RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 SPAG11AQ6PDA7 123 aa6.57□□□□□ -1.36
RNF4-216ENST00000511859 LOC105371267A0A1B0GV96 52 aa6.57□□□□□ -1.36
RNF4-216ENST00000511859 KRTAP9-7A8MTY7 169 aa6.57□□□□□ -1.36
RNF4-216ENST00000511859 NPC2P61916 151 aa6.57□□□□□ -1.36
RNF4-216ENST00000511859 MIR7-3HGQ8N6C7 128 aa6.57□□□□□ -1.36
RNF4-216ENST00000511859 SND1-IT1Q9HBX3 110 aa6.57□□□□□ -1.36
RNF4-216ENST00000511859 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.56□□□□□ -1.36
RNF4-216ENST00000511859 UBE2AP49459 152 aa6.56□□□□□ -1.36
RNF4-216ENST00000511859 COX17Q14061 63 aa6.56□□□□□ -1.36
RNF4-216ENST00000511859 C21orf62-AS1Q17RA5 79 aa6.56□□□□□ -1.36
RNF4-216ENST00000511859 SCGB1D4Q6XE38 83 aa6.56□□□□□ -1.36
RNF4-216ENST00000511859 KRTAP13-1Q8IUC0 172 aa6.56□□□□□ -1.36
RNF4-216ENST00000511859 ADAMTSL4-AS1Q5T5F5 129 aa6.55□□□□□ -1.36
RNF4-216ENST00000511859 C14orf144Q96I85 54 aa6.55□□□□□ -1.36
RNF4-216ENST00000511859 LINC00167Q96N53 147 aa6.55□□□□□ -1.36
RNF4-216ENST00000511859 RPL37AP8A6NKH3 93 aa6.54□□□□□ -1.36
RNF4-216ENST00000511859 LINC00587B1AMM8 73 aa6.53□□□□□ -1.36
RNF4-216ENST00000511859 Q8NDZ9 215 aa6.53□□□□□ -1.36
RNF4-216ENST00000511859 LITAFQ99732 161 aa6.53□□□□□ -1.36
RNF4-216ENST00000511859 EIF4EBP3O60516 100 aaPredicted RBP6.52□□□□□ -1.37
RNF4-216ENST00000511859 COX8AP10176 69 aa6.52□□□□□ -1.37
RNF4-216ENST00000511859 MT1HP80294 61 aa6.52□□□□□ -1.37
RNF4-216ENST00000511859 SOSTDC1Q6X4U4 206 aa6.51□□□□□ -1.37
RNF4-216ENST00000511859 BOD1L2Q8IYS8 172 aa6.51□□□□□ -1.37
RNF4-216ENST00000511859 GAGE10A6NGK3 116 aa6.5□□□□□ -1.37
RNF4-216ENST00000511859 TMEM238C9JI98 176 aa6.5□□□□□ -1.37
RNF4-216ENST00000511859 NCR3O14931 201 aa6.5□□□□□ -1.37
RNF4-216ENST00000511859 TIMM17BO60830 172 aa6.5□□□□□ -1.37
RNF4-216ENST00000511859 S100A12P80511 92 aa6.5□□□□□ -1.37
RNF4-216ENST00000511859 NKAPP1Q8N9T2 125 aa6.5□□□□□ -1.37
RNF4-216ENST00000511859 MIEN1Q9BRT3 115 aa6.5□□□□□ -1.37
RNF4-216ENST00000511859 TMEM238LA0A1B0GVL6 79 aa6.49□□□□□ -1.37
RNF4-216ENST00000511859 VPREB1P12018 145 aa6.49□□□□□ -1.37
RNF4-216ENST00000511859 SLC25A34Q6PIV7 304 aa6.49□□□□□ -1.37
RNF4-216ENST00000511859 C3orf22Q8N5N4 141 aa6.49□□□□□ -1.37
RNF4-216ENST00000511859 LINC00308Q8TCZ7 52 aa6.49□□□□□ -1.37
RNF4-216ENST00000511859 SMIM6P0DI80 62 aa6.48□□□□□ -1.37
RNF4-216ENST00000511859 SPANXDQ9BXN6 97 aa6.48□□□□□ -1.37
RNF4-216ENST00000511859 PRO1933Q9H354 126 aa6.48□□□□□ -1.37
RNF4-216ENST00000511859 SPANXCQ9NY87 97 aa6.48□□□□□ -1.37
RNF4-216ENST00000511859 IGLV5-37A0A075B6J1 123 aa6.47□□□□□ -1.37
RNF4-216ENST00000511859 KRTAP10-6P60371 365 aaPredicted RBP6.47□□□□□ -1.37
RNF4-216ENST00000511859 RPL24P83731 157 aaKnown RBP6.47□□□□□ -1.37
RNF4-216ENST00000511859 KRTAP19-2Q3LHN2 52 aa6.47□□□□□ -1.37
RNF4-216ENST00000511859 DLEU1O43261 78 aa6.46□□□□□ -1.37
RNF4-216ENST00000511859 MUSTN1Q8IVN3 82 aa6.46□□□□□ -1.37
RNF4-216ENST00000511859 IGKV2-28A0A075B6P5 120 aa6.45□□□□□ -1.38
RNF4-216ENST00000511859 LOC107984156A0A0G2JMH3 177 aa6.45□□□□□ -1.38
RNF4-216ENST00000511859 IGKV2D-28P01615 120 aa6.45□□□□□ -1.38
RNF4-216ENST00000511859 C2orf91Q6ZV80 131 aa6.45□□□□□ -1.38
RNF4-216ENST00000511859 ARL17AQ8IVW1 177 aa6.45□□□□□ -1.38
RNF4-216ENST00000511859 HIST1H4GQ99525 98 aa6.45□□□□□ -1.38
RNF4-216ENST00000511859 C12orf57Q99622 126 aa6.45□□□□□ -1.38
RNF4-216ENST00000511859 SPINK1P00995 79 aa6.44□□□□□ -1.38
RNF4-216ENST00000511859 PRLHP81277 87 aa6.44□□□□□ -1.38
RNF4-216ENST00000511859 SPANXB1Q9NS25 103 aaPredicted RBP6.44□□□□□ -1.38
RNF4-216ENST00000511859 M0R378 163 aa6.44□□□□□ -1.38
RNF4-216ENST00000511859 FAM19A1Q7Z5A9 133 aa6.44□□□□□ -1.38
RNF4-216ENST00000511859 IFITM1P13164 125 aa6.43□□□□□ -1.38
RNF4-216ENST00000511859 Q6ZVH6 145 aa6.43□□□□□ -1.38
RNF4-216ENST00000511859 HIGD1BQ9P298 99 aa6.43□□□□□ -1.38
RNF4-216ENST00000511859 UQCR10Q9UDW1 63 aa6.43□□□□□ -1.38
RNF4-216ENST00000511859 NDUFC2O95298 119 aa6.42□□□□□ -1.38
RNF4-216ENST00000511859 OR13C6PQ8NH95 151 aa6.42□□□□□ -1.38
RNF4-216ENST00000511859 COPS9Q8WXC6 57 aa6.42□□□□□ -1.38
RNF4-216ENST00000511859 TMEM126AQ9H061 195 aa6.42□□□□□ -1.38
RNF4-216ENST00000511859 TRBV10-3A0A0K0K1G6 114 aa6.41□□□□□ -1.38
RNF4-216ENST00000511859 S100A7L2Q5SY68 101 aa6.41□□□□□ -1.38
RNF4-216ENST00000511859 A4D1N5 150 aa6.4□□□□□ -1.39
RNF4-216ENST00000511859 DDTP30046 118 aa6.4□□□□□ -1.39
RNF4-216ENST00000511859 LINC00518Q8N0U6 118 aa6.4□□□□□ -1.39
RNF4-216ENST00000511859 Q8NBF4 154 aa6.4□□□□□ -1.39
RNF4-216ENST00000511859 TRBV10-2A0A0K0K1G8 114 aa6.39□□□□□ -1.39
RNF4-216ENST00000511859 M0R2T5 61 aa6.39□□□□□ -1.39
RNF4-216ENST00000511859 SVIPQ8NHG7 77 aa6.39□□□□□ -1.39
RNF4-216ENST00000511859 SPRR4Q96PI1 79 aa6.39□□□□□ -1.39
RNF4-216ENST00000511859 FLGP20930 4061 aaPredicted RBP6.39□□□□□ -1.39
RNF4-216ENST00000511859 RPS29P62273 56 aaKnown RBP6.38□□□□□ -1.39
RNF4-216ENST00000511859 A6NDN8 102 aa6.37□□□□□ -1.39
RNF4-216ENST00000511859 IGLV6-57P01721 117 aa6.37□□□□□ -1.39
RNF4-216ENST00000511859 TAL2Q16559 108 aa6.37□□□□□ -1.39
RNF4-216ENST00000511859 CEND1Q8N111 149 aa6.37□□□□□ -1.39
RNF4-216ENST00000511859 HIGD2AQ9BW72 106 aa6.37□□□□□ -1.39
RNF4-216ENST00000511859 ZNF706Q9Y5V0 76 aaPredicted RBP6.37□□□□□ -1.39
RNF4-216ENST00000511859 TSTD3H0UI37 97 aa6.36□□□□□ -1.39
RNF4-216ENST00000511859 PRYO14603 147 aa6.36□□□□□ -1.39
RNF4-216ENST00000511859 FXYD2P54710 66 aa6.36□□□□□ -1.39
RNF4-216ENST00000511859 HSD52Q0P140 79 aa6.36□□□□□ -1.39
RNF4-216ENST00000511859 IGLV8-61A0A075B6I0 122 aa6.35□□□□□ -1.39
RNF4-216ENST00000511859 TRAV23DV6A0A075B6W5 121 aa6.35□□□□□ -1.39
RNF4-216ENST00000511859 SLC25A20O43772 301 aa6.35□□□□□ -1.39
RNF4-216ENST00000511859 Q8N377 158 aa6.35□□□□□ -1.39
RNF4-216ENST00000511859 KCNQ1DNQ9H478 68 aa6.35□□□□□ -1.39
RNF4-216ENST00000511859 CFC1P0CG37 223 aa6.34□□□□□ -1.39
RNF4-216ENST00000511859 TRAV13-2A0A0B4J235 113 aa6.33□□□□□ -1.4
RNF4-216ENST00000511859 ETDCA0A1B0GVM5 59 aa6.33□□□□□ -1.4
RNF4-216ENST00000511859 H7C2G1 150 aa6.33□□□□□ -1.4
RNF4-216ENST00000511859 PCOTHQ58A44 107 aa6.33□□□□□ -1.4
RNF4-216ENST00000511859 LCE3BQ5TA77 95 aa6.33□□□□□ -1.4
RNF4-216ENST00000511859 RAB37Q96AX2 223 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms