RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 MRPS25P82663 173 aaKnown RBP-5.77□□□□□ -3.33
RNU6-539P-201ENST00000516665 SMIM21Q3B7S5 101 aa-5.77□□□□□ -3.33
RNU6-539P-201ENST00000516665 TRAPPC2P0DI81 140 aa-5.78□□□□□ -3.33
RNU6-539P-201ENST00000516665 TRAPPC2BP0DI82 140 aa-5.78□□□□□ -3.33
RNU6-539P-201ENST00000516665 WT1-ASQ06250 92 aa-5.78□□□□□ -3.33
RNU6-539P-201ENST00000516665 COMMD6Q7Z4G1 85 aa-5.78□□□□□ -3.33
RNU6-539P-201ENST00000516665 SPANXDQ9BXN6 97 aa-5.78□□□□□ -3.33
RNU6-539P-201ENST00000516665 HIGD1AQ9Y241 93 aa-5.78□□□□□ -3.33
RNU6-539P-201ENST00000516665 M0QZ58 72 aa-5.79□□□□□ -3.34
RNU6-539P-201ENST00000516665 RPL38P63173 70 aaKnown RBP-5.79□□□□□ -3.34
RNU6-539P-201ENST00000516665 GRIN2AQ12879 1464 aa-5.79□□□□□ -3.34
RNU6-539P-201ENST00000516665 PFDN1O60925 122 aa-5.8□□□□□ -3.34
RNU6-539P-201ENST00000516665 TMEM35BQ8NCS4 154 aa-5.8□□□□□ -3.34
RNU6-539P-201ENST00000516665 TCEAL4Q96EI5 215 aa-5.8□□□□□ -3.34
RNU6-539P-201ENST00000516665 CEP19Q96LK0 163 aa-5.8□□□□□ -3.34
RNU6-539P-201ENST00000516665 PHLPP1O60346 1717 aa-5.8□□□□□ -3.34
RNU6-539P-201ENST00000516665 EIF4G3O43432 1585 aaKnown RBP-5.8□□□□□ -3.34
RNU6-539P-201ENST00000516665 CPSF1Q10570 1443 aaKnown RBP-5.81□□□□□ -3.34
RNU6-539P-201ENST00000516665 IGLC6P0CF74 106 aa-5.81□□□□□ -3.34
RNU6-539P-201ENST00000516665 IGLC2P0DOY2 106 aa-5.81□□□□□ -3.34
RNU6-539P-201ENST00000516665 IGLC3P0DOY3 106 aa-5.81□□□□□ -3.34
RNU6-539P-201ENST00000516665 C12orf73Q69YU5 71 aa-5.81□□□□□ -3.34
RNU6-539P-201ENST00000516665 LEAP2Q969E1 77 aa-5.82□□□□□ -3.34
RNU6-539P-201ENST00000516665 LSM10Q969L4 123 aaKnown RBP-5.82□□□□□ -3.34
RNU6-539P-201ENST00000516665 SYNMO15061 1565 aa-5.82□□□□□ -3.34
RNU6-539P-201ENST00000516665 TMEM131LA2VDJ0 1609 aa-5.82□□□□□ -3.34
RNU6-539P-201ENST00000516665 NESP48681 1621 aa-5.82□□□□□ -3.34
RNU6-539P-201ENST00000516665 A0A1B0GUL6 1792 aa-5.83□□□□□ -3.34
RNU6-539P-201ENST00000516665 LLPHQ9BRT6 129 aaKnown RBP-5.83□□□□□ -3.34
RNU6-539P-201ENST00000516665 MANBALQ9NQG1 85 aa-5.83□□□□□ -3.34
RNU6-539P-201ENST00000516665 FAM135AQ9P2D6 1515 aa-5.84□□□□□ -3.34
RNU6-539P-201ENST00000516665 TOP2BQ02880 1626 aa-5.84□□□□□ -3.34
RNU6-539P-201ENST00000516665 TRAV36DV7A0A075B6V5 113 aa-5.84□□□□□ -3.34
RNU6-539P-201ENST00000516665 TPM2P07951 284 aa-5.84□□□□□ -3.34
RNU6-539P-201ENST00000516665 COX6CP09669 75 aa-5.84□□□□□ -3.34
RNU6-539P-201ENST00000516665 DNMBPQ6XZF7 1577 aa-5.84□□□□□ -3.35
RNU6-539P-201ENST00000516665 POLR1AO95602 1720 aaPredicted RBP-5.85□□□□□ -3.35
RNU6-539P-201ENST00000516665 Q0VG73 95 aa-5.85□□□□□ -3.35
RNU6-539P-201ENST00000516665 DPH3Q96FX2 82 aa-5.85□□□□□ -3.35
RNU6-539P-201ENST00000516665 C12orf57Q99622 126 aa-5.85□□□□□ -3.35
RNU6-539P-201ENST00000516665 NOP10Q9NPE3 64 aaKnown RBP-5.85□□□□□ -3.35
RNU6-539P-201ENST00000516665 Q56UQ5 140 aa-5.86□□□□□ -3.35
RNU6-539P-201ENST00000516665 KCNRGQ8N5I3 272 aa-5.86□□□□□ -3.35
RNU6-539P-201ENST00000516665 LINC00694P0DN24 101 aa-5.87□□□□□ -3.35
RNU6-539P-201ENST00000516665 ITSN2Q9NZM3 1697 aa-5.88□□□□□ -3.35
RNU6-539P-201ENST00000516665 GUCA1AP43080 201 aaPredicted RBP-5.88□□□□□ -3.35
RNU6-539P-201ENST00000516665 ATP6V1G3Q96LB4 118 aa-5.88□□□□□ -3.35
RNU6-539P-201ENST00000516665 TPM3P06753 285 aa-5.89□□□□□ -3.35
RNU6-539P-201ENST00000516665 CTXN2P0C2S0 81 aa-5.89□□□□□ -3.35
RNU6-539P-201ENST00000516665 PPP1R14BQ96C90 147 aa-5.89□□□□□ -3.35
RNU6-539P-201ENST00000516665 PRO1854Q9UHT4 67 aa-5.89□□□□□ -3.35
RNU6-539P-201ENST00000516665 SUPT6HQ7KZ85 1726 aaKnown RBP-5.89□□□□□ -3.35
RNU6-539P-201ENST00000516665 PLCH1Q4KWH8 1693 aa-5.9□□□□□ -3.35
RNU6-539P-201ENST00000516665 VAMP8Q9BV40 100 aa-5.9□□□□□ -3.35
RNU6-539P-201ENST00000516665 BOLA2Q9H3K6 86 aa-5.9□□□□□ -3.35
RNU6-539P-201ENST00000516665 VCANP13611 3396 aa-5.9□□□□□ -3.35
RNU6-539P-201ENST00000516665 HOPXQ9BPY8 73 aaPredicted RBP-5.91□□□□□ -3.36
RNU6-539P-201ENST00000516665 SAMD13Q5VXD3 122 aa-5.92□□□□□ -3.36
RNU6-539P-201ENST00000516665 TOMM20LQ6UXN7 152 aa-5.92□□□□□ -3.36
RNU6-539P-201ENST00000516665 SERP1Q9Y6X1 66 aa-5.92□□□□□ -3.36
RNU6-539P-201ENST00000516665 F6UZH7 168 aa-5.93□□□□□ -3.36
RNU6-539P-201ENST00000516665 M0QY20 66 aa-5.93□□□□□ -3.36
RNU6-539P-201ENST00000516665 TPM4P67936 248 aa-5.93□□□□□ -3.36
RNU6-539P-201ENST00000516665 USP34Q70CQ2 3546 aa-5.94□□□□□ -3.36
RNU6-539P-201ENST00000516665 ACYP1P07311 99 aa-5.94□□□□□ -3.36
RNU6-539P-201ENST00000516665 S100PP25815 95 aa-5.94□□□□□ -3.36
RNU6-539P-201ENST00000516665 ROBO1Q9Y6N7 1651 aa-5.94□□□□□ -3.36
RNU6-539P-201ENST00000516665 LEPROTL1O95214 131 aa-5.95□□□□□ -3.36
RNU6-539P-201ENST00000516665 NWD1Q149M9 1564 aa-5.95□□□□□ -3.36
RNU6-539P-201ENST00000516665 PPP3R2Q96LZ3 170 aa-5.95□□□□□ -3.36
RNU6-539P-201ENST00000516665 AIF1LQ9BQI0 150 aa-5.95□□□□□ -3.36
RNU6-539P-201ENST00000516665 ASXL1Q8IXJ9 1541 aa-5.95□□□□□ -3.36
RNU6-539P-201ENST00000516665 OVOS2A0A0J9YW53 1432 aa-5.96□□□□□ -3.36
RNU6-539P-201ENST00000516665 OVOS2Q6IE36 1432 aa-5.96□□□□□ -3.36
RNU6-539P-201ENST00000516665 LCE6AA0A183 80 aa-5.96□□□□□ -3.36
RNU6-539P-201ENST00000516665 GNG11P61952 73 aa-5.96□□□□□ -3.36
RNU6-539P-201ENST00000516665 ROCK1Q13464 1354 aa-5.96□□□□□ -3.36
RNU6-539P-201ENST00000516665 KIF1AQ12756 1690 aa-5.97□□□□□ -3.36
RNU6-539P-201ENST00000516665 LRRC7Q96NW7 1537 aa-5.97□□□□□ -3.37
RNU6-539P-201ENST00000516665 TSPAN19P0C672 248 aa-5.97□□□□□ -3.37
RNU6-539P-201ENST00000516665 TFAMQ00059 246 aaKnown RBP-5.97□□□□□ -3.37
RNU6-539P-201ENST00000516665 RERGLQ9H628 205 aa-5.97□□□□□ -3.37
RNU6-539P-201ENST00000516665 ATPIF1Q9UII2 106 aa-5.97□□□□□ -3.37
RNU6-539P-201ENST00000516665 ERVK-7P63135 1459 aa-5.97□□□□□ -3.37
RNU6-539P-201ENST00000516665 DBIP07108 87 aaKnown RBP-5.98□□□□□ -3.37
RNU6-539P-201ENST00000516665 CFTRP13569 1480 aa-5.98□□□□□ -3.37
RNU6-539P-201ENST00000516665 RPS27P42677 84 aaKnown RBP-5.99□□□□□ -3.37
RNU6-539P-201ENST00000516665 RPS27LQ71UM5 84 aaKnown RBP-5.99□□□□□ -3.37
RNU6-539P-201ENST00000516665 RGPD1P0DJD0 1748 aa-5.99□□□□□ -3.37
RNU6-539P-201ENST00000516665 MORN2Q502X0 79 aa-6□□□□□ -3.37
RNU6-539P-201ENST00000516665 PIK3C2BO00750 1634 aa-6□□□□□ -3.37
RNU6-539P-201ENST00000516665 RGS21Q2M5E4 152 aa-6.01□□□□□ -3.37
RNU6-539P-201ENST00000516665 GAFA1Q96PS6 74 aa-6.01□□□□□ -3.37
RNU6-539P-201ENST00000516665 ANP32BQ92688 251 aaKnown RBP-6.02□□□□□ -3.37
RNU6-539P-201ENST00000516665 PDCD10Q9BUL8 212 aa-6.02□□□□□ -3.37
RNU6-539P-201ENST00000516665 MYH4Q9Y623 1939 aa-6.03□□□□□ -3.37
RNU6-539P-201ENST00000516665 TMEM262E9PQX1 116 aa-6.04□□□□□ -3.38
RNU6-539P-201ENST00000516665 UNC80Q8N2C7 3258 aa-6.04□□□□□ -3.38
RNU6-539P-201ENST00000516665 KIF21BO75037 1637 aa-6.05□□□□□ -3.38
RNU6-539P-201ENST00000516665 C8orf59Q8N0T1 100 aaPredicted RBP-6.05□□□□□ -3.38
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms