RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 IGLV6-57P01721 117 aa5.93□□□□□ -1.46
TPM3-218ENST00000505010 SCGB1C2P0DMR2 95 aa5.93□□□□□ -1.46
TPM3-218ENST00000505010 VAMP3Q15836 100 aa5.93□□□□□ -1.46
TPM3-218ENST00000505010 LYRM7Q5U5X0 104 aa5.93□□□□□ -1.46
TPM3-218ENST00000505010 KRTAP7-1Q8IUC3 87 aa5.93□□□□□ -1.46
TPM3-218ENST00000505010 SMIM11BQ8TCY0 68 aa5.93□□□□□ -1.46
TPM3-218ENST00000505010 SPACA4Q8TDM5 124 aa5.93□□□□□ -1.46
TPM3-218ENST00000505010 DPH3Q96FX2 82 aa5.93□□□□□ -1.46
TPM3-218ENST00000505010 C22orf24Q9Y442 160 aa5.93□□□□□ -1.46
TPM3-218ENST00000505010 FLG2Q5D862 2391 aaPredicted RBP5.93□□□□□ -1.46
TPM3-218ENST00000505010 HMCN2Q8NDA2 5059 aa5.92□□□□□ -1.46
TPM3-218ENST00000505010 TRAV23DV6A0A075B6W5 121 aa5.92□□□□□ -1.46
TPM3-218ENST00000505010 A0A1W2PNN7 141 aa5.92□□□□□ -1.46
TPM3-218ENST00000505010 J3QL48 77 aa5.92□□□□□ -1.46
TPM3-218ENST00000505010 RPL28P46779 137 aaKnown RBP5.92□□□□□ -1.46
TPM3-218ENST00000505010 Q5VSD8 79 aa5.92□□□□□ -1.46
TPM3-218ENST00000505010 MRPL55Q7Z7F7 128 aaKnown RBP5.92□□□□□ -1.46
TPM3-218ENST00000505010 SPCS1Q9Y6A9 102 aa5.92□□□□□ -1.46
TPM3-218ENST00000505010 RPL37AP8A6NKH3 93 aa5.91□□□□□ -1.46
TPM3-218ENST00000505010 COX6CP09669 75 aa5.91□□□□□ -1.46
TPM3-218ENST00000505010 K7EP34 96 aa5.9□□□□□ -1.46
TPM3-218ENST00000505010 C6orf99Q4VX62 202 aa5.9□□□□□ -1.46
TPM3-218ENST00000505010 LINC00167Q96N53 147 aa5.9□□□□□ -1.46
TPM3-218ENST00000505010 CBY1Q9Y3M2 126 aa5.9□□□□□ -1.46
TPM3-218ENST00000505010 PRYO14603 147 aa5.89□□□□□ -1.47
TPM3-218ENST00000505010 PHF5AQ7RTV0 110 aaKnown RBP5.89□□□□□ -1.47
TPM3-218ENST00000505010 CLEC2BQ92478 149 aa5.89□□□□□ -1.47
TPM3-218ENST00000505010 DIRC1Q969H9 104 aa5.89□□□□□ -1.47
TPM3-218ENST00000505010 A0A087WYN8 130 aa5.88□□□□□ -1.47
TPM3-218ENST00000505010 ZNF73O43830 326 aaPredicted RBP5.88□□□□□ -1.47
TPM3-218ENST00000505010 TCL1BO95988 128 aa5.88□□□□□ -1.47
TPM3-218ENST00000505010 XGP55808 180 aa5.88□□□□□ -1.47
TPM3-218ENST00000505010 KRTAP10-1P60331 282 aa5.88□□□□□ -1.47
TPM3-218ENST00000505010 UBE2BP63146 152 aa5.88□□□□□ -1.47
TPM3-218ENST00000505010 GTF2H5Q6ZYL4 71 aa5.88□□□□□ -1.47
TPM3-218ENST00000505010 DNAH8Q96JB1 4490 aa5.87□□□□□ -1.47
TPM3-218ENST00000505010 IGLV1-50A0A075B6I6 118 aa5.87□□□□□ -1.47
TPM3-218ENST00000505010 KCNQ1DNQ9H478 68 aa5.87□□□□□ -1.47
TPM3-218ENST00000505010 TRBV20-1A0A075B6N2 111 aa5.86□□□□□ -1.47
TPM3-218ENST00000505010 H0YGX0 51 aa5.86□□□□□ -1.47
TPM3-218ENST00000505010 FAM229AH3BQW9 127 aa5.86□□□□□ -1.47
TPM3-218ENST00000505010 COX7BP24311 80 aa5.86□□□□□ -1.47
TPM3-218ENST00000505010 ATXN8Q156A1 80 aa5.86□□□□□ -1.47
TPM3-218ENST00000505010 PLAC8Q9NZF1 115 aa5.86□□□□□ -1.47
TPM3-218ENST00000505010 ETDCA0A1B0GVM5 59 aa5.85□□□□□ -1.47
TPM3-218ENST00000505010 LST1O00453 97 aa5.85□□□□□ -1.47
TPM3-218ENST00000505010 REG3GQ6UW15 175 aa5.85□□□□□ -1.47
TPM3-218ENST00000505010 FAM218AQ96MZ4 157 aa5.85□□□□□ -1.47
TPM3-218ENST00000505010 FAM30AQ9NZY2 134 aa5.85□□□□□ -1.47
TPM3-218ENST00000505010 TRBV7-6A0A0J9YX20 115 aa5.84□□□□□ -1.47
TPM3-218ENST00000505010 H3BMG7 143 aa5.84□□□□□ -1.47
TPM3-218ENST00000505010 SMR3BP02814 79 aaPredicted RBP5.84□□□□□ -1.47
TPM3-218ENST00000505010 ELOF1P60002 83 aaKnown RBP5.83□□□□□ -1.48
TPM3-218ENST00000505010 HAMPP81172 84 aa5.83□□□□□ -1.48
TPM3-218ENST00000505010 UBE2V1Q13404 147 aa5.83□□□□□ -1.48
TPM3-218ENST00000505010 Q6ZSA8 131 aa5.83□□□□□ -1.48
TPM3-218ENST00000505010 SCXQ7RTU7 201 aa5.83□□□□□ -1.48
TPM3-218ENST00000505010 KRTAP11-1Q8IUC1 163 aa5.83□□□□□ -1.48
TPM3-218ENST00000505010 MTURNQ8N3F0 131 aa5.83□□□□□ -1.48
TPM3-218ENST00000505010 C9JAW5 83 aa5.82□□□□□ -1.48
TPM3-218ENST00000505010 DNAL4O96015 105 aa5.82□□□□□ -1.48
TPM3-218ENST00000505010 TRACP01848 142 aa5.82□□□□□ -1.48
TPM3-218ENST00000505010 SPRR1AP35321 89 aa5.82□□□□□ -1.48
TPM3-218ENST00000505010 FAM19A1Q7Z5A9 133 aa5.82□□□□□ -1.48
TPM3-218ENST00000505010 CIRBP-AS1Q8TBR5 109 aa5.82□□□□□ -1.48
TPM3-218ENST00000505010 B5MCH6 92 aa5.81□□□□□ -1.48
TPM3-218ENST00000505010 KRTAP4-16G5E9R7 235 aaPredicted RBP5.81□□□□□ -1.48
TPM3-218ENST00000505010 SLC25A20O43772 301 aa5.81□□□□□ -1.48
TPM3-218ENST00000505010 SNCGO76070 127 aa5.81□□□□□ -1.48
TPM3-218ENST00000505010 LINC00575Q6W349 94 aa5.81□□□□□ -1.48
TPM3-218ENST00000505010 Q6ZRX8 168 aa5.81□□□□□ -1.48
TPM3-218ENST00000505010 LINC00528Q8N1L1 170 aa5.81□□□□□ -1.48
TPM3-218ENST00000505010 hADV29S1A0JD25 119 aa5.8□□□□□ -1.48
TPM3-218ENST00000505010 PRLHP81277 87 aa5.8□□□□□ -1.48
TPM3-218ENST00000505010 RNF213Q63HN8 5207 aa5.8□□□□□ -1.48
TPM3-218ENST00000505010 A0A1B0GX51 115 aa5.79□□□□□ -1.48
TPM3-218ENST00000505010 KRTAP29-1A8MX34 341 aaPredicted RBP5.79□□□□□ -1.48
TPM3-218ENST00000505010 BCE1O60756 84 aa5.79□□□□□ -1.48
TPM3-218ENST00000505010 UBE2AP49459 152 aa5.79□□□□□ -1.48
TPM3-218ENST00000505010 C1orf137Q5JT78 98 aa5.78□□□□□ -1.48
TPM3-218ENST00000505010 Q9BRP9 147 aa5.78□□□□□ -1.48
TPM3-218ENST00000505010 DHRS4-AS1Q9P1J3 65 aa5.78□□□□□ -1.48
TPM3-218ENST00000505010 PSORS1C2Q9UIG4 136 aa5.78□□□□□ -1.48
TPM3-218ENST00000505010 HIGD2AQ9BW72 106 aa5.77□□□□□ -1.49
TPM3-218ENST00000505010 ORMDL1Q9P0S3 153 aa5.77□□□□□ -1.49
TPM3-218ENST00000505010 PRO0461Q9UI25 63 aa5.77□□□□□ -1.49
TPM3-218ENST00000505010 LRP1Q07954 4544 aaKnown RBP5.76□□□□□ -1.49
TPM3-218ENST00000505010 F8W1H4 67 aa5.76□□□□□ -1.49
TPM3-218ENST00000505010 H3BT86 120 aa5.76□□□□□ -1.49
TPM3-218ENST00000505010 SMCPP49901 116 aaPredicted RBP5.76□□□□□ -1.49
TPM3-218ENST00000505010 Q6ZQY7 126 aa5.76□□□□□ -1.49
TPM3-218ENST00000505010 BAALC-AS2P0C853 105 aa5.75□□□□□ -1.49
TPM3-218ENST00000505010 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.75□□□□□ -1.49
TPM3-218ENST00000505010 ANKRD29Q8N6D5 301 aa5.75□□□□□ -1.49
TPM3-218ENST00000505010 SMCR5Q8TEV8 140 aa5.75□□□□□ -1.49
TPM3-218ENST00000505010 H0Y9J4 135 aa5.74□□□□□ -1.49
TPM3-218ENST00000505010 ERC2-IT1O76042 136 aa5.74□□□□□ -1.49
TPM3-218ENST00000505010 FAT3Q8TDW7 4589 aa5.73□□□□□ -1.49
TPM3-218ENST00000505010 PLA2G1BP04054 148 aaKnown RBP5.73□□□□□ -1.49
TPM3-218ENST00000505010 KRTAP13-1Q8IUC0 172 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms