RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 ANKRD17O75179 2603 aaKnown RBP3.92□□□□□ -1.78
LINC02397-201ENST00000504409 A0A1W2PNU3 283 aaPredicted RBP3.92□□□□□ -1.78
LINC02397-201ENST00000504409 ZNF575Q86XF7 245 aa3.91□□□□□ -1.78
LINC02397-201ENST00000504409 SPINK1P00995 79 aa3.91□□□□□ -1.78
LINC02397-201ENST00000504409 HIVEP3Q5T1R4 2406 aa3.9□□□□□ -1.79
LINC02397-201ENST00000504409 C9orf129Q5T035 196 aaKnown RBP3.9□□□□□ -1.79
LINC02397-201ENST00000504409 LINC00472Q9H8W2 130 aa3.89□□□□□ -1.79
LINC02397-201ENST00000504409 PRR26Q8N8Z3 221 aa3.88□□□□□ -1.79
LINC02397-201ENST00000504409 ZNF861PO60384 105 aa3.88□□□□□ -1.79
LINC02397-201ENST00000504409 CYSTM1Q9H1C7 97 aa3.88□□□□□ -1.79
LINC02397-201ENST00000504409 F8P00451 2351 aa3.88□□□□□ -1.79
LINC02397-201ENST00000504409 IGLV5-52A0A0A0MRZ9 124 aa3.88□□□□□ -1.79
LINC02397-201ENST00000504409 MMP24-AS1A0A0U1RRL7 71 aa3.88□□□□□ -1.79
LINC02397-201ENST00000504409 HRES1P13985 223 aa3.88□□□□□ -1.79
LINC02397-201ENST00000504409 FAM208BQ5VWN6 2430 aa3.88□□□□□ -1.79
LINC02397-201ENST00000504409 C19orf73Q9NVV2 129 aa3.87□□□□□ -1.79
LINC02397-201ENST00000504409 A0A096LNI7 61 aa3.87□□□□□ -1.79
LINC02397-201ENST00000504409 A0A096LNT2 108 aa3.87□□□□□ -1.79
LINC02397-201ENST00000504409 KRTAP25-1Q3LHN0 102 aa3.87□□□□□ -1.79
LINC02397-201ENST00000504409 CSAG1Q6PB30 78 aa3.86□□□□□ -1.79
LINC02397-201ENST00000504409 LRRK2Q5S007 2527 aa3.86□□□□□ -1.79
LINC02397-201ENST00000504409 NAV2Q8IVL1 2488 aa3.86□□□□□ -1.79
LINC02397-201ENST00000504409 WDR87Q6ZQQ6 2873 aa3.86□□□□□ -1.79
LINC02397-201ENST00000504409 DEFB116Q30KQ4 102 aa3.85□□□□□ -1.79
LINC02397-201ENST00000504409 KRTAP29-1A8MX34 341 aaPredicted RBP3.85□□□□□ -1.79
LINC02397-201ENST00000504409 PTPN13Q12923 2485 aa3.84□□□□□ -1.79
LINC02397-201ENST00000504409 RPS29P62273 56 aaKnown RBP3.84□□□□□ -1.8
LINC02397-201ENST00000504409 DEFB4AO15263 64 aa3.83□□□□□ -1.8
LINC02397-201ENST00000504409 SONP18583 2426 aaKnown RBP3.83□□□□□ -1.8
LINC02397-201ENST00000504409 RPL37P61927 97 aaKnown RBP3.83□□□□□ -1.8
LINC02397-201ENST00000504409 DOPEY1Q5JWR5 2465 aa3.81□□□□□ -1.8
LINC02397-201ENST00000504409 CACNA1AO00555 2505 aa3.8□□□□□ -1.8
LINC02397-201ENST00000504409 SPINK7P58062 85 aa3.8□□□□□ -1.8
LINC02397-201ENST00000504409 C10orf99Q6UWK7 81 aa3.8□□□□□ -1.8
LINC02397-201ENST00000504409 GIG44P09565 113 aaPredicted RBP3.79□□□□□ -1.8
LINC02397-201ENST00000504409 NBDYA0A0U1RRE5 68 aa3.78□□□□□ -1.8
LINC02397-201ENST00000504409 RTL8CO15255 209 aa3.78□□□□□ -1.8
LINC02397-201ENST00000504409 Q96NJ1 140 aa3.78□□□□□ -1.8
LINC02397-201ENST00000504409 KMT2BQ9UMN6 2715 aaPredicted RBP3.78□□□□□ -1.8
LINC02397-201ENST00000504409 PP632Q6XCG6 107 aa3.78□□□□□ -1.8
LINC02397-201ENST00000504409 H1FX-AS1Q4G0G2 97 aa3.77□□□□□ -1.81
LINC02397-201ENST00000504409 CHD8Q9HCK8 2581 aa3.77□□□□□ -1.81
LINC02397-201ENST00000504409 TYMSOSQ8TAI1 123 aa3.77□□□□□ -1.81
LINC02397-201ENST00000504409 C18orf65Q6ZTR6 163 aa3.77□□□□□ -1.81
LINC02397-201ENST00000504409 ZNF462Q96JM2 2506 aa3.76□□□□□ -1.81
LINC02397-201ENST00000504409 PLAC8Q9NZF1 115 aa3.76□□□□□ -1.81
LINC02397-201ENST00000504409 MYO18BQ8IUG5 2567 aa3.76□□□□□ -1.81
LINC02397-201ENST00000504409 PIEZO1Q92508 2521 aa3.75□□□□□ -1.81
LINC02397-201ENST00000504409 NCOR2Q9Y618 2525 aa3.75□□□□□ -1.81
LINC02397-201ENST00000504409 KRTAP4-16G5E9R7 235 aaPredicted RBP3.75□□□□□ -1.81
LINC02397-201ENST00000504409 FN1P02751 2386 aaKnown RBP3.75□□□□□ -1.81
LINC02397-201ENST00000504409 LINC00304Q8N9R0 145 aa3.75□□□□□ -1.81
LINC02397-201ENST00000504409 APLNQ9ULZ1 77 aa3.75□□□□□ -1.81
LINC02397-201ENST00000504409 MAPK1IP1LQ8NDC0 245 aa3.74□□□□□ -1.81
LINC02397-201ENST00000504409 Q5W150 140 aa3.74□□□□□ -1.81
LINC02397-201ENST00000504409 M0QZ58 72 aa3.73□□□□□ -1.81
LINC02397-201ENST00000504409 MUC6Q6W4X9 2439 aa3.73□□□□□ -1.81
LINC02397-201ENST00000504409 USP9XQ93008 2570 aaPredicted RBP3.73□□□□□ -1.81
LINC02397-201ENST00000504409 SPACA4Q8TDM5 124 aa3.72□□□□□ -1.81
LINC02397-201ENST00000504409 PRAC1Q96KF2 57 aa3.72□□□□□ -1.81
LINC02397-201ENST00000504409 CEP295Q9C0D2 2601 aa3.71□□□□□ -1.82
LINC02397-201ENST00000504409 ANKRD11Q6UB99 2663 aaPredicted RBP3.71□□□□□ -1.82
LINC02397-201ENST00000504409 KRTAP26-1Q6PEX3 210 aa3.71□□□□□ -1.82
LINC02397-201ENST00000504409 PANO1I0J062 215 aa3.7□□□□□ -1.82
LINC02397-201ENST00000504409 ABCA12Q86UK0 2595 aa3.7□□□□□ -1.82
LINC02397-201ENST00000504409 CASC10Q5T4H9 136 aa3.7□□□□□ -1.82
LINC02397-201ENST00000504409 A0A1W2PPR1 153 aa3.69□□□□□ -1.82
LINC02397-201ENST00000504409 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.69□□□□□ -1.82
LINC02397-201ENST00000504409 PKD1L2Q7Z442 2459 aa3.69□□□□□ -1.82
LINC02397-201ENST00000504409 FAM168BA1KXE4 195 aa3.69□□□□□ -1.82
LINC02397-201ENST00000504409 CCDC168Q8NDH2 2452 aa3.68□□□□□ -1.82
LINC02397-201ENST00000504409 PIEZO2Q9H5I5 2752 aa3.68□□□□□ -1.82
LINC02397-201ENST00000504409 A0A0G2JQZ4 141 aa3.67□□□□□ -1.82
LINC02397-201ENST00000504409 TTC28Q96AY4 2481 aa3.67□□□□□ -1.82
LINC02397-201ENST00000504409 C20orf166-AS1Q96NR2 134 aa3.67□□□□□ -1.82
LINC02397-201ENST00000504409 NOTCH2Q04721 2471 aa3.66□□□□□ -1.82
LINC02397-201ENST00000504409 PSORS1C2Q9UIG4 136 aa3.66□□□□□ -1.82
LINC02397-201ENST00000504409 JMJD1CQ15652 2540 aa3.66□□□□□ -1.82
LINC02397-201ENST00000504409 USP9YO00507 2555 aaPredicted RBP3.66□□□□□ -1.82
LINC02397-201ENST00000504409 A8MUU9 505 aa3.65□□□□□ -1.83
LINC02397-201ENST00000504409 A0A1W2PNN7 141 aa3.65□□□□□ -1.83
LINC02397-201ENST00000504409 S4R3F8 94 aa3.65□□□□□ -1.83
LINC02397-201ENST00000504409 PLAC4Q8WY50 150 aa3.64□□□□□ -1.83
LINC02397-201ENST00000504409 CENPEQ02224 2701 aa3.64□□□□□ -1.83
LINC02397-201ENST00000504409 WWC2-AS2Q96NR7 200 aa3.62□□□□□ -1.83
LINC02397-201ENST00000504409 A0A087WTM6 91 aa3.62□□□□□ -1.83
LINC02397-201ENST00000504409 KRTAP11-1Q8IUC1 163 aa3.62□□□□□ -1.83
LINC02397-201ENST00000504409 MTORP42345 2549 aa3.6□□□□□ -1.83
LINC02397-201ENST00000504409 FASNP49327 2511 aaKnown RBP3.59□□□□□ -1.83
LINC02397-201ENST00000504409 SPTBN4Q9H254 2564 aa3.59□□□□□ -1.84
LINC02397-201ENST00000504409 ZFHX2Q9C0A1 2572 aaPredicted RBP3.58□□□□□ -1.84
LINC02397-201ENST00000504409 ADM2Q7Z4H4 148 aa3.58□□□□□ -1.84
LINC02397-201ENST00000504409 Q8NDZ9 215 aa3.58□□□□□ -1.84
LINC02397-201ENST00000504409 BDP1A6H8Y1 2624 aa3.58□□□□□ -1.84
LINC02397-201ENST00000504409 BPTFQ12830 3046 aa3.57□□□□□ -1.84
LINC02397-201ENST00000504409 ZFYVE26Q68DK2 2539 aa3.57□□□□□ -1.84
LINC02397-201ENST00000504409 SETD2Q9BYW2 2564 aaPredicted RBP3.57□□□□□ -1.84
LINC02397-201ENST00000504409 Q8N1X5 172 aa3.56□□□□□ -1.84
LINC02397-201ENST00000504409 ACANP16112 2415 aa3.56□□□□□ -1.84
LINC02397-201ENST00000504409 POLQO75417 2590 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms