520868 ERC2-IT1O76042 136 aa3.16□□□□□ -1.9
PABPC1-216ENST00000520868 SPRR1AP35321 89 aa3.16□□□□□ -1.9
PABPC1-216ENST00000520868 MT1HP80294 61 aa3.16□□□□□ -1.9
PABPC1-216ENST00000520868 PMCHL1Q16048 86 aa3.16□□□□□ -1.9
PABPC1-216ENST00000520868 MEIG1Q5JSS6 88 aa3.16□□□□□ -1.9
PABPC1-216ENST00000520868 SFTA2Q6UW10 78 aa3.16□□□□□ -1.9
PABPC1-216ENST00000520868 FAM19A2Q8N3H0 131 aa3.16□□□□□ -1.9
PABPC1-216ENST00000520868 MIR7-3HGQ8N6C7 128 aa3.16□□□□□ -1.9
PABPC1-216ENST00000520868 KCNQ1DNQ9H478 68 aa3.16□□□□□ -1.9
PABPC1-216ENST00000520868 KRTAP4-16G5E9R7 235 aaPredicted RBP3.15□□□□□ -1.91
PABPC1-216ENST00000520868 HBDP02042 147 aa3.15□□□□□ -1.91
PABPC1-216ENST00000520868 LINC00614P0C842 121 aa3.15□□□□□ -1.91
PABPC1-216ENST00000520868 S100PP25815 95 aa3.15□□□□□ -1.91
PABPC1-216ENST00000520868 RPS29P62273 56 aaKnown RBP3.15□□□□□ -1.91
PABPC1-216ENST00000520868 KRTAP19-2Q3LHN2 52 aa3.15□□□□□ -1.91
PABPC1-216ENST00000520868 PCOTHQ58A44 107 aa3.15□□□□□ -1.91
PABPC1-216ENST00000520868 CEND1Q8N111 149 aa3.15□□□□□ -1.91
PABPC1-216ENST00000520868 CHTOPQ9Y3Y2 248 aaKnown RBP3.15□□□□□ -1.91
PABPC1-216ENST00000520868 TMEM223A0PJW6 202 aa3.14□□□□□ -1.91
PABPC1-216ENST00000520868 S100A12P80511 92 aa3.14□□□□□ -1.91
PABPC1-216ENST00000520868 C9orf153Q5TBE3 101 aa3.14□□□□□ -1.91
PABPC1-216ENST00000520868 FLGP20930 4061 aaPredicted RBP3.14□□□□□ -1.91
PABPC1-216ENST00000520868 TMEM218A2RU14 115 aa3.13□□□□□ -1.91
PABPC1-216ENST00000520868 C9orf92A6NGG3 77 aa3.13□□□□□ -1.91
PABPC1-216ENST00000520868 DDTP30046 118 aa3.13□□□□□ -1.91
PABPC1-216ENST00000520868 COX19Q49B96 90 aa3.13□□□□□ -1.91
PABPC1-216ENST00000520868 C18orf32Q8TCD1 76 aa3.13□□□□□ -1.91
PABPC1-216ENST00000520868 Q9BRP9 147 aa3.13□□□□□ -1.91
PABPC1-216ENST00000520868 SEC11CQ9BY50 192 aa3.13□□□□□ -1.91
PABPC1-216ENST00000520868 HERV-K104P63124 156 aa3.12□□□□□ -1.91
PABPC1-216ENST00000520868 HRCT1Q6UXD1 115 aa3.12□□□□□ -1.91
PABPC1-216ENST00000520868 TRAPPC1Q9Y5R8 145 aa3.12□□□□□ -1.91
PABPC1-216ENST00000520868 LINC00587B1AMM8 73 aa3.11□□□□□ -1.91
PABPC1-216ENST00000520868 M0R2T5 61 aa3.11□□□□□ -1.91
PABPC1-216ENST00000520868 CLLU1Q5K131 121 aa3.11□□□□□ -1.91
PABPC1-216ENST00000520868 Q6ZRX8 168 aa3.11□□□□□ -1.91
PABPC1-216ENST00000520868 ST20-AS1Q8NBB2 130 aa3.11□□□□□ -1.91
PABPC1-216ENST00000520868 MAP1LC3CQ9BXW4 147 aa3.11□□□□□ -1.91
PABPC1-216ENST00000520868 TRAV12-1A0A0B4J245 112 aa3.1□□□□□ -1.91
PABPC1-216ENST00000520868 MYMXA0A1B0GTQ4 84 aa3.1□□□□□ -1.91
PABPC1-216ENST00000520868 JOSD1Q15040 202 aaPredicted RBP3.1□□□□□ -1.91
PABPC1-216ENST00000520868 S100A7L2Q5SY68 101 aa3.1□□□□□ -1.91
PABPC1-216ENST00000520868 UQCC3Q6UW78 93 aa3.1□□□□□ -1.91
PABPC1-216ENST00000520868 Q8N9L7 120 aa3.1□□□□□ -1.91
PABPC1-216ENST00000520868 TRAV23DV6A0A075B6W5 121 aa3.09□□□□□ -1.91
PABPC1-216ENST00000520868 LOC107984156A0A0G2JMH3 177 aa3.09□□□□□ -1.91
PABPC1-216ENST00000520868 TRBV10-2A0A0K0K1G8 114 aa3.09□□□□□ -1.91
PABPC1-216ENST00000520868 H0Y8G0 127 aa3.09□□□□□ -1.91
PABPC1-216ENST00000520868 IGLV6-57P01721 117 aa3.09□□□□□ -1.91
PABPC1-216ENST00000520868 COX6B2Q6YFQ2 88 aa3.09□□□□□ -1.91
PABPC1-216ENST00000520868 ARL17AQ8IVW1 177 aa3.09□□□□□ -1.91
PABPC1-216ENST00000520868 IFI27L1Q96BM0 104 aa3.09□□□□□ -1.91
PABPC1-216ENST00000520868 SSPOA2VEC9 5147 aa3.08□□□□□ -1.92
PABPC1-216ENST00000520868 LEPROTO15243 131 aa3.08□□□□□ -1.92
PABPC1-216ENST00000520868 ZNF73O43830 326 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms