RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 Q8NDZ9 215 aa5.47□□□□□ -1.53
VAPB-206ENST00000520497 LINC00474Q9P2X8 69 aa5.47□□□□□ -1.53
VAPB-206ENST00000520497 KIAA1109Q2LD37 5005 aa5.47□□□□□ -1.53
VAPB-206ENST00000520497 PKD1P98161 4303 aa5.46□□□□□ -1.53
VAPB-206ENST00000520497 TRAV23DV6A0A075B6W5 121 aa5.46□□□□□ -1.54
VAPB-206ENST00000520497 C16orf90A8MZG2 172 aa5.46□□□□□ -1.54
VAPB-206ENST00000520497 H3BT86 120 aa5.46□□□□□ -1.54
VAPB-206ENST00000520497 M0QXV9 152 aa5.46□□□□□ -1.54
VAPB-206ENST00000520497 SLC25A20O43772 301 aa5.46□□□□□ -1.54
VAPB-206ENST00000520497 GHRHP01286 108 aa5.46□□□□□ -1.54
VAPB-206ENST00000520497 IGLV6-57P01721 117 aa5.46□□□□□ -1.54
VAPB-206ENST00000520497 PRR3P79522 188 aaKnown RBP5.46□□□□□ -1.54
VAPB-206ENST00000520497 LCE1DQ5T752 114 aa5.46□□□□□ -1.54
VAPB-206ENST00000520497 CLEC2BQ92478 149 aa5.46□□□□□ -1.54
VAPB-206ENST00000520497 DIRC1Q969H9 104 aa5.46□□□□□ -1.54
VAPB-206ENST00000520497 PCLOQ9Y6V0 5065 aa5.46□□□□□ -1.54
VAPB-206ENST00000520497 IGLV5-37A0A075B6J1 123 aa5.45□□□□□ -1.54
VAPB-206ENST00000520497 A0A096LNI7 61 aa5.45□□□□□ -1.54
VAPB-206ENST00000520497 TRBV10-3A0A0K0K1G6 114 aa5.45□□□□□ -1.54
VAPB-206ENST00000520497 J3QR89 54 aa5.45□□□□□ -1.54
VAPB-206ENST00000520497 SDIM1Q6ZPB5 146 aa5.45□□□□□ -1.54
VAPB-206ENST00000520497 LINC00336Q6ZUF6 198 aa5.45□□□□□ -1.54
VAPB-206ENST00000520497 DNAH11Q96DT5 4516 aa5.44□□□□□ -1.54
VAPB-206ENST00000520497 TRBV7-6A0A0J9YX20 115 aa5.44□□□□□ -1.54
VAPB-206ENST00000520497 H3BQ85 93 aa5.44□□□□□ -1.54
VAPB-206ENST00000520497 KRTAP10-2P60368 255 aa5.44□□□□□ -1.54
VAPB-206ENST00000520497 C6orf99Q4VX62 202 aa5.44□□□□□ -1.54
VAPB-206ENST00000520497 DNAH5Q8TE73 4624 aa5.44□□□□□ -1.54
VAPB-206ENST00000520497 DYNC1H1Q14204 4646 aaKnown RBP5.43□□□□□ -1.54
VAPB-206ENST00000520497 IGLV5-52A0A0A0MRZ9 124 aa5.43□□□□□ -1.54
VAPB-206ENST00000520497 A0A1B0GVY2 172 aa5.43□□□□□ -1.54
VAPB-206ENST00000520497 K7ERU9 68 aa5.43□□□□□ -1.54
VAPB-206ENST00000520497 PRYO14603 147 aa5.43□□□□□ -1.54
VAPB-206ENST00000520497 ZNF73O43830 326 aaPredicted RBP5.43□□□□□ -1.54
VAPB-206ENST00000520497 FUSP35637 526 aaKnown RBP eCLIP5.43□□□□□ -1.54
VAPB-206ENST00000520497 ANKRD29Q8N6D5 301 aa5.43□□□□□ -1.54
VAPB-206ENST00000520497 IGKV2-24A0A0C4DH68 120 aa5.42□□□□□ -1.54
VAPB-206ENST00000520497 COX7BP24311 80 aa5.42□□□□□ -1.54
VAPB-206ENST00000520497 SERTAD4-AS1Q5TG53 156 aa5.42□□□□□ -1.54
VAPB-206ENST00000520497 FAM19A5Q7Z5A7 132 aaPredicted RBP5.42□□□□□ -1.54
VAPB-206ENST00000520497 MRPL55Q7Z7F7 128 aaKnown RBP5.42□□□□□ -1.54
VAPB-206ENST00000520497 TEN1Q86WV5 123 aa5.42□□□□□ -1.54
VAPB-206ENST00000520497 KRTAP7-1Q8IUC3 87 aa5.42□□□□□ -1.54
VAPB-206ENST00000520497 PRO0461Q9UI25 63 aa5.42□□□□□ -1.54
VAPB-206ENST00000520497 FAM168BA1KXE4 195 aa5.41□□□□□ -1.54
VAPB-206ENST00000520497 PANO1I0J062 215 aa5.41□□□□□ -1.54
VAPB-206ENST00000520497 CHTF8P0CG12 524 aa5.41□□□□□ -1.54
VAPB-206ENST00000520497 MTURNQ8N3F0 131 aa5.41□□□□□ -1.54
VAPB-206ENST00000520497 SPACA4Q8TDM5 124 aa5.41□□□□□ -1.54
VAPB-206ENST00000520497 C7orf33Q8WU49 177 aa5.41□□□□□ -1.54
VAPB-206ENST00000520497 KRTAP4-5Q9BYR2 181 aa5.41□□□□□ -1.54
VAPB-206ENST00000520497 ORMDL1Q9P0S3 153 aa5.41□□□□□ -1.54
VAPB-206ENST00000520497 PKHD1P08F94 4074 aa5.4□□□□□ -1.54
VAPB-206ENST00000520497 ETDCA0A1B0GVM5 59 aa5.4□□□□□ -1.54
VAPB-206ENST00000520497 hADV29S1A0JD25 119 aa5.4□□□□□ -1.54
VAPB-206ENST00000520497 EPM2AB3EWF7 344 aa5.4□□□□□ -1.54
VAPB-206ENST00000520497 ETDBQ3ZM63 59 aa5.4□□□□□ -1.54
VAPB-206ENST00000520497 PPDPFLQ8WWR9 84 aa5.4□□□□□ -1.54
VAPB-206ENST00000520497 DPH3Q96FX2 82 aa5.4□□□□□ -1.54
VAPB-206ENST00000520497 LINC01600Q96MT4 127 aa5.4□□□□□ -1.54
VAPB-206ENST00000520497 KCNQ1DNQ9H478 68 aa5.4□□□□□ -1.54
VAPB-206ENST00000520497 C22orf24Q9Y442 160 aa5.4□□□□□ -1.54
VAPB-206ENST00000520497 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.4□□□□□ -1.54
VAPB-206ENST00000520497 A0A087WYN8 130 aa5.39□□□□□ -1.55
VAPB-206ENST00000520497 A0A1W2PNN7 141 aa5.39□□□□□ -1.55
VAPB-206ENST00000520497 BAALC-AS2P0C853 105 aa5.39□□□□□ -1.55
VAPB-206ENST00000520497 ELOF1P60002 83 aaKnown RBP5.39□□□□□ -1.55
VAPB-206ENST00000520497 OCIAD2Q56VL3 154 aa5.39□□□□□ -1.55
VAPB-206ENST00000520497 LINC00575Q6W349 94 aa5.39□□□□□ -1.55
VAPB-206ENST00000520497 FAM218AQ96MZ4 157 aa5.39□□□□□ -1.55
VAPB-206ENST00000520497 IGLV1-50A0A075B6I6 118 aa5.38□□□□□ -1.55
VAPB-206ENST00000520497 INAFM2P0DMQ5 153 aa5.38□□□□□ -1.55
VAPB-206ENST00000520497 UBE2BP63146 152 aa5.38□□□□□ -1.55
VAPB-206ENST00000520497 Q6ZSA8 131 aa5.38□□□□□ -1.55
VAPB-206ENST00000520497 LINC00167Q96N53 147 aa5.38□□□□□ -1.55
VAPB-206ENST00000520497 ABCA13Q86UQ4 5058 aa5.38□□□□□ -1.55
VAPB-206ENST00000520497 TMEM256-PLSCR3K7ERE1 68 aa5.37□□□□□ -1.55
VAPB-206ENST00000520497 REG3GQ6UW15 175 aa5.37□□□□□ -1.55
VAPB-206ENST00000520497 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.37□□□□□ -1.55
VAPB-206ENST00000520497 KRTAP4-9Q9BYQ8 210 aa5.37□□□□□ -1.55
VAPB-206ENST00000520497 DHRS4-AS1Q9P1J3 65 aa5.37□□□□□ -1.55
VAPB-206ENST00000520497 DNAH8Q96JB1 4490 aa5.37□□□□□ -1.55
VAPB-206ENST00000520497 RYR1P21817 5038 aa5.36□□□□□ -1.55
VAPB-206ENST00000520497 RPL37AP8A6NKH3 93 aa5.36□□□□□ -1.55
VAPB-206ENST00000520497 KRTAP10-1P60331 282 aa5.36□□□□□ -1.55
VAPB-206ENST00000520497 KRTAP4-2Q9BYR5 136 aa5.36□□□□□ -1.55
VAPB-206ENST00000520497 PLAC8Q9NZF1 115 aa5.36□□□□□ -1.55
VAPB-206ENST00000520497 JMJD7-PLA2G4BH0Y9G9 81 aa5.35□□□□□ -1.55
VAPB-206ENST00000520497 FAM30AQ9NZY2 134 aa5.35□□□□□ -1.55
VAPB-206ENST00000520497 SPRR1AP35321 89 aa5.34□□□□□ -1.55
VAPB-206ENST00000520497 C21orf62-AS1Q17RA5 79 aa5.34□□□□□ -1.55
VAPB-206ENST00000520497 Q6ZRX8 168 aa5.34□□□□□ -1.55
VAPB-206ENST00000520497 B5MCH6 92 aa5.33□□□□□ -1.56
VAPB-206ENST00000520497 Q6ZQY7 126 aa5.33□□□□□ -1.56
VAPB-206ENST00000520497 PHF5AQ7RTV0 110 aaKnown RBP5.33□□□□□ -1.56
VAPB-206ENST00000520497 HSPG2P98160 4391 aa5.32□□□□□ -1.56
VAPB-206ENST00000520497 KRTAP4-16G5E9R7 235 aaPredicted RBP5.32□□□□□ -1.56
VAPB-206ENST00000520497 KRTAP11-1Q8IUC1 163 aa5.32□□□□□ -1.56
VAPB-206ENST00000520497 LAMTOR3Q9UHA4 124 aa5.32□□□□□ -1.56
VAPB-206ENST00000520497 LRP1BQ9NZR2 4599 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms