RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 GHRHP01286 108 aa10.13□□□□□ -0.79
NUP54-214ENST00000514307 LINC00575Q6W349 94 aa10.13□□□□□ -0.79
NUP54-214ENST00000514307 EPM2AB3EWF7 344 aa10.12□□□□□ -0.79
NUP54-214ENST00000514307 ETDCA0A1B0GVM5 59 aa10.11□□□□□ -0.79
NUP54-214ENST00000514307 hADV29S1A0JD25 119 aa10.11□□□□□ -0.79
NUP54-214ENST00000514307 H3BQ85 93 aa10.11□□□□□ -0.79
NUP54-214ENST00000514307 UBE2BP63146 152 aa10.11□□□□□ -0.79
NUP54-214ENST00000514307 REG3GQ6UW15 175 aa10.11□□□□□ -0.79
NUP54-214ENST00000514307 ELOF1P60002 83 aaKnown RBP10.1□□□□□ -0.79
NUP54-214ENST00000514307 FAM218AQ96MZ4 157 aa10.1□□□□□ -0.79
NUP54-214ENST00000514307 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.1□□□□□ -0.79
NUP54-214ENST00000514307 A0A087WYN8 130 aa10.09□□□□□ -0.79
NUP54-214ENST00000514307 BAALC-AS2P0C853 105 aa10.09□□□□□ -0.79
NUP54-214ENST00000514307 FUSP35637 526 aaKnown RBP eCLIP10.09□□□□□ -0.79
NUP54-214ENST00000514307 KRTAP10-2P60368 255 aa10.09□□□□□ -0.79
NUP54-214ENST00000514307 ANKRD29Q8N6D5 301 aa10.09□□□□□ -0.79
NUP54-214ENST00000514307 PLAC8Q9NZF1 115 aa10.09□□□□□ -0.79
NUP54-214ENST00000514307 DNAH6Q9C0G6 4158 aa10.08□□□□□ -0.8
NUP54-214ENST00000514307 H3BT86 120 aa10.08□□□□□ -0.8
NUP54-214ENST00000514307 SPRR1AP35321 89 aa10.08□□□□□ -0.8
NUP54-214ENST00000514307 PHF5AQ7RTV0 110 aaKnown RBP10.08□□□□□ -0.8
NUP54-214ENST00000514307 LINC01600Q96MT4 127 aa10.08□□□□□ -0.8
NUP54-214ENST00000514307 DHRS4-AS1Q9P1J3 65 aa10.08□□□□□ -0.8
NUP54-214ENST00000514307 PRO0461Q9UI25 63 aa10.08□□□□□ -0.8
NUP54-214ENST00000514307 EPPK1P58107 5090 aaKnown RBP10.07□□□□□ -0.8
NUP54-214ENST00000514307 PANO1I0J062 215 aa10.06□□□□□ -0.8
NUP54-214ENST00000514307 OCIAD2Q56VL3 154 aa10.06□□□□□ -0.8
NUP54-214ENST00000514307 LINC00528Q8N1L1 170 aa10.06□□□□□ -0.8
NUP54-214ENST00000514307 ORMDL1Q9P0S3 153 aa10.06□□□□□ -0.8
NUP54-214ENST00000514307 B5MCH6 92 aa10.05□□□□□ -0.8
NUP54-214ENST00000514307 TMEM256-PLSCR3K7ERE1 68 aa10.04□□□□□ -0.8
NUP54-214ENST00000514307 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.04□□□□□ -0.8
NUP54-214ENST00000514307 KRTAP4-16G5E9R7 235 aaPredicted RBP10.03□□□□□ -0.8
NUP54-214ENST00000514307 Q6ZRX8 168 aa10.03□□□□□ -0.8
NUP54-214ENST00000514307 DNAH10Q8IVF4 4471 aa10.03□□□□□ -0.8
NUP54-214ENST00000514307 SMCPP49901 116 aaPredicted RBP10.02□□□□□ -0.81
NUP54-214ENST00000514307 MTURNQ8N3F0 131 aa10.02□□□□□ -0.81
NUP54-214ENST00000514307 KMT2AQ03164 3969 aa10.01□□□□□ -0.81
NUP54-214ENST00000514307 H0Y9J4 135 aa10.01□□□□□ -0.81
NUP54-214ENST00000514307 FAM19A1Q7Z5A9 133 aa10.01□□□□□ -0.81
NUP54-214ENST00000514307 ETDBQ3ZM63 59 aa10□□□□□ -0.81
NUP54-214ENST00000514307 TEN1Q86WV5 123 aa10□□□□□ -0.81
NUP54-214ENST00000514307 BCE1O60756 84 aa9.99□□□□□ -0.81
NUP54-214ENST00000514307 KRTAP10-1P60331 282 aa9.99□□□□□ -0.81
NUP54-214ENST00000514307 UBE2AP49459 152 aa9.97□□□□□ -0.81
NUP54-214ENST00000514307 Q6ZQY7 126 aa9.97□□□□□ -0.81
NUP54-214ENST00000514307 Q6ZSA8 131 aa9.97□□□□□ -0.81
NUP54-214ENST00000514307 DNAH2Q9P225 4427 aa9.96□□□□□ -0.81
NUP54-214ENST00000514307 J3QR89 54 aa9.96□□□□□ -0.82
NUP54-214ENST00000514307 CIRBP-AS1Q8TBR5 109 aa9.96□□□□□ -0.82
NUP54-214ENST00000514307 PPDPFLQ8WWR9 84 aa9.96□□□□□ -0.82
NUP54-214ENST00000514307 FAM30AQ9NZY2 134 aa9.96□□□□□ -0.82
NUP54-214ENST00000514307 DNAH17Q9UFH2 4485 aa9.95□□□□□ -0.82
NUP54-214ENST00000514307 FRAS1Q86XX4 4008 aa9.95□□□□□ -0.82
NUP54-214ENST00000514307 A0A1B0GVY2 172 aa9.93□□□□□ -0.82
NUP54-214ENST00000514307 JMJD7-PLA2G4BH0Y9G9 81 aa9.93□□□□□ -0.82
NUP54-214ENST00000514307 KRTAP11-1Q8IUC1 163 aa9.93□□□□□ -0.82
NUP54-214ENST00000514307 SMCR5Q8TEV8 140 aa9.93□□□□□ -0.82
NUP54-214ENST00000514307 Q9BRP9 147 aa9.93□□□□□ -0.82
NUP54-214ENST00000514307 K7ERU9 68 aa9.91□□□□□ -0.82
NUP54-214ENST00000514307 LAMTOR3Q9UHA4 124 aa9.91□□□□□ -0.82
NUP54-214ENST00000514307 PSORS1C2Q9UIG4 136 aa9.91□□□□□ -0.82
NUP54-214ENST00000514307 PRLHP81277 87 aa9.9□□□□□ -0.82
NUP54-214ENST00000514307 SCXQ7RTU7 201 aa9.9□□□□□ -0.82
NUP54-214ENST00000514307 DEFB105AQ8NG35 78 aa9.9□□□□□ -0.82
NUP54-214ENST00000514307 HIGD2AQ9BW72 106 aa9.9□□□□□ -0.82
NUP54-214ENST00000514307 BIRC6Q9NR09 4857 aa9.9□□□□□ -0.83
NUP54-214ENST00000514307 C1orf137Q5JT78 98 aa9.89□□□□□ -0.83
NUP54-214ENST00000514307 TEX49A0A1B0GTD5 131 aa9.88□□□□□ -0.83
NUP54-214ENST00000514307 NDUFV3P56181 108 aaKnown RBP9.87□□□□□ -0.83
NUP54-214ENST00000514307 IGLV5-48A0A075B6I7 105 aa9.86□□□□□ -0.83
NUP54-214ENST00000514307 ERC2-IT1O76042 136 aa9.86□□□□□ -0.83
NUP54-214ENST00000514307 RBM3P98179 157 aaKnown RBP9.86□□□□□ -0.83
NUP54-214ENST00000514307 OBSCN-AS1Q96MR7 158 aa9.86□□□□□ -0.83
NUP54-214ENST00000514307 ZNF861PO60384 105 aa9.85□□□□□ -0.83
NUP54-214ENST00000514307 KRTAP13-1Q8IUC0 172 aa9.85□□□□□ -0.83
NUP54-214ENST00000514307 Q8N377 158 aa9.85□□□□□ -0.83
NUP54-214ENST00000514307 PDE6GP18545 87 aa9.84□□□□□ -0.83
NUP54-214ENST00000514307 C21orf62-AS1Q17RA5 79 aa9.84□□□□□ -0.83
NUP54-214ENST00000514307 ZNF706Q9Y5V0 76 aaPredicted RBP9.84□□□□□ -0.83
NUP54-214ENST00000514307 IGLV7-43P04211 117 aa9.83□□□□□ -0.84
NUP54-214ENST00000514307 ST20-AS1Q8NBB2 130 aa9.83□□□□□ -0.84
NUP54-214ENST00000514307 DSCR8Q96T75 97 aa9.83□□□□□ -0.84
NUP54-214ENST00000514307 LINC01547P58512 204 aaPredicted RBP9.81□□□□□ -0.84
NUP54-214ENST00000514307 HECTD4Q9Y4D8 3996 aa9.8□□□□□ -0.84
NUP54-214ENST00000514307 F8WEM9 126 aa9.79□□□□□ -0.84
NUP54-214ENST00000514307 ACYP1P07311 99 aa9.79□□□□□ -0.84
NUP54-214ENST00000514307 SPRR1BP22528 89 aa9.79□□□□□ -0.84
NUP54-214ENST00000514307 GAGE2AQ6NT46 116 aa9.78□□□□□ -0.84
NUP54-214ENST00000514307 C14orf132Q9NPU4 83 aa9.78□□□□□ -0.84
NUP54-214ENST00000514307 FAT2Q9NYQ8 4349 aa9.77□□□□□ -0.85
NUP54-214ENST00000514307 DNAH11Q96DT5 4516 aa9.76□□□□□ -0.85
NUP54-214ENST00000514307 LOC110117498A0A087WWA1 95 aa9.76□□□□□ -0.85
NUP54-214ENST00000514307 CCKP06307 115 aa9.76□□□□□ -0.85
NUP54-214ENST00000514307 XGP55808 180 aa9.75□□□□□ -0.85
NUP54-214ENST00000514307 HAMPP81172 84 aa9.75□□□□□ -0.85
NUP54-214ENST00000514307 A0A1B0GV72 72 aa9.74□□□□□ -0.85
NUP54-214ENST00000514307 SPRR4Q96PI1 79 aa9.74□□□□□ -0.85
NUP54-214ENST00000514307 FAM240AA0A1B0GVK7 77 aa9.73□□□□□ -0.85
NUP54-214ENST00000514307 SMIM29Q86T20 159 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms