RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 TENM3Q9P273 2699 aa4.73□□□□□ -1.65
CLCN3-206ENST00000507875 DNAH9Q9NYC9 4486 aa4.73□□□□□ -1.65
CLCN3-206ENST00000507875 COX6A2Q02221 97 aa4.72□□□□□ -1.65
CLCN3-206ENST00000507875 LYPD5Q6UWN5 251 aa4.72□□□□□ -1.65
CLCN3-206ENST00000507875 MUSTN1Q8IVN3 82 aa4.72□□□□□ -1.65
CLCN3-206ENST00000507875 CHTF8P0CG12 524 aa4.72□□□□□ -1.65
CLCN3-206ENST00000507875 PRO1854Q9UHT4 67 aa4.72□□□□□ -1.65
CLCN3-206ENST00000507875 IGLV7-46A0A075B6I9 117 aa4.71□□□□□ -1.65
CLCN3-206ENST00000507875 NUPR2A6NF83 97 aa4.71□□□□□ -1.65
CLCN3-206ENST00000507875 CASC10Q5T4H9 136 aa4.71□□□□□ -1.65
CLCN3-206ENST00000507875 A0A0B4J2C4 111 aa4.71□□□□□ -1.66
CLCN3-206ENST00000507875 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.7□□□□□ -1.66
CLCN3-206ENST00000507875 LOC107984156A0A0G2JMH3 177 aa4.7□□□□□ -1.66
CLCN3-206ENST00000507875 NDUFA1O15239 70 aa4.7□□□□□ -1.66
CLCN3-206ENST00000507875 ARL17AQ8IVW1 177 aa4.7□□□□□ -1.66
CLCN3-206ENST00000507875 Q8N377 158 aa4.7□□□□□ -1.66
CLCN3-206ENST00000507875 CCKP06307 115 aa4.7□□□□□ -1.66
CLCN3-206ENST00000507875 PRR4Q16378 134 aa4.7□□□□□ -1.66
CLCN3-206ENST00000507875 SFTA2Q6UW10 78 aa4.7□□□□□ -1.66
CLCN3-206ENST00000507875 CLEC2BQ92478 149 aa4.7□□□□□ -1.66
CLCN3-206ENST00000507875 MIAQ16674 131 aa4.69□□□□□ -1.66
CLCN3-206ENST00000507875 SCXQ7RTU7 201 aa4.69□□□□□ -1.66
CLCN3-206ENST00000507875 COPS9Q8WXC6 57 aa4.69□□□□□ -1.66
CLCN3-206ENST00000507875 KRTAP9-9Q9BYP9 154 aa4.69□□□□□ -1.66
CLCN3-206ENST00000507875 NBEAL2Q6ZNJ1 2754 aa4.69□□□□□ -1.66
CLCN3-206ENST00000507875 IGHV3-33P01772 117 aa4.69□□□□□ -1.66
CLCN3-206ENST00000507875 CCL18P55774 89 aa4.69□□□□□ -1.66
CLCN3-206ENST00000507875 STAB2Q8WWQ8 2551 aa4.69□□□□□ -1.66
CLCN3-206ENST00000507875 ATOX1O00244 68 aa4.68□□□□□ -1.66
CLCN3-206ENST00000507875 LINC01556Q5JQF7 62 aa4.68□□□□□ -1.66
CLCN3-206ENST00000507875 IGLV8-61A0A075B6I0 122 aa4.67□□□□□ -1.66
CLCN3-206ENST00000507875 IGLV4-60A0A075B6I1 120 aa4.67□□□□□ -1.66
CLCN3-206ENST00000507875 DNAH10OSP0CZ25 163 aa4.67□□□□□ -1.66
CLCN3-206ENST00000507875 ESRGQ1W209 222 aa4.67□□□□□ -1.66
CLCN3-206ENST00000507875 PRR34Q9NV39 138 aa4.67□□□□□ -1.66
CLCN3-206ENST00000507875 KMT2CQ8NEZ4 4911 aaKnown RBP4.67□□□□□ -1.66
CLCN3-206ENST00000507875 A6NN06 94 aa4.67□□□□□ -1.66
CLCN3-206ENST00000507875 ZNF625Q96I27 306 aaPredicted RBP4.67□□□□□ -1.66
CLCN3-206ENST00000507875 APLNQ9ULZ1 77 aa4.67□□□□□ -1.66
CLCN3-206ENST00000507875 LINC00959A0A1B0GUT2 108 aa4.66□□□□□ -1.66
CLCN3-206ENST00000507875 KRTAP16-1A8MUX0 517 aa4.66□□□□□ -1.66
CLCN3-206ENST00000507875 H7C2G1 150 aa4.66□□□□□ -1.66
CLCN3-206ENST00000507875 Q1RN00 199 aa4.66□□□□□ -1.66
CLCN3-206ENST00000507875 SERP2Q8N6R1 65 aa4.66□□□□□ -1.66
CLCN3-206ENST00000507875 HUWE1Q7Z6Z7 4374 aaKnown RBP4.65□□□□□ -1.66
CLCN3-206ENST00000507875 IGKV3OR2-268A0A0C4DH90 116 aa4.65□□□□□ -1.66
CLCN3-206ENST00000507875 TRBV30A0A0K0K1B3 111 aa4.65□□□□□ -1.66
CLCN3-206ENST00000507875 LCE6AA0A183 80 aa4.65□□□□□ -1.66
CLCN3-206ENST00000507875 ANGP03950 147 aaKnown RBP4.65□□□□□ -1.66
CLCN3-206ENST00000507875 LINC00308Q8TCZ7 52 aa4.65□□□□□ -1.66
CLCN3-206ENST00000507875 RMI2Q96E14 147 aa4.65□□□□□ -1.66
CLCN3-206ENST00000507875 CRPP02741 224 aa4.65□□□□□ -1.67
CLCN3-206ENST00000507875 A8MU10 97 aa4.64□□□□□ -1.67
CLCN3-206ENST00000507875 COX7B2Q8TF08 81 aa4.64□□□□□ -1.67
CLCN3-206ENST00000507875 UBE2AP49459 152 aa4.64□□□□□ -1.67
CLCN3-206ENST00000507875 C5orf38Q86SI9 138 aa4.64□□□□□ -1.67
CLCN3-206ENST00000507875 IBA57-AS1B1ANH7 110 aa4.63□□□□□ -1.67
CLCN3-206ENST00000507875 ATXN8Q156A1 80 aa4.63□□□□□ -1.67
CLCN3-206ENST00000507875 WFDC10BQ8IUB3 73 aa4.63□□□□□ -1.67
CLCN3-206ENST00000507875 LINC00269Q8N2A0 174 aa4.63□□□□□ -1.67
CLCN3-206ENST00000507875 COX6CP09669 75 aa4.63□□□□□ -1.67
CLCN3-206ENST00000507875 HIST1H4AP62805 103 aaKnown RBP4.63□□□□□ -1.67
CLCN3-206ENST00000507875 TOMM7Q9P0U1 55 aa4.63□□□□□ -1.67
CLCN3-206ENST00000507875 A0A087WYN8 130 aa4.62□□□□□ -1.67
CLCN3-206ENST00000507875 KLK12Q9UKR0 248 aa4.62□□□□□ -1.67
CLCN3-206ENST00000507875 KRTAP4-16G5E9R7 235 aaPredicted RBP4.62□□□□□ -1.67
CLCN3-206ENST00000507875 SLC25A20O43772 301 aa4.62□□□□□ -1.67
CLCN3-206ENST00000507875 FAM229BQ4G0N7 80 aa4.62□□□□□ -1.67
CLCN3-206ENST00000507875 ENHOQ6UWT2 76 aa4.62□□□□□ -1.67
CLCN3-206ENST00000507875 UBE2DNLQ8IWF7 75 aa4.62□□□□□ -1.67
CLCN3-206ENST00000507875 XCL1P47992 114 aa4.61□□□□□ -1.67
CLCN3-206ENST00000507875 Q8IZM0 81 aa4.61□□□□□ -1.67
CLCN3-206ENST00000507875 RYR3Q15413 4870 aa4.61□□□□□ -1.67
CLCN3-206ENST00000507875 DNAH7Q8WXX0 4024 aa4.6□□□□□ -1.67
CLCN3-206ENST00000507875 CLPSL2Q6UWE3 100 aa4.6□□□□□ -1.67
CLCN3-206ENST00000507875 MIR7-3HGQ8N6C7 128 aa4.6□□□□□ -1.67
CLCN3-206ENST00000507875 C7orf33Q8WU49 177 aa4.6□□□□□ -1.67
CLCN3-206ENST00000507875 TRBV10-2A0A0K0K1G8 114 aa4.6□□□□□ -1.67
CLCN3-206ENST00000507875 LINC00158P58513 81 aa4.6□□□□□ -1.67
CLCN3-206ENST00000507875 SPTSSBQ8NFR3 76 aa4.6□□□□□ -1.67
CLCN3-206ENST00000507875 UBE2WQ96B02 151 aa4.6□□□□□ -1.67
CLCN3-206ENST00000507875 LINC01600Q96MT4 127 aa4.6□□□□□ -1.67
CLCN3-206ENST00000507875 H7BZZ5 65 aa4.59□□□□□ -1.67
CLCN3-206ENST00000507875 KRTAP26-1Q6PEX3 210 aa4.58□□□□□ -1.68
CLCN3-206ENST00000507875 ATP11AUNQ6ZP68 121 aa4.58□□□□□ -1.68
CLCN3-206ENST00000507875 KRTAP19-1Q8IUB9 90 aa4.58□□□□□ -1.68
CLCN3-206ENST00000507875 TENM2Q9NT68 2774 aa4.58□□□□□ -1.68
CLCN3-206ENST00000507875 TRAV13-2A0A0B4J235 113 aa4.58□□□□□ -1.68
CLCN3-206ENST00000507875 LY6G6CO95867 125 aa4.58□□□□□ -1.68
CLCN3-206ENST00000507875 COX17Q14061 63 aa4.58□□□□□ -1.68
CLCN3-206ENST00000507875 RETNLBQ9BQ08 111 aa4.58□□□□□ -1.68
CLCN3-206ENST00000507875 DYNC2H1Q8NCM8 4307 aaKnown RBP4.57□□□□□ -1.68
CLCN3-206ENST00000507875 STARD9Q9P2P6 4700 aa4.57□□□□□ -1.68
CLCN3-206ENST00000507875 IGKV2-28A0A075B6P5 120 aa4.57□□□□□ -1.68
CLCN3-206ENST00000507875 GVQW2A0A096LPI5 108 aaPredicted RBP4.57□□□□□ -1.68
CLCN3-206ENST00000507875 IGKV2D-28P01615 120 aa4.57□□□□□ -1.68
CLCN3-206ENST00000507875 CSMD3Q7Z407 3707 aa4.57□□□□□ -1.68
CLCN3-206ENST00000507875 IGLV10-54A0A075B6I4 117 aa4.56□□□□□ -1.68
CLCN3-206ENST00000507875 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
CLCN3-206ENST00000507875 C2orf82Q6UX34 121 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms