RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 LINC01546A6NGU7 62 aa3.11□□□□□ -1.91
GYPB-208ENST00000507009 KRTAP4-16G5E9R7 235 aaPredicted RBP3.11□□□□□ -1.91
GYPB-208ENST00000507009 IGLV6-57P01721 117 aa3.11□□□□□ -1.91
GYPB-208ENST00000507009 S100PP25815 95 aa3.11□□□□□ -1.91
GYPB-208ENST00000507009 DDTP30046 118 aa3.11□□□□□ -1.91
GYPB-208ENST00000507009 Q6Q795 121 aa3.11□□□□□ -1.91
GYPB-208ENST00000507009 ST20-AS1Q8NBB2 130 aa3.11□□□□□ -1.91
GYPB-208ENST00000507009 Q9BRP9 147 aa3.11□□□□□ -1.91
GYPB-208ENST00000507009 CHTOPQ9Y3Y2 248 aaKnown RBP3.11□□□□□ -1.91
GYPB-208ENST00000507009 A0A096LNJ9 63 aa3.1□□□□□ -1.91
GYPB-208ENST00000507009 HBDP02042 147 aa3.1□□□□□ -1.91
GYPB-208ENST00000507009 LIMD2Q9BT23 127 aa3.1□□□□□ -1.91
GYPB-208ENST00000507009 TMEM223A0PJW6 202 aa3.09□□□□□ -1.91
GYPB-208ENST00000507009 H7C2G1 150 aa3.09□□□□□ -1.91
GYPB-208ENST00000507009 S100A7L2Q5SY68 101 aa3.09□□□□□ -1.91
GYPB-208ENST00000507009 Q6ZRX8 168 aa3.09□□□□□ -1.91
GYPB-208ENST00000507009 H0Y8G0 127 aa3.08□□□□□ -1.92
GYPB-208ENST00000507009 LINC00614P0C842 121 aa3.08□□□□□ -1.92
GYPB-208ENST00000507009 NPC2P61916 151 aa3.08□□□□□ -1.92
GYPB-208ENST00000507009 HERV-K104P63124 156 aa3.08□□□□□ -1.92
GYPB-208ENST00000507009 JOSD1Q15040 202 aaPredicted RBP3.08□□□□□ -1.92
GYPB-208ENST00000507009 URB1-AS1Q96HZ7 61 aa3.08□□□□□ -1.92
GYPB-208ENST00000507009 MIEN1Q9BRT3 115 aa3.08□□□□□ -1.92
GYPB-208ENST00000507009 MAP1LC3CQ9BXW4 147 aa3.08□□□□□ -1.92
GYPB-208ENST00000507009 SEC11CQ9BY50 192 aa3.08□□□□□ -1.92
GYPB-208ENST00000507009 TRAV23DV6A0A075B6W5 121 aa3.07□□□□□ -1.92
GYPB-208ENST00000507009 A0A0A0MQY5 61 aa3.07□□□□□ -1.92
GYPB-208ENST00000507009 MYMXA0A1B0GTQ4 84 aa3.07□□□□□ -1.92
GYPB-208ENST00000507009 USH2AO75445 5202 aa3.06□□□□□ -1.92
GYPB-208ENST00000507009 SSPOA2VEC9 5147 aa3.06□□□□□ -1.92
GYPB-208ENST00000507009 LINC00587B1AMM8 73 aa3.06□□□□□ -1.92
GYPB-208ENST00000507009 Q1RN00 199 aa3.06□□□□□ -1.92
GYPB-208ENST00000507009 DEFB105AQ8NG35 78 aa3.06□□□□□ -1.92
GYPB-208ENST00000507009 C18orf32Q8TCD1 76 aa3.06□□□□□ -1.92
GYPB-208ENST00000507009 RPS10P5Q9NQ39 176 aa3.06□□□□□ -1.92
GYPB-208ENST00000507009 SPANXB1Q9NS25 103 aaPredicted RBP3.06□□□□□ -1.92
GYPB-208ENST00000507009 TRAPPC1Q9Y5R8 145 aa3.06□□□□□ -1.92
GYPB-208ENST00000507009 FLGP20930 4061 aaPredicted RBP3.05□□□□□ -1.92
GYPB-208ENST00000507009 TRBV10-2A0A0K0K1G8 114 aa3.05□□□□□ -1.92
GYPB-208ENST00000507009 ZNF73O43830 326 aaPredicted RBP3.05□□□□□ -1.92
GYPB-208ENST00000507009 HINT1P49773 126 aaPredicted RBP3.05□□□□□ -1.92
GYPB-208ENST00000507009 TSPEAR-AS2P59090 65 aa3.05□□□□□ -1.92
GYPB-208ENST00000507009 RPL37P61927 97 aaKnown RBP3.05□□□□□ -1.92
GYPB-208ENST00000507009 COX19Q49B96 90 aa3.05□□□□□ -1.92
GYPB-208ENST00000507009 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
GYPB-208ENST00000507009 COMMD7Q86VX2 200 aa3.05□□□□□ -1.92
GYPB-208ENST00000507009 OR13C6PQ8NH95 151 aa3.05□□□□□ -1.92
GYPB-208ENST00000507009 IFI27L1Q96BM0 104 aa3.05□□□□□ -1.92
GYPB-208ENST00000507009 LAMTOR3Q9UHA4 124 aa3.05□□□□□ -1.92
GYPB-208ENST00000507009 A0A0G2JQZ4 141 aa3.04□□□□□ -1.92
GYPB-208ENST00000507009 TAL2Q16559 108 aa3.04□□□□□ -1.92
GYPB-208ENST00000507009 SLC25A34Q6PIV7 304 aa3.04□□□□□ -1.92
GYPB-208ENST00000507009 TRAV12-1A0A0B4J245 112 aa3.03□□□□□ -1.92
GYPB-208ENST00000507009 TMEM218A2RU14 115 aa3.03□□□□□ -1.92
GYPB-208ENST00000507009 LEPROTO15243 131 aa3.03□□□□□ -1.92
GYPB-208ENST00000507009 C1orf195Q5TG92 126 aa3.03□□□□□ -1.92
GYPB-208ENST00000507009 PRO1933Q9H354 126 aa3.03□□□□□ -1.92
GYPB-208ENST00000507009 J3QQQ9 107 aa3.02□□□□□ -1.93
GYPB-208ENST00000507009 LGALS3P17931 250 aaKnown RBP3.02□□□□□ -1.93
GYPB-208ENST00000507009 SOSTDC1Q6X4U4 206 aa3.02□□□□□ -1.93
GYPB-208ENST00000507009 PMCHL2Q9BQD1 86 aa3.02□□□□□ -1.93
GYPB-208ENST00000507009 FCGBPQ9Y6R7 5405 aaPredicted RBP3.02□□□□□ -1.93
GYPB-208ENST00000507009 LOC107984156A0A0G2JMH3 177 aa3.01□□□□□ -1.93
GYPB-208ENST00000507009 NDUFC2O95298 119 aa3.01□□□□□ -1.93
GYPB-208ENST00000507009 RHEBQ15382 184 aa3.01□□□□□ -1.93
GYPB-208ENST00000507009 ARL17AQ8IVW1 177 aa3.01□□□□□ -1.93
GYPB-208ENST00000507009 Q8N9P0 234 aaPredicted RBP3.01□□□□□ -1.93
GYPB-208ENST00000507009 MPLKIPQ8TAP9 179 aa3.01□□□□□ -1.93
GYPB-208ENST00000507009 DHRS4-AS1Q9P1J3 65 aa3.01□□□□□ -1.93
GYPB-208ENST00000507009 C5orf52A6NGY3 159 aa3□□□□□ -1.93
GYPB-208ENST00000507009 HSBP1O75506 76 aa3□□□□□ -1.93
GYPB-208ENST00000507009 CFC1P0CG37 223 aa3□□□□□ -1.93
GYPB-208ENST00000507009 SPRR1BP22528 89 aa3□□□□□ -1.93
GYPB-208ENST00000507009 COX7BP24311 80 aa3□□□□□ -1.93
GYPB-208ENST00000507009 AKR1D1P51857 326 aa3□□□□□ -1.93
GYPB-208ENST00000507009 HERVK_113P61574 105 aa3□□□□□ -1.93
GYPB-208ENST00000507009 IFITM2Q01629 132 aa3□□□□□ -1.93
GYPB-208ENST00000507009 CLLU1Q5K131 121 aa3□□□□□ -1.93
GYPB-208ENST00000507009 ADAMTSL4-AS1Q5T5F5 129 aa3□□□□□ -1.93
GYPB-208ENST00000507009 UQCC3Q6UW78 93 aa3□□□□□ -1.93
GYPB-208ENST00000507009 SMIM29Q86T20 159 aa3□□□□□ -1.93
GYPB-208ENST00000507009 PCP2Q8IVA1 136 aa3□□□□□ -1.93
GYPB-208ENST00000507009 CBY1Q9Y3M2 126 aa3□□□□□ -1.93
GYPB-208ENST00000507009 SYNE2Q8WXH0 6885 aaKnown RBP3□□□□□ -1.93
GYPB-208ENST00000507009 MACF1Q9UPN3 7388 aaKnown RBP2.99□□□□□ -1.93
GYPB-208ENST00000507009 TEX49A0A1B0GTD5 131 aa2.99□□□□□ -1.93
GYPB-208ENST00000507009 CD164Q04900 197 aa2.99□□□□□ -1.93
GYPB-208ENST00000507009 C6orf99Q4VX62 202 aa2.99□□□□□ -1.93
GYPB-208ENST00000507009 ATP11AUNQ6ZP68 121 aa2.99□□□□□ -1.93
GYPB-208ENST00000507009 CHCHD1Q96BP2 118 aaKnown RBP2.99□□□□□ -1.93
GYPB-208ENST00000507009 A0A0J9YXY3 114 aa2.98□□□□□ -1.93
GYPB-208ENST00000507009 DPM2O94777 84 aa2.98□□□□□ -1.93
GYPB-208ENST00000507009 TCL1BO95988 128 aa2.98□□□□□ -1.93
GYPB-208ENST00000507009 FABP4P15090 132 aa2.98□□□□□ -1.93
GYPB-208ENST00000507009 PLNP26678 52 aa2.98□□□□□ -1.93
GYPB-208ENST00000507009 NMUP48645 174 aa2.98□□□□□ -1.93
GYPB-208ENST00000507009 PET117Q6UWS5 81 aa2.98□□□□□ -1.93
GYPB-208ENST00000507009 OBSCN-AS1Q96MR7 158 aa2.98□□□□□ -1.93
GYPB-208ENST00000507009 LEPROTL1O95214 131 aa2.97□□□□□ -1.93
GYPB-208ENST00000507009 IGKCP01834 107 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms