RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 ADAMTSL4-AS1Q5T5F5 129 aa4.3□□□□□ -1.72
TOPBP1-207ENST00000509162 ATOH7Q8N100 152 aa4.3□□□□□ -1.72
TOPBP1-207ENST00000509162 HIST1H2BLQ99880 126 aa4.3□□□□□ -1.72
TOPBP1-207ENST00000509162 MAP1LC3CQ9BXW4 147 aa4.3□□□□□ -1.72
TOPBP1-207ENST00000509162 IGLV1-50A0A075B6I6 118 aa4.29□□□□□ -1.72
TOPBP1-207ENST00000509162 BCE1O60756 84 aa4.29□□□□□ -1.72
TOPBP1-207ENST00000509162 KRTDAPP60985 99 aa4.29□□□□□ -1.72
TOPBP1-207ENST00000509162 COX17Q14061 63 aa4.29□□□□□ -1.72
TOPBP1-207ENST00000509162 TMEM126AQ9H061 195 aa4.29□□□□□ -1.72
TOPBP1-207ENST00000509162 A0A087X002 238 aa4.28□□□□□ -1.72
TOPBP1-207ENST00000509162 LOC107984156A0A0G2JMH3 177 aa4.28□□□□□ -1.72
TOPBP1-207ENST00000509162 KRTAP4-16G5E9R7 235 aaPredicted RBP4.28□□□□□ -1.72
TOPBP1-207ENST00000509162 LINC00158P58513 81 aa4.28□□□□□ -1.72
TOPBP1-207ENST00000509162 HERV-K104P63124 156 aa4.28□□□□□ -1.72
TOPBP1-207ENST00000509162 PRLHP81277 87 aa4.28□□□□□ -1.72
TOPBP1-207ENST00000509162 MEIG1Q5JSS6 88 aa4.28□□□□□ -1.72
TOPBP1-207ENST00000509162 SFTA2Q6UW10 78 aa4.28□□□□□ -1.72
TOPBP1-207ENST00000509162 ARL17AQ8IVW1 177 aa4.28□□□□□ -1.72
TOPBP1-207ENST00000509162 MYMXA0A1B0GTQ4 84 aa4.27□□□□□ -1.73
TOPBP1-207ENST00000509162 ZNF861PO60384 105 aa4.27□□□□□ -1.73
TOPBP1-207ENST00000509162 SPRR1AP35321 89 aa4.27□□□□□ -1.73
TOPBP1-207ENST00000509162 NPC2P61916 151 aa4.27□□□□□ -1.73
TOPBP1-207ENST00000509162 BOD1L2Q8IYS8 172 aa4.27□□□□□ -1.73
TOPBP1-207ENST00000509162 NKAPP1Q8N9T2 125 aa4.27□□□□□ -1.73
TOPBP1-207ENST00000509162 ANAPC11Q9NYG5 84 aa4.27□□□□□ -1.73
TOPBP1-207ENST00000509162 TRBV10-3A0A0K0K1G6 114 aa4.26□□□□□ -1.73
TOPBP1-207ENST00000509162 LGALS3P17931 250 aaKnown RBP4.26□□□□□ -1.73
TOPBP1-207ENST00000509162 HERVK_113P61574 105 aa4.26□□□□□ -1.73
TOPBP1-207ENST00000509162 RPL24P83731 157 aaKnown RBP4.26□□□□□ -1.73
TOPBP1-207ENST00000509162 KRTAP13-2Q52LG2 175 aa4.26□□□□□ -1.73
TOPBP1-207ENST00000509162 PCP2Q8IVA1 136 aa4.26□□□□□ -1.73
TOPBP1-207ENST00000509162 DIRC1Q969H9 104 aa4.26□□□□□ -1.73
TOPBP1-207ENST00000509162 NMUP48645 174 aa4.25□□□□□ -1.73
TOPBP1-207ENST00000509162 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.25□□□□□ -1.73
TOPBP1-207ENST00000509162 REG3GQ6UW15 175 aa4.25□□□□□ -1.73
TOPBP1-207ENST00000509162 ZNF815PA8K554 130 aa4.24□□□□□ -1.73
TOPBP1-207ENST00000509162 SMCR5Q8TEV8 140 aa4.24□□□□□ -1.73
TOPBP1-207ENST00000509162 KCNQ1DNQ9H478 68 aa4.24□□□□□ -1.73
TOPBP1-207ENST00000509162 ERC2-IT1O76042 136 aa4.23□□□□□ -1.73
TOPBP1-207ENST00000509162 IGLV6-57P01721 117 aa4.23□□□□□ -1.73
TOPBP1-207ENST00000509162 LINC00308Q8TCZ7 52 aa4.23□□□□□ -1.73
TOPBP1-207ENST00000509162 TIMM17BO60830 172 aa4.22□□□□□ -1.73
TOPBP1-207ENST00000509162 FAM19A1Q7Z5A9 133 aa4.22□□□□□ -1.73
TOPBP1-207ENST00000509162 LINC00337Q8N6G1 96 aa4.22□□□□□ -1.73
TOPBP1-207ENST00000509162 Q9BRP9 147 aa4.22□□□□□ -1.73
TOPBP1-207ENST00000509162 SPANXB1Q9NS25 103 aaPredicted RBP4.22□□□□□ -1.73
TOPBP1-207ENST00000509162 TRBV10-2A0A0K0K1G8 114 aa4.21□□□□□ -1.74
TOPBP1-207ENST00000509162 NDUFC2O95298 119 aa4.21□□□□□ -1.74
TOPBP1-207ENST00000509162 RPL28P46779 137 aaKnown RBP4.21□□□□□ -1.74
TOPBP1-207ENST00000509162 UBE2AP49459 152 aa4.21□□□□□ -1.74
TOPBP1-207ENST00000509162 C3orf22Q8N5N4 141 aa4.21□□□□□ -1.74
TOPBP1-207ENST00000509162 SPANXDQ9BXN6 97 aa4.21□□□□□ -1.74
TOPBP1-207ENST00000509162 SPANXCQ9NY87 97 aa4.21□□□□□ -1.74
TOPBP1-207ENST00000509162 C20orf202A1L168 122 aa4.2□□□□□ -1.74
TOPBP1-207ENST00000509162 DDTP30046 118 aa4.2□□□□□ -1.74
TOPBP1-207ENST00000509162 SPRR4Q96PI1 79 aa4.2□□□□□ -1.74
TOPBP1-207ENST00000509162 HIGD2AQ9BW72 106 aa4.19□□□□□ -1.74
TOPBP1-207ENST00000509162 MUC2Q02817 5179 aa4.19□□□□□ -1.74
TOPBP1-207ENST00000509162 TRAV23DV6A0A075B6W5 121 aa4.18□□□□□ -1.74
TOPBP1-207ENST00000509162 LINC00587B1AMM8 73 aa4.18□□□□□ -1.74
TOPBP1-207ENST00000509162 S100A2P29034 98 aa4.18□□□□□ -1.74
TOPBP1-207ENST00000509162 Q6ZRX8 168 aa4.18□□□□□ -1.74
TOPBP1-207ENST00000509162 FAT4Q6V0I7 4981 aa4.18□□□□□ -1.74
TOPBP1-207ENST00000509162 S100A6P06703 90 aa4.17□□□□□ -1.74
TOPBP1-207ENST00000509162 LINC00483Q53H64 154 aa4.17□□□□□ -1.74
TOPBP1-207ENST00000509162 ZNF73O43830 326 aaPredicted RBP4.16□□□□□ -1.74
TOPBP1-207ENST00000509162 FAM229BQ4G0N7 80 aa4.16□□□□□ -1.74
TOPBP1-207ENST00000509162 PYY3Q5JQD4 70 aa4.16□□□□□ -1.74
TOPBP1-207ENST00000509162 C2orf91Q6ZV80 131 aa4.16□□□□□ -1.74
TOPBP1-207ENST00000509162 MUSTN1Q8IVN3 82 aa4.16□□□□□ -1.74
TOPBP1-207ENST00000509162 ST20-AS1Q8NBB2 130 aa4.16□□□□□ -1.74
TOPBP1-207ENST00000509162 MIEN1Q9BRT3 115 aa4.16□□□□□ -1.74
TOPBP1-207ENST00000509162 PPDPFQ9H3Y8 114 aa4.16□□□□□ -1.74
TOPBP1-207ENST00000509162 ETDCA0A1B0GVM5 59 aa4.15□□□□□ -1.75
TOPBP1-207ENST00000509162 SCGB1D4Q6XE38 83 aa4.15□□□□□ -1.75
TOPBP1-207ENST00000509162 COX8AP10176 69 aa4.14□□□□□ -1.75
TOPBP1-207ENST00000509162 CRYGAP11844 174 aa4.14□□□□□ -1.75
TOPBP1-207ENST00000509162 RPL13AP40429 203 aaKnown RBP4.14□□□□□ -1.75
TOPBP1-207ENST00000509162 LINC01547P58512 204 aaPredicted RBP4.14□□□□□ -1.75
TOPBP1-207ENST00000509162 JOSD1Q15040 202 aaPredicted RBP4.14□□□□□ -1.75
TOPBP1-207ENST00000509162 TYMSOSQ8TAI1 123 aa4.14□□□□□ -1.75
TOPBP1-207ENST00000509162 IGLV9-49A0A0B4J1Y8 123 aa4.13□□□□□ -1.75
TOPBP1-207ENST00000509162 ELOF1P60002 83 aaKnown RBP4.13□□□□□ -1.75
TOPBP1-207ENST00000509162 C6orf99Q4VX62 202 aa4.13□□□□□ -1.75
TOPBP1-207ENST00000509162 S100A7L2Q5SY68 101 aa4.13□□□□□ -1.75
TOPBP1-207ENST00000509162 RETNLBQ9BQ08 111 aa4.13□□□□□ -1.75
TOPBP1-207ENST00000509162 TSPAN13O95857 204 aa4.12□□□□□ -1.75
TOPBP1-207ENST00000509162 IFITM1P13164 125 aa4.12□□□□□ -1.75
TOPBP1-207ENST00000509162 SPATA45Q537H7 98 aa4.12□□□□□ -1.75
TOPBP1-207ENST00000509162 LINC00304Q8N9R0 145 aa4.12□□□□□ -1.75
TOPBP1-207ENST00000509162 C12orf57Q99622 126 aa4.12□□□□□ -1.75
TOPBP1-207ENST00000509162 Q6ZVH6 145 aa4.11□□□□□ -1.75
TOPBP1-207ENST00000509162 Q8NBF4 154 aa4.11□□□□□ -1.75
TOPBP1-207ENST00000509162 OR13C6PQ8NH95 151 aa4.11□□□□□ -1.75
TOPBP1-207ENST00000509162 SMIM11BQ8TCY0 68 aa4.11□□□□□ -1.75
TOPBP1-207ENST00000509162 C14orf144Q96I85 54 aa4.11□□□□□ -1.75
TOPBP1-207ENST00000509162 DLEU1O43261 78 aa4.1□□□□□ -1.75
TOPBP1-207ENST00000509162 SPRR1BP22528 89 aa4.1□□□□□ -1.75
TOPBP1-207ENST00000509162 AKR1D1P51857 326 aa4.1□□□□□ -1.75
TOPBP1-207ENST00000509162 MOBPQ13875 183 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms