RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 H3BQ85 93 aa5.15□□□□□ -1.59
TOPBP1-202ENST00000503338 CHTF8P0CG12 524 aa5.15□□□□□ -1.59
TOPBP1-202ENST00000503338 COX7BP24311 80 aa5.15□□□□□ -1.59
TOPBP1-202ENST00000503338 ELOF1P60002 83 aaKnown RBP5.15□□□□□ -1.59
TOPBP1-202ENST00000503338 LINC01620Q4KN68 170 aa5.15□□□□□ -1.59
TOPBP1-202ENST00000503338 CLEC2BQ92478 149 aa5.15□□□□□ -1.59
TOPBP1-202ENST00000503338 INAFM2P0DMQ5 153 aa5.14□□□□□ -1.59
TOPBP1-202ENST00000503338 SPRR1AP35321 89 aa5.14□□□□□ -1.59
TOPBP1-202ENST00000503338 UBE2BP63146 152 aa5.14□□□□□ -1.59
TOPBP1-202ENST00000503338 LCE2AQ5TA79 106 aaPredicted RBP5.14□□□□□ -1.59
TOPBP1-202ENST00000503338 KRTAP7-1Q8IUC3 87 aa5.14□□□□□ -1.59
TOPBP1-202ENST00000503338 PLAC8Q9NZF1 115 aa5.14□□□□□ -1.59
TOPBP1-202ENST00000503338 A0A087WYN8 130 aa5.13□□□□□ -1.59
TOPBP1-202ENST00000503338 ETDCA0A1B0GVM5 59 aa5.13□□□□□ -1.59
TOPBP1-202ENST00000503338 hADV29S1A0JD25 119 aa5.13□□□□□ -1.59
TOPBP1-202ENST00000503338 RPL37AP8A6NKH3 93 aa5.13□□□□□ -1.59
TOPBP1-202ENST00000503338 C9JAW5 83 aa5.13□□□□□ -1.59
TOPBP1-202ENST00000503338 H3BT86 120 aa5.13□□□□□ -1.59
TOPBP1-202ENST00000503338 KRTAP10-2P60368 255 aa5.13□□□□□ -1.59
TOPBP1-202ENST00000503338 OCIAD2Q56VL3 154 aa5.13□□□□□ -1.59
TOPBP1-202ENST00000503338 REG3GQ6UW15 175 aa5.13□□□□□ -1.59
TOPBP1-202ENST00000503338 LINC00575Q6W349 94 aa5.13□□□□□ -1.59
TOPBP1-202ENST00000503338 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.13□□□□□ -1.59
TOPBP1-202ENST00000503338 LINC01600Q96MT4 127 aa5.12□□□□□ -1.59
TOPBP1-202ENST00000503338 FAM218AQ96MZ4 157 aa5.12□□□□□ -1.59
TOPBP1-202ENST00000503338 DHRS4-AS1Q9P1J3 65 aa5.12□□□□□ -1.59
TOPBP1-202ENST00000503338 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.11□□□□□ -1.59
TOPBP1-202ENST00000503338 Q6ZRX8 168 aa5.11□□□□□ -1.59
TOPBP1-202ENST00000503338 Q6ZSA8 131 aa5.11□□□□□ -1.59
TOPBP1-202ENST00000503338 PHF5AQ7RTV0 110 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-202ENST00000503338 ANKRD29Q8N6D5 301 aa5.11□□□□□ -1.59
TOPBP1-202ENST00000503338 ORMDL1Q9P0S3 153 aa5.11□□□□□ -1.59
TOPBP1-202ENST00000503338 PRO0461Q9UI25 63 aa5.11□□□□□ -1.59
TOPBP1-202ENST00000503338 B5MCH6 92 aa5.1□□□□□ -1.59
TOPBP1-202ENST00000503338 KRTAP4-16G5E9R7 235 aaPredicted RBP5.1□□□□□ -1.59
TOPBP1-202ENST00000503338 H0Y9J4 135 aa5.1□□□□□ -1.59
TOPBP1-202ENST00000503338 PANO1I0J062 215 aa5.1□□□□□ -1.59
TOPBP1-202ENST00000503338 TMEM256-PLSCR3K7ERE1 68 aa5.1□□□□□ -1.59
TOPBP1-202ENST00000503338 BAALC-AS2P0C853 105 aa5.09□□□□□ -1.59
TOPBP1-202ENST00000503338 FUSP35637 526 aaKnown RBP eCLIP5.09□□□□□ -1.59
TOPBP1-202ENST00000503338 BCE1O60756 84 aa5.08□□□□□ -1.6
TOPBP1-202ENST00000503338 LORP23490 312 aaPredicted RBP5.08□□□□□ -1.6
TOPBP1-202ENST00000503338 FAM19A1Q7Z5A9 133 aa5.08□□□□□ -1.6
TOPBP1-202ENST00000503338 PPDPFLQ8WWR9 84 aa5.08□□□□□ -1.6
TOPBP1-202ENST00000503338 DNAH10Q8IVF4 4471 aa5.07□□□□□ -1.6
TOPBP1-202ENST00000503338 LOC100996750A0A140TA64 210 aa5.07□□□□□ -1.6
TOPBP1-202ENST00000503338 A0A1B0GVY2 172 aa5.07□□□□□ -1.6
TOPBP1-202ENST00000503338 UBE2AP49459 152 aa5.07□□□□□ -1.6
TOPBP1-202ENST00000503338 KRTAP10-1P60331 282 aa5.07□□□□□ -1.6
TOPBP1-202ENST00000503338 Q6ZQY7 126 aa5.07□□□□□ -1.6
TOPBP1-202ENST00000503338 TEN1Q86WV5 123 aa5.07□□□□□ -1.6
TOPBP1-202ENST00000503338 KRTAP4-6Q9BYQ5 205 aa5.07□□□□□ -1.6
TOPBP1-202ENST00000503338 MTURNQ8N3F0 131 aa5.06□□□□□ -1.6
TOPBP1-202ENST00000503338 CIRBP-AS1Q8TBR5 109 aa5.06□□□□□ -1.6
TOPBP1-202ENST00000503338 JMJD7-PLA2G4BH0Y9G9 81 aa5.05□□□□□ -1.6
TOPBP1-202ENST00000503338 J3QR89 54 aa5.05□□□□□ -1.6
TOPBP1-202ENST00000503338 C21orf62-AS1Q17RA5 79 aa5.05□□□□□ -1.6
TOPBP1-202ENST00000503338 ETDBQ3ZM63 59 aa5.05□□□□□ -1.6
TOPBP1-202ENST00000503338 SCXQ7RTU7 201 aa5.05□□□□□ -1.6
TOPBP1-202ENST00000503338 Q9BRP9 147 aa5.05□□□□□ -1.6
TOPBP1-202ENST00000503338 FAM30AQ9NZY2 134 aa5.05□□□□□ -1.6
TOPBP1-202ENST00000503338 PRLHP81277 87 aa5.03□□□□□ -1.6
TOPBP1-202ENST00000503338 KRTAP11-1Q8IUC1 163 aa5.03□□□□□ -1.6
TOPBP1-202ENST00000503338 SMCR5Q8TEV8 140 aa5.03□□□□□ -1.6
TOPBP1-202ENST00000503338 PSORS1C2Q9UIG4 136 aa5.03□□□□□ -1.6
TOPBP1-202ENST00000503338 IGLV5-48A0A075B6I7 105 aa5.02□□□□□ -1.61
TOPBP1-202ENST00000503338 TEX49A0A1B0GTD5 131 aa5.02□□□□□ -1.61
TOPBP1-202ENST00000503338 K7ERU9 68 aa5.02□□□□□ -1.61
TOPBP1-202ENST00000503338 ZNF861PO60384 105 aa5.02□□□□□ -1.61
TOPBP1-202ENST00000503338 C1orf137Q5JT78 98 aa5.02□□□□□ -1.61
TOPBP1-202ENST00000503338 KRTAP13-1Q8IUC0 172 aa5.02□□□□□ -1.61
TOPBP1-202ENST00000503338 HIGD2AQ9BW72 106 aa5.02□□□□□ -1.61
TOPBP1-202ENST00000503338 LAMTOR3Q9UHA4 124 aa5.02□□□□□ -1.61
TOPBP1-202ENST00000503338 ZNF706Q9Y5V0 76 aaPredicted RBP5.02□□□□□ -1.61
TOPBP1-202ENST00000503338 DNAH17Q9UFH2 4485 aa5.01□□□□□ -1.61
TOPBP1-202ENST00000503338 FRAS1Q86XX4 4008 aa5.01□□□□□ -1.61
TOPBP1-202ENST00000503338 DNAH2Q9P225 4427 aa5.01□□□□□ -1.61
TOPBP1-202ENST00000503338 PDE6GP18545 87 aa5.01□□□□□ -1.61
TOPBP1-202ENST00000503338 OBSCN-AS1Q96MR7 158 aa5.01□□□□□ -1.61
TOPBP1-202ENST00000503338 HECTD4Q9Y4D8 3996 aa5□□□□□ -1.61
TOPBP1-202ENST00000503338 IGLV7-43P04211 117 aa5□□□□□ -1.61
TOPBP1-202ENST00000503338 RBM3P98179 157 aaKnown RBP5□□□□□ -1.61
TOPBP1-202ENST00000503338 ERC2-IT1O76042 136 aa4.99□□□□□ -1.61
TOPBP1-202ENST00000503338 NDUFV3P56181 108 aaKnown RBP4.99□□□□□ -1.61
TOPBP1-202ENST00000503338 LINC01547P58512 204 aaPredicted RBP4.99□□□□□ -1.61
TOPBP1-202ENST00000503338 Q8N377 158 aa4.99□□□□□ -1.61
TOPBP1-202ENST00000503338 DEFB105AQ8NG35 78 aa4.99□□□□□ -1.61
TOPBP1-202ENST00000503338 F8WEM9 126 aa4.98□□□□□ -1.61
TOPBP1-202ENST00000503338 SPRR1BP22528 89 aa4.98□□□□□ -1.61
TOPBP1-202ENST00000503338 DSCR8Q96T75 97 aa4.98□□□□□ -1.61
TOPBP1-202ENST00000503338 HYDINQ4G0P3 5121 aa4.98□□□□□ -1.61
TOPBP1-202ENST00000503338 SACSQ9NZJ4 4579 aa4.98□□□□□ -1.61
TOPBP1-202ENST00000503338 ST20-AS1Q8NBB2 130 aa4.97□□□□□ -1.61
TOPBP1-202ENST00000503338 LOC110117498A0A087WWA1 95 aa4.96□□□□□ -1.62
TOPBP1-202ENST00000503338 FAM240AA0A1B0GVK7 77 aa4.96□□□□□ -1.62
TOPBP1-202ENST00000503338 FAM229AH3BQW9 127 aa4.96□□□□□ -1.62
TOPBP1-202ENST00000503338 ACYP1P07311 99 aa4.96□□□□□ -1.62
TOPBP1-202ENST00000503338 XGP55808 180 aa4.96□□□□□ -1.62
TOPBP1-202ENST00000503338 RPL37AP61513 92 aaKnown RBP4.95□□□□□ -1.62
TOPBP1-202ENST00000503338 LINC00483Q53H64 154 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms