RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 LINC00518Q8N0U6 118 aa6.36□□□□□ -1.39
POLR2J3-213ENST00000508848 SPANXDQ9BXN6 97 aa6.36□□□□□ -1.39
POLR2J3-213ENST00000508848 SPANXCQ9NY87 97 aa6.36□□□□□ -1.39
POLR2J3-213ENST00000508848 IGLV6-57P01721 117 aa6.35□□□□□ -1.39
POLR2J3-213ENST00000508848 UBE2AP49459 152 aa6.35□□□□□ -1.39
POLR2J3-213ENST00000508848 CTAG1AP78358 180 aa6.35□□□□□ -1.39
POLR2J3-213ENST00000508848 ANKRD39Q53RE8 183 aa6.35□□□□□ -1.39
POLR2J3-213ENST00000508848 LINC00308Q8TCZ7 52 aa6.35□□□□□ -1.39
POLR2J3-213ENST00000508848 HSBP1L1C9JCN9 74 aa6.34□□□□□ -1.39
POLR2J3-213ENST00000508848 TMEM238C9JI98 176 aa6.34□□□□□ -1.39
POLR2J3-213ENST00000508848 FAM229BQ4G0N7 80 aa6.34□□□□□ -1.39
POLR2J3-213ENST00000508848 SOSTDC1Q6X4U4 206 aa6.34□□□□□ -1.39
POLR2J3-213ENST00000508848 DAND5Q8N907 189 aa6.34□□□□□ -1.39
POLR2J3-213ENST00000508848 KRTAP4-2Q9BYR5 136 aa6.34□□□□□ -1.39
POLR2J3-213ENST00000508848 TNXBP22105 4242 aa6.34□□□□□ -1.39
POLR2J3-213ENST00000508848 TRBV10-3A0A0K0K1G6 114 aa6.33□□□□□ -1.4
POLR2J3-213ENST00000508848 DDTP30046 118 aa6.33□□□□□ -1.4
POLR2J3-213ENST00000508848 EIF4EBP3O60516 100 aaPredicted RBP6.32□□□□□ -1.4
POLR2J3-213ENST00000508848 SCGB1D4Q6XE38 83 aa6.32□□□□□ -1.4
POLR2J3-213ENST00000508848 FAM19A1Q7Z5A9 133 aa6.32□□□□□ -1.4
POLR2J3-213ENST00000508848 NCR3O14931 201 aa6.31□□□□□ -1.4
POLR2J3-213ENST00000508848 S100A7L2Q5SY68 101 aa6.31□□□□□ -1.4
POLR2J3-213ENST00000508848 ATOH7Q8N100 152 aa6.31□□□□□ -1.4
POLR2J3-213ENST00000508848 TTTY13Q9BZ97 58 aa6.31□□□□□ -1.4
POLR2J3-213ENST00000508848 LOC105371267A0A1B0GV96 52 aa6.3□□□□□ -1.4
POLR2J3-213ENST00000508848 ETDCA0A1B0GVM5 59 aa6.3□□□□□ -1.4
POLR2J3-213ENST00000508848 A6NJY4 79 aa6.3□□□□□ -1.4
POLR2J3-213ENST00000508848 DLEU1O43261 78 aa6.3□□□□□ -1.4
POLR2J3-213ENST00000508848 CRYGAP11844 174 aa6.3□□□□□ -1.4
POLR2J3-213ENST00000508848 PCP2Q8IVA1 136 aa6.3□□□□□ -1.4
POLR2J3-213ENST00000508848 PRR26Q8N8Z3 221 aa6.3□□□□□ -1.4
POLR2J3-213ENST00000508848 B5MCH6 92 aa6.29□□□□□ -1.4
POLR2J3-213ENST00000508848 SCGB1D1O95968 90 aa6.29□□□□□ -1.4
POLR2J3-213ENST00000508848 JOSD1Q15040 202 aaPredicted RBP6.29□□□□□ -1.4
POLR2J3-213ENST00000508848 ZNF706Q9Y5V0 76 aaPredicted RBP6.29□□□□□ -1.4
POLR2J3-213ENST00000508848 TRBV7-6A0A0J9YX20 115 aa6.28□□□□□ -1.4
POLR2J3-213ENST00000508848 HINT1P49773 126 aaPredicted RBP6.28□□□□□ -1.4
POLR2J3-213ENST00000508848 PRLHP81277 87 aa6.28□□□□□ -1.4
POLR2J3-213ENST00000508848 Q6ZRX8 168 aa6.28□□□□□ -1.4
POLR2J3-213ENST00000508848 TRAV23DV6A0A075B6W5 121 aa6.27□□□□□ -1.41
POLR2J3-213ENST00000508848 ZNF73O43830 326 aaPredicted RBP6.27□□□□□ -1.41
POLR2J3-213ENST00000508848 COX8AP10176 69 aa6.26□□□□□ -1.41
POLR2J3-213ENST00000508848 SMCR5Q8TEV8 140 aa6.26□□□□□ -1.41
POLR2J3-213ENST00000508848 SPRR4Q96PI1 79 aa6.26□□□□□ -1.41
POLR2J3-213ENST00000508848 A0A087X002 238 aa6.25□□□□□ -1.41
POLR2J3-213ENST00000508848 NPC2P61916 151 aa6.25□□□□□ -1.41
POLR2J3-213ENST00000508848 LINC00483Q53H64 154 aa6.25□□□□□ -1.41
POLR2J3-213ENST00000508848 MUSTN1Q8IVN3 82 aa6.25□□□□□ -1.41
POLR2J3-213ENST00000508848 HIGD2AQ9BW72 106 aa6.25□□□□□ -1.41
POLR2J3-213ENST00000508848 TRAV13-2A0A0B4J235 113 aa6.24□□□□□ -1.41
POLR2J3-213ENST00000508848 TYMSOSQ8TAI1 123 aa6.24□□□□□ -1.41
POLR2J3-213ENST00000508848 A4D1N5 150 aa6.23□□□□□ -1.41
POLR2J3-213ENST00000508848 KRTAP13-2Q52LG2 175 aa6.23□□□□□ -1.41
POLR2J3-213ENST00000508848 OR13C6PQ8NH95 151 aa6.23□□□□□ -1.41
POLR2J3-213ENST00000508848 Q9BRP9 147 aa6.23□□□□□ -1.41
POLR2J3-213ENST00000508848 DHRS4-AS1Q9P1J3 65 aa6.23□□□□□ -1.41
POLR2J3-213ENST00000508848 HIGD1BQ9P298 99 aa6.23□□□□□ -1.41
POLR2J3-213ENST00000508848 HMCN2Q8NDA2 5059 aa6.22□□□□□ -1.41
POLR2J3-213ENST00000508848 SMIM6P0DI80 62 aa6.21□□□□□ -1.42
POLR2J3-213ENST00000508848 ELOF1P60002 83 aaKnown RBP6.21□□□□□ -1.42
POLR2J3-213ENST00000508848 SPAG11AQ6PDA7 123 aa6.21□□□□□ -1.42
POLR2J3-213ENST00000508848 VAMP8Q9BV40 100 aa6.21□□□□□ -1.42
POLR2J3-213ENST00000508848 SSBP3-AS1Q7Z2R9 100 aa6.2□□□□□ -1.42
POLR2J3-213ENST00000508848 ANAPC11Q9NYG5 84 aa6.2□□□□□ -1.42
POLR2J3-213ENST00000508848 A0A1B0GWB2 263 aa6.19□□□□□ -1.42
POLR2J3-213ENST00000508848 ERC2-IT1O76042 136 aa6.19□□□□□ -1.42
POLR2J3-213ENST00000508848 SPRR1BP22528 89 aa6.19□□□□□ -1.42
POLR2J3-213ENST00000508848 TAL2Q16559 108 aa6.19□□□□□ -1.42
POLR2J3-213ENST00000508848 C6orf99Q4VX62 202 aa6.19□□□□□ -1.42
POLR2J3-213ENST00000508848 SPATA45Q537H7 98 aa6.19□□□□□ -1.42
POLR2J3-213ENST00000508848 SLC25A34Q6PIV7 304 aa6.19□□□□□ -1.42
POLR2J3-213ENST00000508848 A6NDN8 102 aa6.18□□□□□ -1.42
POLR2J3-213ENST00000508848 COX7BP24311 80 aa6.18□□□□□ -1.42
POLR2J3-213ENST00000508848 PYY3Q5JQD4 70 aa6.17□□□□□ -1.42
POLR2J3-213ENST00000508848 LINC00304Q8N9R0 145 aa6.17□□□□□ -1.42
POLR2J3-213ENST00000508848 HIST1H4GQ99525 98 aa6.17□□□□□ -1.42
POLR2J3-213ENST00000508848 PAM16Q9Y3D7 125 aa6.17□□□□□ -1.42
POLR2J3-213ENST00000508848 VAMP3Q15836 100 aa6.16□□□□□ -1.42
POLR2J3-213ENST00000508848 SMIM11BQ8TCY0 68 aa6.16□□□□□ -1.42
POLR2J3-213ENST00000508848 C14orf144Q96I85 54 aa6.16□□□□□ -1.42
POLR2J3-213ENST00000508848 C12orf57Q99622 126 aa6.16□□□□□ -1.42
POLR2J3-213ENST00000508848 NHP2Q9NX24 153 aaKnown RBP6.16□□□□□ -1.42
POLR2J3-213ENST00000508848 SPINK1P00995 79 aa6.15□□□□□ -1.42
POLR2J3-213ENST00000508848 RPS29P62273 56 aaKnown RBP6.15□□□□□ -1.42
POLR2J3-213ENST00000508848 GAGE2AQ6NT46 116 aa6.15□□□□□ -1.42
POLR2J3-213ENST00000508848 C2orf91Q6ZV80 131 aa6.14□□□□□ -1.43
POLR2J3-213ENST00000508848 C3orf22Q8N5N4 141 aa6.14□□□□□ -1.43
POLR2J3-213ENST00000508848 IGLV5-48A0A075B6I7 105 aa6.13□□□□□ -1.43
POLR2J3-213ENST00000508848 A0A0B4J2C4 111 aa6.12□□□□□ -1.43
POLR2J3-213ENST00000508848 TEX49A0A1B0GTD5 131 aa6.12□□□□□ -1.43
POLR2J3-213ENST00000508848 CFC1BP0CG36 223 aa6.12□□□□□ -1.43
POLR2J3-213ENST00000508848 CFC1P0CG37 223 aa6.12□□□□□ -1.43
POLR2J3-213ENST00000508848 TMEM238LA0A1B0GVL6 79 aa6.11□□□□□ -1.43
POLR2J3-213ENST00000508848 SLC25A20O43772 301 aa6.11□□□□□ -1.43
POLR2J3-213ENST00000508848 BVES-AS1Q5T3Y7 98 aa6.11□□□□□ -1.43
POLR2J3-213ENST00000508848 LINC00575Q6W349 94 aa6.11□□□□□ -1.43
POLR2J3-213ENST00000508848 CEND1Q8N111 149 aa6.11□□□□□ -1.43
POLR2J3-213ENST00000508848 LRP2P98164 4655 aa6.11□□□□□ -1.43
POLR2J3-213ENST00000508848 ST20-AS1Q8NBB2 130 aa6.1□□□□□ -1.43
POLR2J3-213ENST00000508848 Q8NBF4 154 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms