RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 KRTAP1-4P0C5Y4 121 aa6.77□□□□□ -1.33
ERCC8-208ENST00000497892 SNRPEP62304 92 aaKnown RBP6.77□□□□□ -1.33
ERCC8-208ENST00000497892 ADAMTSL4-AS1Q5T5F5 129 aa6.77□□□□□ -1.33
ERCC8-208ENST00000497892 LITAFQ99732 161 aa6.77□□□□□ -1.33
ERCC8-208ENST00000497892 TTTY13Q9BZ97 58 aa6.77□□□□□ -1.33
ERCC8-208ENST00000497892 C5orf52A6NGY3 159 aa6.76□□□□□ -1.33
ERCC8-208ENST00000497892 KRTAP10-8P60410 259 aa6.76□□□□□ -1.33
ERCC8-208ENST00000497892 SOSTDC1Q6X4U4 206 aa6.76□□□□□ -1.33
ERCC8-208ENST00000497892 TRBV10-2A0A0K0K1G8 114 aa6.75□□□□□ -1.33
ERCC8-208ENST00000497892 NDUFC2O95298 119 aa6.75□□□□□ -1.33
ERCC8-208ENST00000497892 UBE2AP49459 152 aa6.75□□□□□ -1.33
ERCC8-208ENST00000497892 PRLHP81277 87 aa6.75□□□□□ -1.33
ERCC8-208ENST00000497892 SPANXB1Q9NS25 103 aaPredicted RBP6.75□□□□□ -1.33
ERCC8-208ENST00000497892 TRBV10-3A0A0K0K1G6 114 aa6.74□□□□□ -1.33
ERCC8-208ENST00000497892 PRYO14603 147 aa6.74□□□□□ -1.33
ERCC8-208ENST00000497892 FAM19A1Q7Z5A9 133 aa6.74□□□□□ -1.33
ERCC8-208ENST00000497892 KCNQ1DNQ9H478 68 aa6.74□□□□□ -1.33
ERCC8-208ENST00000497892 SPRR1AP35321 89 aa6.73□□□□□ -1.33
ERCC8-208ENST00000497892 NPC2P61916 151 aa6.73□□□□□ -1.33
ERCC8-208ENST00000497892 PCP2Q8IVA1 136 aa6.72□□□□□ -1.33
ERCC8-208ENST00000497892 PRR26Q8N8Z3 221 aa6.72□□□□□ -1.33
ERCC8-208ENST00000497892 LINC00308Q8TCZ7 52 aa6.72□□□□□ -1.33
ERCC8-208ENST00000497892 KRTAP4-16G5E9R7 235 aaPredicted RBP6.71□□□□□ -1.34
ERCC8-208ENST00000497892 IGLV6-57P01721 117 aa6.71□□□□□ -1.34
ERCC8-208ENST00000497892 DDTP30046 118 aa6.71□□□□□ -1.34
ERCC8-208ENST00000497892 SCGB1D4Q6XE38 83 aa6.71□□□□□ -1.34
ERCC8-208ENST00000497892 LINC00337Q8N6G1 96 aa6.71□□□□□ -1.34
ERCC8-208ENST00000497892 SPANXCQ9NY87 97 aa6.71□□□□□ -1.34
ERCC8-208ENST00000497892 HSBP1L1C9JCN9 74 aa6.7□□□□□ -1.34
ERCC8-208ENST00000497892 S100A12P80511 92 aa6.7□□□□□ -1.34
ERCC8-208ENST00000497892 SPANXDQ9BXN6 97 aa6.7□□□□□ -1.34
ERCC8-208ENST00000497892 HMCN2Q8NDA2 5059 aa6.69□□□□□ -1.34
ERCC8-208ENST00000497892 RPL13AP40429 203 aaKnown RBP6.69□□□□□ -1.34
ERCC8-208ENST00000497892 S100A7L2Q5SY68 101 aa6.69□□□□□ -1.34
ERCC8-208ENST00000497892 ETDCA0A1B0GVM5 59 aa6.68□□□□□ -1.34
ERCC8-208ENST00000497892 SCGB1D1O95968 90 aa6.68□□□□□ -1.34
ERCC8-208ENST00000497892 HIGD2AQ9BW72 106 aa6.68□□□□□ -1.34
ERCC8-208ENST00000497892 PPDPFQ9H3Y8 114 aa6.68□□□□□ -1.34
ERCC8-208ENST00000497892 TRAV23DV6A0A075B6W5 121 aa6.67□□□□□ -1.34
ERCC8-208ENST00000497892 A0A087X002 238 aa6.67□□□□□ -1.34
ERCC8-208ENST00000497892 Q6ZVH6 145 aa6.67□□□□□ -1.34
ERCC8-208ENST00000497892 B5MCH6 92 aa6.66□□□□□ -1.34
ERCC8-208ENST00000497892 CRYGAP11844 174 aa6.66□□□□□ -1.34
ERCC8-208ENST00000497892 IFITM1P13164 125 aa6.66□□□□□ -1.34
ERCC8-208ENST00000497892 FAM229BQ4G0N7 80 aa6.66□□□□□ -1.34
ERCC8-208ENST00000497892 COPS9Q8WXC6 57 aa6.66□□□□□ -1.34
ERCC8-208ENST00000497892 Q6ZRX8 168 aa6.65□□□□□ -1.34
ERCC8-208ENST00000497892 KRTAP9-8Q9BYQ0 159 aa6.65□□□□□ -1.34
ERCC8-208ENST00000497892 CBY1Q9Y3M2 126 aa6.65□□□□□ -1.34
ERCC8-208ENST00000497892 ZNF73O43830 326 aaPredicted RBP6.64□□□□□ -1.35
ERCC8-208ENST00000497892 LINC00518Q8N0U6 118 aa6.64□□□□□ -1.35
ERCC8-208ENST00000497892 SMCR5Q8TEV8 140 aa6.64□□□□□ -1.35
ERCC8-208ENST00000497892 SPRR4Q96PI1 79 aa6.64□□□□□ -1.35
ERCC8-208ENST00000497892 ANAPC11Q9NYG5 84 aa6.64□□□□□ -1.35
ERCC8-208ENST00000497892 OR13C6PQ8NH95 151 aa6.63□□□□□ -1.35
ERCC8-208ENST00000497892 ZNF706Q9Y5V0 76 aaPredicted RBP6.63□□□□□ -1.35
ERCC8-208ENST00000497892 KRTAP13-2Q52LG2 175 aa6.62□□□□□ -1.35
ERCC8-208ENST00000497892 MUSTN1Q8IVN3 82 aa6.62□□□□□ -1.35
ERCC8-208ENST00000497892 Q9BRP9 147 aa6.62□□□□□ -1.35
ERCC8-208ENST00000497892 COX8AP10176 69 aa6.61□□□□□ -1.35
ERCC8-208ENST00000497892 JOSD1Q15040 202 aaPredicted RBP6.61□□□□□ -1.35
ERCC8-208ENST00000497892 TYMSOSQ8TAI1 123 aa6.61□□□□□ -1.35
ERCC8-208ENST00000497892 TMA7Q9Y2S6 64 aaKnown RBP6.6□□□□□ -1.35
ERCC8-208ENST00000497892 DLEU1O43261 78 aa6.59□□□□□ -1.35
ERCC8-208ENST00000497892 ERC2-IT1O76042 136 aa6.59□□□□□ -1.35
ERCC8-208ENST00000497892 LINC00483Q53H64 154 aa6.59□□□□□ -1.35
ERCC8-208ENST00000497892 VAMP8Q9BV40 100 aa6.59□□□□□ -1.35
ERCC8-208ENST00000497892 PAM16Q9Y3D7 125 aa6.59□□□□□ -1.35
ERCC8-208ENST00000497892 HINT1P49773 126 aaPredicted RBP6.58□□□□□ -1.36
ERCC8-208ENST00000497892 SPATA45Q537H7 98 aa6.58□□□□□ -1.36
ERCC8-208ENST00000497892 A6NDN8 102 aa6.57□□□□□ -1.36
ERCC8-208ENST00000497892 ELOF1P60002 83 aaKnown RBP6.57□□□□□ -1.36
ERCC8-208ENST00000497892 C6orf99Q4VX62 202 aa6.57□□□□□ -1.36
ERCC8-208ENST00000497892 TRAV13-2A0A0B4J235 113 aa6.56□□□□□ -1.36
ERCC8-208ENST00000497892 A4D1N5 150 aa6.56□□□□□ -1.36
ERCC8-208ENST00000497892 PYY3Q5JQD4 70 aa6.56□□□□□ -1.36
ERCC8-208ENST00000497892 C3orf22Q8N5N4 141 aa6.56□□□□□ -1.36
ERCC8-208ENST00000497892 C14orf144Q96I85 54 aa6.56□□□□□ -1.36
ERCC8-208ENST00000497892 TRBV7-6A0A0J9YX20 115 aa6.55□□□□□ -1.36
ERCC8-208ENST00000497892 COX7BP24311 80 aa6.55□□□□□ -1.36
ERCC8-208ENST00000497892 GAGE2AQ6NT46 116 aa6.55□□□□□ -1.36
ERCC8-208ENST00000497892 LINC00304Q8N9R0 145 aa6.55□□□□□ -1.36
ERCC8-208ENST00000497892 HIST1H4GQ99525 98 aa6.55□□□□□ -1.36
ERCC8-208ENST00000497892 DHRS4-AS1Q9P1J3 65 aa6.55□□□□□ -1.36
ERCC8-208ENST00000497892 SLC25A34Q6PIV7 304 aa6.54□□□□□ -1.36
ERCC8-208ENST00000497892 HIGD1BQ9P298 99 aa6.54□□□□□ -1.36
ERCC8-208ENST00000497892 A0A1B0GWB2 263 aa6.53□□□□□ -1.36
ERCC8-208ENST00000497892 C2orf91Q6ZV80 131 aa6.53□□□□□ -1.36
ERCC8-208ENST00000497892 ST20-AS1Q8NBB2 130 aa6.53□□□□□ -1.36
ERCC8-208ENST00000497892 TSPAN13O95857 204 aa6.52□□□□□ -1.37
ERCC8-208ENST00000497892 C21orf62-AS1Q17RA5 79 aa6.52□□□□□ -1.37
ERCC8-208ENST00000497892 SMIM11BQ8TCY0 68 aa6.52□□□□□ -1.37
ERCC8-208ENST00000497892 LRP2P98164 4655 aa6.52□□□□□ -1.37
ERCC8-208ENST00000497892 UBR4Q5T4S7 5183 aa6.51□□□□□ -1.37
ERCC8-208ENST00000497892 CTAG1AP78358 180 aa6.51□□□□□ -1.37
ERCC8-208ENST00000497892 KRTAP23-1A1A580 65 aa6.5□□□□□ -1.37
ERCC8-208ENST00000497892 SPRR1BP22528 89 aa6.5□□□□□ -1.37
ERCC8-208ENST00000497892 MOBPQ13875 183 aa6.5□□□□□ -1.37
ERCC8-208ENST00000497892 Q8NBF4 154 aa6.5□□□□□ -1.37
ERCC8-208ENST00000497892 C12orf57Q99622 126 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms